Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
TCRBV9S1A1TA0A576 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
TCRBV9S1A1TA0A576 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TCRBV9S1A1TA0A576 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TCRBV9S1A1TA0A576 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
TCRBV9S1A1TA0A576 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
TCRBV9S1A1TA0A576 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.67■■□□□ 1.38
TCRBV9S1A1TA0A576 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TCRBV9S1A1TA0A576 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
TCRBV9S1A1TA0A576 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TCRBV9S1A1TA0A576 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TCRBV9S1A1TA0A576 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
TCRBV9S1A1TA0A576 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
TCRBV9S1A1TA0A576 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
TCRBV9S1A1TA0A576 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC23.65■■□□□ 1.38
TCRBV9S1A1TA0A576 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC23.65■■□□□ 1.38
TCRBV9S1A1TA0A576 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TCRBV9S1A1TA0A576 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC23.65■■□□□ 1.38
TCRBV9S1A1TA0A576 AC022413.1-201ENST00000624602 984 ntBASIC23.65■■□□□ 1.38
TCRBV9S1A1TA0A576 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC23.65■■□□□ 1.38
TCRBV9S1A1TA0A576 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TCRBV9S1A1TA0A576 AC133561.1-201ENST00000568600 2415 ntBASIC23.64■■□□□ 1.38
TCRBV9S1A1TA0A576 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
TCRBV9S1A1TA0A576 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
TCRBV9S1A1TA0A576 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC23.64■■□□□ 1.37
TCRBV9S1A1TA0A576 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
TCRBV9S1A1TA0A576 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC23.64■■□□□ 1.37
TCRBV9S1A1TA0A576 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TCRBV9S1A1TA0A576 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC23.63■■□□□ 1.37
TCRBV9S1A1TA0A576 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TCRBV9S1A1TA0A576 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TCRBV9S1A1TA0A576 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
TCRBV9S1A1TA0A576 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TCRBV9S1A1TA0A576 PVT1-219ENST00000523427 938 ntTSL 3 BASIC23.63■■□□□ 1.37
TCRBV9S1A1TA0A576 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC23.63■■□□□ 1.37
TCRBV9S1A1TA0A576 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
TCRBV9S1A1TA0A576 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
TCRBV9S1A1TA0A576 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
TCRBV9S1A1TA0A576 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
TCRBV9S1A1TA0A576 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
TCRBV9S1A1TA0A576 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
TCRBV9S1A1TA0A576 AC007029.1-201ENST00000604183 313 ntBASIC23.62■■□□□ 1.37
TCRBV9S1A1TA0A576 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
TCRBV9S1A1TA0A576 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
TCRBV9S1A1TA0A576 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
TCRBV9S1A1TA0A576 ABCB10P4-201ENST00000566803 2184 ntBASIC23.62■■□□□ 1.37
TCRBV9S1A1TA0A576 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC23.62■■□□□ 1.37
TCRBV9S1A1TA0A576 HLA-L-211ENST00000482052 1765 ntBASIC23.62■■□□□ 1.37
TCRBV9S1A1TA0A576 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
TCRBV9S1A1TA0A576 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC23.61■■□□□ 1.37
TCRBV9S1A1TA0A576 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC23.61■■□□□ 1.37
TCRBV9S1A1TA0A576 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
TCRBV9S1A1TA0A576 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC23.61■■□□□ 1.37
TCRBV9S1A1TA0A576 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC23.61■■□□□ 1.37
TCRBV9S1A1TA0A576 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC23.61■■□□□ 1.37
TCRBV9S1A1TA0A576 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC23.61■■□□□ 1.37
TCRBV9S1A1TA0A576 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
TCRBV9S1A1TA0A576 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TCRBV9S1A1TA0A576 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
TCRBV9S1A1TA0A576 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
TCRBV9S1A1TA0A576 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC23.6■■□□□ 1.37
TCRBV9S1A1TA0A576 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC23.6■■□□□ 1.37
TCRBV9S1A1TA0A576 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
TCRBV9S1A1TA0A576 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
TCRBV9S1A1TA0A576 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
TCRBV9S1A1TA0A576 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
TCRBV9S1A1TA0A576 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
TCRBV9S1A1TA0A576 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TCRBV9S1A1TA0A576 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
TCRBV9S1A1TA0A576 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
TCRBV9S1A1TA0A576 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
TCRBV9S1A1TA0A576 CEP120-209ENST00000515110 606 ntTSL 3 BASIC23.58■■□□□ 1.37
TCRBV9S1A1TA0A576 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC23.58■■□□□ 1.37
TCRBV9S1A1TA0A576 RAP2CP1-202ENST00000605179 643 ntBASIC23.58■■□□□ 1.37
TCRBV9S1A1TA0A576 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
TCRBV9S1A1TA0A576 SHD-204ENST00000599689 1729 ntTSL 5 BASIC23.58■■□□□ 1.37
TCRBV9S1A1TA0A576 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.58■■□□□ 1.36
TCRBV9S1A1TA0A576 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
TCRBV9S1A1TA0A576 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC23.58■■□□□ 1.36
TCRBV9S1A1TA0A576 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
TCRBV9S1A1TA0A576 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TCRBV9S1A1TA0A576 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
TCRBV9S1A1TA0A576 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
TCRBV9S1A1TA0A576 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
TCRBV9S1A1TA0A576 FOXO3B-201ENST00000395675 1928 ntBASIC23.57■■□□□ 1.36
TCRBV9S1A1TA0A576 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
TCRBV9S1A1TA0A576 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
TCRBV9S1A1TA0A576 GFER-205ENST00000569451 517 ntTSL 5 BASIC23.56■■□□□ 1.36
TCRBV9S1A1TA0A576 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TCRBV9S1A1TA0A576 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
TCRBV9S1A1TA0A576 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC23.55■■□□□ 1.36
TCRBV9S1A1TA0A576 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
TCRBV9S1A1TA0A576 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TCRBV9S1A1TA0A576 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC23.55■■□□□ 1.36
TCRBV9S1A1TA0A576 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC23.55■■□□□ 1.36
TCRBV9S1A1TA0A576 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TCRBV9S1A1TA0A576 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TCRBV9S1A1TA0A576 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC23.55■■□□□ 1.36
TCRBV9S1A1TA0A576 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC23.55■■□□□ 1.36
TCRBV9S1A1TA0A576 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms