Protein–RNA interactions for Protein: A0A0A6YYK1

TRAV8-1, T-cell receptor alpha variable 8-1 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1A0A0A6YYK1 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
TRAV8-1A0A0A6YYK1 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC17.77■□□□□ 0.44
TRAV8-1A0A0A6YYK1 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAV8-1A0A0A6YYK1 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAV8-1A0A0A6YYK1 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TRAV8-1A0A0A6YYK1 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV8-1A0A0A6YYK1 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
TRAV8-1A0A0A6YYK1 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV8-1A0A0A6YYK1 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC17.76■□□□□ 0.43
TRAV8-1A0A0A6YYK1 DUSP8P5-201ENST00000422884 1815 ntBASIC17.76■□□□□ 0.43
TRAV8-1A0A0A6YYK1 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV8-1A0A0A6YYK1 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV8-1A0A0A6YYK1 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV8-1A0A0A6YYK1 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV8-1A0A0A6YYK1 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
TRAV8-1A0A0A6YYK1 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC17.75■□□□□ 0.43
TRAV8-1A0A0A6YYK1 ME2-208ENST00000638937 2471 ntTSL 5 BASIC17.75■□□□□ 0.43
TRAV8-1A0A0A6YYK1 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV8-1A0A0A6YYK1 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV8-1A0A0A6YYK1 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV8-1A0A0A6YYK1 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV8-1A0A0A6YYK1 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV8-1A0A0A6YYK1 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV8-1A0A0A6YYK1 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
TRAV8-1A0A0A6YYK1 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV8-1A0A0A6YYK1 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC17.74■□□□□ 0.43
TRAV8-1A0A0A6YYK1 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV8-1A0A0A6YYK1 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV8-1A0A0A6YYK1 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV8-1A0A0A6YYK1 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV8-1A0A0A6YYK1 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV8-1A0A0A6YYK1 RNF166-209ENST00000567844 633 ntTSL 5 BASIC17.74■□□□□ 0.43
TRAV8-1A0A0A6YYK1 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC17.74■□□□□ 0.43
TRAV8-1A0A0A6YYK1 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV8-1A0A0A6YYK1 C9orf163-202ENST00000624034 2573 ntBASIC17.73■□□□□ 0.43
TRAV8-1A0A0A6YYK1 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV8-1A0A0A6YYK1 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV8-1A0A0A6YYK1 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV8-1A0A0A6YYK1 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV8-1A0A0A6YYK1 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC17.72■□□□□ 0.43
TRAV8-1A0A0A6YYK1 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
TRAV8-1A0A0A6YYK1 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV8-1A0A0A6YYK1 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
TRAV8-1A0A0A6YYK1 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC17.72■□□□□ 0.43
TRAV8-1A0A0A6YYK1 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC17.72■□□□□ 0.43
TRAV8-1A0A0A6YYK1 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV8-1A0A0A6YYK1 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC17.71■□□□□ 0.43
TRAV8-1A0A0A6YYK1 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV8-1A0A0A6YYK1 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC17.71■□□□□ 0.43
TRAV8-1A0A0A6YYK1 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV8-1A0A0A6YYK1 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC17.71■□□□□ 0.43
TRAV8-1A0A0A6YYK1 ZNRF2P2-203ENST00000454624 420 ntBASIC17.71■□□□□ 0.43
TRAV8-1A0A0A6YYK1 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV8-1A0A0A6YYK1 CR559946.2-201ENST00000623684 991 ntBASIC17.71■□□□□ 0.43
TRAV8-1A0A0A6YYK1 LSR-205ENST00000427250 1606 ntTSL 2 BASIC17.71■□□□□ 0.43
TRAV8-1A0A0A6YYK1 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV8-1A0A0A6YYK1 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC17.71■□□□□ 0.43
TRAV8-1A0A0A6YYK1 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV8-1A0A0A6YYK1 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV8-1A0A0A6YYK1 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
TRAV8-1A0A0A6YYK1 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
TRAV8-1A0A0A6YYK1 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
TRAV8-1A0A0A6YYK1 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
TRAV8-1A0A0A6YYK1 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV8-1A0A0A6YYK1 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV8-1A0A0A6YYK1 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV8-1A0A0A6YYK1 AGPS-202ENST00000409888 815 ntTSL 4 BASIC17.7■□□□□ 0.42
TRAV8-1A0A0A6YYK1 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV8-1A0A0A6YYK1 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV8-1A0A0A6YYK1 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV8-1A0A0A6YYK1 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV8-1A0A0A6YYK1 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV8-1A0A0A6YYK1 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC17.69■□□□□ 0.42
TRAV8-1A0A0A6YYK1 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV8-1A0A0A6YYK1 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC17.69■□□□□ 0.42
TRAV8-1A0A0A6YYK1 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV8-1A0A0A6YYK1 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC17.69■□□□□ 0.42
TRAV8-1A0A0A6YYK1 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV8-1A0A0A6YYK1 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
TRAV8-1A0A0A6YYK1 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC17.69■□□□□ 0.42
TRAV8-1A0A0A6YYK1 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV8-1A0A0A6YYK1 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV8-1A0A0A6YYK1 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV8-1A0A0A6YYK1 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TRAV8-1A0A0A6YYK1 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV8-1A0A0A6YYK1 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV8-1A0A0A6YYK1 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV8-1A0A0A6YYK1 MIR6089-201ENST00000616698 64 ntBASIC17.68■□□□□ 0.42
TRAV8-1A0A0A6YYK1 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV8-1A0A0A6YYK1 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC17.67■□□□□ 0.42
TRAV8-1A0A0A6YYK1 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
TRAV8-1A0A0A6YYK1 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC17.67■□□□□ 0.42
TRAV8-1A0A0A6YYK1 SHD-204ENST00000599689 1729 ntTSL 5 BASIC17.67■□□□□ 0.42
TRAV8-1A0A0A6YYK1 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV8-1A0A0A6YYK1 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV8-1A0A0A6YYK1 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV8-1A0A0A6YYK1 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV8-1A0A0A6YYK1 MLEC-202ENST00000412616 841 ntTSL 3 BASIC17.67■□□□□ 0.42
TRAV8-1A0A0A6YYK1 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC17.67■□□□□ 0.42
TRAV8-1A0A0A6YYK1 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms