Protein–RNA interactions for Protein: A0A0A6YYG3

TRBV6-8, T-cell receptor beta variable 6-8 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-8A0A0A6YYG3 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV6-8A0A0A6YYG3 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC16.29■□□□□ 0.2
TRBV6-8A0A0A6YYG3 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC16.29■□□□□ 0.2
TRBV6-8A0A0A6YYG3 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC16.29■□□□□ 0.2
TRBV6-8A0A0A6YYG3 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV6-8A0A0A6YYG3 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
TRBV6-8A0A0A6YYG3 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV6-8A0A0A6YYG3 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC16.29■□□□□ 0.2
TRBV6-8A0A0A6YYG3 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV6-8A0A0A6YYG3 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC16.29■□□□□ 0.2
TRBV6-8A0A0A6YYG3 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV6-8A0A0A6YYG3 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV6-8A0A0A6YYG3 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC16.29■□□□□ 0.2
TRBV6-8A0A0A6YYG3 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV6-8A0A0A6YYG3 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV6-8A0A0A6YYG3 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV6-8A0A0A6YYG3 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV6-8A0A0A6YYG3 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV6-8A0A0A6YYG3 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV6-8A0A0A6YYG3 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV6-8A0A0A6YYG3 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
TRBV6-8A0A0A6YYG3 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV6-8A0A0A6YYG3 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV6-8A0A0A6YYG3 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
TRBV6-8A0A0A6YYG3 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
TRBV6-8A0A0A6YYG3 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRBV6-8A0A0A6YYG3 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRBV6-8A0A0A6YYG3 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
TRBV6-8A0A0A6YYG3 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRBV6-8A0A0A6YYG3 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRBV6-8A0A0A6YYG3 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC16.27■□□□□ 0.19
TRBV6-8A0A0A6YYG3 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRBV6-8A0A0A6YYG3 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC16.26■□□□□ 0.19
TRBV6-8A0A0A6YYG3 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV6-8A0A0A6YYG3 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV6-8A0A0A6YYG3 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC16.26■□□□□ 0.19
TRBV6-8A0A0A6YYG3 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV6-8A0A0A6YYG3 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV6-8A0A0A6YYG3 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC16.26■□□□□ 0.19
TRBV6-8A0A0A6YYG3 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV6-8A0A0A6YYG3 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC16.26■□□□□ 0.19
TRBV6-8A0A0A6YYG3 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV6-8A0A0A6YYG3 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV6-8A0A0A6YYG3 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV6-8A0A0A6YYG3 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV6-8A0A0A6YYG3 AC018755.3-202ENST00000596210 929 ntBASIC16.25■□□□□ 0.19
TRBV6-8A0A0A6YYG3 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
TRBV6-8A0A0A6YYG3 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC16.25■□□□□ 0.19
TRBV6-8A0A0A6YYG3 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC16.25■□□□□ 0.19
TRBV6-8A0A0A6YYG3 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV6-8A0A0A6YYG3 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV6-8A0A0A6YYG3 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV6-8A0A0A6YYG3 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
TRBV6-8A0A0A6YYG3 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV6-8A0A0A6YYG3 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV6-8A0A0A6YYG3 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV6-8A0A0A6YYG3 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV6-8A0A0A6YYG3 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV6-8A0A0A6YYG3 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV6-8A0A0A6YYG3 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
TRBV6-8A0A0A6YYG3 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV6-8A0A0A6YYG3 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
TRBV6-8A0A0A6YYG3 TMEM202-AS1-202ENST00000565181 2325 ntBASIC16.24■□□□□ 0.19
TRBV6-8A0A0A6YYG3 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV6-8A0A0A6YYG3 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV6-8A0A0A6YYG3 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV6-8A0A0A6YYG3 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV6-8A0A0A6YYG3 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC16.23■□□□□ 0.19
TRBV6-8A0A0A6YYG3 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
TRBV6-8A0A0A6YYG3 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV6-8A0A0A6YYG3 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC16.23■□□□□ 0.19
TRBV6-8A0A0A6YYG3 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV6-8A0A0A6YYG3 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV6-8A0A0A6YYG3 HYI-213ENST00000583037 1322 ntTSL 5 BASIC16.22■□□□□ 0.19
TRBV6-8A0A0A6YYG3 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC16.22■□□□□ 0.19
TRBV6-8A0A0A6YYG3 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV6-8A0A0A6YYG3 AL592293.1-201ENST00000502889 1188 ntBASIC16.22■□□□□ 0.19
TRBV6-8A0A0A6YYG3 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC16.22■□□□□ 0.19
TRBV6-8A0A0A6YYG3 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
TRBV6-8A0A0A6YYG3 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
TRBV6-8A0A0A6YYG3 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV6-8A0A0A6YYG3 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV6-8A0A0A6YYG3 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC16.22■□□□□ 0.19
TRBV6-8A0A0A6YYG3 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
TRBV6-8A0A0A6YYG3 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV6-8A0A0A6YYG3 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TRBV6-8A0A0A6YYG3 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV6-8A0A0A6YYG3 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV6-8A0A0A6YYG3 RPS2P7-201ENST00000447334 885 ntBASIC16.21■□□□□ 0.19
TRBV6-8A0A0A6YYG3 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV6-8A0A0A6YYG3 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV6-8A0A0A6YYG3 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV6-8A0A0A6YYG3 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
TRBV6-8A0A0A6YYG3 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV6-8A0A0A6YYG3 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
TRBV6-8A0A0A6YYG3 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TRBV6-8A0A0A6YYG3 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC16.21■□□□□ 0.18
TRBV6-8A0A0A6YYG3 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
TRBV6-8A0A0A6YYG3 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV6-8A0A0A6YYG3 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms