Protein–RNA interactions for Protein: A0A0A6YYK6

TRAV16, T-cell receptor alpha variable 16 (Fragment), humanhuman

Predicted RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV16A0A0A6YYK6 DUSP8P5-201ENST00000422884 1815 ntBASIC16.23■□□□□ 0.19
TRAV16A0A0A6YYK6 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC16.23■□□□□ 0.19
TRAV16A0A0A6YYK6 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC16.23■□□□□ 0.19
TRAV16A0A0A6YYK6 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV16A0A0A6YYK6 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV16A0A0A6YYK6 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC16.22■□□□□ 0.19
TRAV16A0A0A6YYK6 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV16A0A0A6YYK6 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC16.22■□□□□ 0.19
TRAV16A0A0A6YYK6 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV16A0A0A6YYK6 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV16A0A0A6YYK6 TPT1-202ENST00000379055 948 ntTSL 2 BASIC16.22■□□□□ 0.19
TRAV16A0A0A6YYK6 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV16A0A0A6YYK6 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV16A0A0A6YYK6 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV16A0A0A6YYK6 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV16A0A0A6YYK6 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
TRAV16A0A0A6YYK6 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV16A0A0A6YYK6 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV16A0A0A6YYK6 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV16A0A0A6YYK6 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV16A0A0A6YYK6 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV16A0A0A6YYK6 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV16A0A0A6YYK6 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC16.21■□□□□ 0.19
TRAV16A0A0A6YYK6 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC16.21■□□□□ 0.19
TRAV16A0A0A6YYK6 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV16A0A0A6YYK6 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV16A0A0A6YYK6 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TRAV16A0A0A6YYK6 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV16A0A0A6YYK6 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV16A0A0A6YYK6 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV16A0A0A6YYK6 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV16A0A0A6YYK6 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
TRAV16A0A0A6YYK6 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV16A0A0A6YYK6 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV16A0A0A6YYK6 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV16A0A0A6YYK6 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV16A0A0A6YYK6 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV16A0A0A6YYK6 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC16.2■□□□□ 0.18
TRAV16A0A0A6YYK6 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV16A0A0A6YYK6 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV16A0A0A6YYK6 AC142472.1-201ENST00000612013 1741 ntBASIC16.19■□□□□ 0.18
TRAV16A0A0A6YYK6 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV16A0A0A6YYK6 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV16A0A0A6YYK6 RPS2-202ENST00000526522 924 ntTSL 2 BASIC16.19■□□□□ 0.18
TRAV16A0A0A6YYK6 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC16.19■□□□□ 0.18
TRAV16A0A0A6YYK6 MIR4449-201ENST00000578365 66 ntBASIC16.19■□□□□ 0.18
TRAV16A0A0A6YYK6 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV16A0A0A6YYK6 LINC01124-201ENST00000409786 2117 ntBASIC16.19■□□□□ 0.18
TRAV16A0A0A6YYK6 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC16.19■□□□□ 0.18
TRAV16A0A0A6YYK6 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC16.19■□□□□ 0.18
TRAV16A0A0A6YYK6 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
TRAV16A0A0A6YYK6 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV16A0A0A6YYK6 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV16A0A0A6YYK6 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV16A0A0A6YYK6 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
TRAV16A0A0A6YYK6 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV16A0A0A6YYK6 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV16A0A0A6YYK6 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
TRAV16A0A0A6YYK6 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV16A0A0A6YYK6 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV16A0A0A6YYK6 EED-207ENST00000528180 1745 ntTSL 5 BASIC16.18■□□□□ 0.18
TRAV16A0A0A6YYK6 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV16A0A0A6YYK6 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC16.17■□□□□ 0.18
TRAV16A0A0A6YYK6 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV16A0A0A6YYK6 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TRAV16A0A0A6YYK6 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV16A0A0A6YYK6 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV16A0A0A6YYK6 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV16A0A0A6YYK6 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
TRAV16A0A0A6YYK6 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
TRAV16A0A0A6YYK6 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV16A0A0A6YYK6 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV16A0A0A6YYK6 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV16A0A0A6YYK6 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV16A0A0A6YYK6 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV16A0A0A6YYK6 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV16A0A0A6YYK6 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV16A0A0A6YYK6 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV16A0A0A6YYK6 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV16A0A0A6YYK6 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV16A0A0A6YYK6 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC16.16■□□□□ 0.18
TRAV16A0A0A6YYK6 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TRAV16A0A0A6YYK6 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV16A0A0A6YYK6 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV16A0A0A6YYK6 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV16A0A0A6YYK6 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV16A0A0A6YYK6 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC16.16■□□□□ 0.18
TRAV16A0A0A6YYK6 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV16A0A0A6YYK6 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV16A0A0A6YYK6 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV16A0A0A6YYK6 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV16A0A0A6YYK6 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV16A0A0A6YYK6 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV16A0A0A6YYK6 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
TRAV16A0A0A6YYK6 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
TRAV16A0A0A6YYK6 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV16A0A0A6YYK6 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV16A0A0A6YYK6 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV16A0A0A6YYK6 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC16.14■□□□□ 0.17
TRAV16A0A0A6YYK6 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms