Protein–RNA interactions for Protein: A0A0C4DH25

IGKV3D-20, Immunoglobulin kappa variable 3D-20, humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-20A0A0C4DH25 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IGKV3D-20A0A0C4DH25 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
IGKV3D-20A0A0C4DH25 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IGKV3D-20A0A0C4DH25 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC17.38■□□□□ 0.37
IGKV3D-20A0A0C4DH25 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IGKV3D-20A0A0C4DH25 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IGKV3D-20A0A0C4DH25 AC012676.1-201ENST00000574705 1949 ntBASIC17.37■□□□□ 0.37
IGKV3D-20A0A0C4DH25 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC17.37■□□□□ 0.37
IGKV3D-20A0A0C4DH25 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
IGKV3D-20A0A0C4DH25 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
IGKV3D-20A0A0C4DH25 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
IGKV3D-20A0A0C4DH25 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC17.37■□□□□ 0.37
IGKV3D-20A0A0C4DH25 AC004812.2-201ENST00000611079 2094 ntBASIC17.37■□□□□ 0.37
IGKV3D-20A0A0C4DH25 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
IGKV3D-20A0A0C4DH25 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
IGKV3D-20A0A0C4DH25 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
IGKV3D-20A0A0C4DH25 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC17.37■□□□□ 0.37
IGKV3D-20A0A0C4DH25 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
IGKV3D-20A0A0C4DH25 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
IGKV3D-20A0A0C4DH25 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
IGKV3D-20A0A0C4DH25 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
IGKV3D-20A0A0C4DH25 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC17.36■□□□□ 0.37
IGKV3D-20A0A0C4DH25 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
IGKV3D-20A0A0C4DH25 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
IGKV3D-20A0A0C4DH25 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
IGKV3D-20A0A0C4DH25 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
IGKV3D-20A0A0C4DH25 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC17.36■□□□□ 0.37
IGKV3D-20A0A0C4DH25 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC17.36■□□□□ 0.37
IGKV3D-20A0A0C4DH25 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
IGKV3D-20A0A0C4DH25 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC17.35■□□□□ 0.37
IGKV3D-20A0A0C4DH25 PFN2-211ENST00000489155 636 ntTSL 4 BASIC17.35■□□□□ 0.37
IGKV3D-20A0A0C4DH25 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
IGKV3D-20A0A0C4DH25 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC17.35■□□□□ 0.37
IGKV3D-20A0A0C4DH25 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
IGKV3D-20A0A0C4DH25 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IGKV3D-20A0A0C4DH25 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IGKV3D-20A0A0C4DH25 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
IGKV3D-20A0A0C4DH25 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC17.35■□□□□ 0.37
IGKV3D-20A0A0C4DH25 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
IGKV3D-20A0A0C4DH25 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IGKV3D-20A0A0C4DH25 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IGKV3D-20A0A0C4DH25 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
IGKV3D-20A0A0C4DH25 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
IGKV3D-20A0A0C4DH25 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
IGKV3D-20A0A0C4DH25 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
IGKV3D-20A0A0C4DH25 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
IGKV3D-20A0A0C4DH25 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
IGKV3D-20A0A0C4DH25 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
IGKV3D-20A0A0C4DH25 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC17.34■□□□□ 0.37
IGKV3D-20A0A0C4DH25 AC068473.5-201ENST00000616428 2072 ntBASIC17.34■□□□□ 0.37
IGKV3D-20A0A0C4DH25 GDI1-215ENST00000630693 786 ntTSL 4 BASIC17.34■□□□□ 0.37
IGKV3D-20A0A0C4DH25 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
IGKV3D-20A0A0C4DH25 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
IGKV3D-20A0A0C4DH25 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC17.33■□□□□ 0.37
IGKV3D-20A0A0C4DH25 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
IGKV3D-20A0A0C4DH25 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
IGKV3D-20A0A0C4DH25 LSR-205ENST00000427250 1606 ntTSL 2 BASIC17.33■□□□□ 0.37
IGKV3D-20A0A0C4DH25 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
IGKV3D-20A0A0C4DH25 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC17.33■□□□□ 0.37
IGKV3D-20A0A0C4DH25 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
IGKV3D-20A0A0C4DH25 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
IGKV3D-20A0A0C4DH25 AL157400.5-201ENST00000507624 621 ntBASIC17.33■□□□□ 0.36
IGKV3D-20A0A0C4DH25 AC025884.2-201ENST00000553429 711 ntBASIC17.33■□□□□ 0.36
IGKV3D-20A0A0C4DH25 METRNL-202ENST00000570778 967 ntTSL 5 BASIC17.33■□□□□ 0.36
IGKV3D-20A0A0C4DH25 MIR3648-2-201ENST00000581792 180 ntBASIC17.33■□□□□ 0.36
IGKV3D-20A0A0C4DH25 MIR3648-1-201ENST00000615959 180 ntBASIC17.33■□□□□ 0.36
IGKV3D-20A0A0C4DH25 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
IGKV3D-20A0A0C4DH25 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
IGKV3D-20A0A0C4DH25 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC17.33■□□□□ 0.36
IGKV3D-20A0A0C4DH25 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
IGKV3D-20A0A0C4DH25 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC17.33■□□□□ 0.36
IGKV3D-20A0A0C4DH25 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
IGKV3D-20A0A0C4DH25 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IGKV3D-20A0A0C4DH25 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IGKV3D-20A0A0C4DH25 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
IGKV3D-20A0A0C4DH25 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC17.32■□□□□ 0.36
IGKV3D-20A0A0C4DH25 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
IGKV3D-20A0A0C4DH25 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
IGKV3D-20A0A0C4DH25 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
IGKV3D-20A0A0C4DH25 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC17.32■□□□□ 0.36
IGKV3D-20A0A0C4DH25 MIR6089-201ENST00000616698 64 ntBASIC17.32■□□□□ 0.36
IGKV3D-20A0A0C4DH25 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC17.32■□□□□ 0.36
IGKV3D-20A0A0C4DH25 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC17.32■□□□□ 0.36
IGKV3D-20A0A0C4DH25 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IGKV3D-20A0A0C4DH25 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IGKV3D-20A0A0C4DH25 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
IGKV3D-20A0A0C4DH25 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IGKV3D-20A0A0C4DH25 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC17.31■□□□□ 0.36
IGKV3D-20A0A0C4DH25 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IGKV3D-20A0A0C4DH25 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
IGKV3D-20A0A0C4DH25 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
IGKV3D-20A0A0C4DH25 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
IGKV3D-20A0A0C4DH25 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
IGKV3D-20A0A0C4DH25 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
IGKV3D-20A0A0C4DH25 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
IGKV3D-20A0A0C4DH25 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC17.3■□□□□ 0.36
IGKV3D-20A0A0C4DH25 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
IGKV3D-20A0A0C4DH25 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
IGKV3D-20A0A0C4DH25 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC17.3■□□□□ 0.36
IGKV3D-20A0A0C4DH25 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms