Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC28.29■■■□□ 2.12
PCDHB11Q9Y5F2 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC28.25■■■□□ 2.11
PCDHB11Q9Y5F2 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC28.25■■■□□ 2.11
PCDHB11Q9Y5F2 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
PCDHB11Q9Y5F2 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
PCDHB11Q9Y5F2 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC28.17■■■□□ 2.1
PCDHB11Q9Y5F2 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
PCDHB11Q9Y5F2 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
PCDHB11Q9Y5F2 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC28.15■■■□□ 2.1
PCDHB11Q9Y5F2 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC28.14■■■□□ 2.1
PCDHB11Q9Y5F2 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
PCDHB11Q9Y5F2 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC28.11■■■□□ 2.09
PCDHB11Q9Y5F2 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC28.1■■■□□ 2.09
PCDHB11Q9Y5F2 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC28.09■■■□□ 2.09
PCDHB11Q9Y5F2 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC28.06■■■□□ 2.08
PCDHB11Q9Y5F2 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
PCDHB11Q9Y5F2 DYNLL1-208ENST00000550178 581 ntBASIC28.03■■■□□ 2.08
PCDHB11Q9Y5F2 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC28.02■■■□□ 2.08
PCDHB11Q9Y5F2 AC145285.7-201ENST00000614819 1539 ntBASIC28■■■□□ 2.07
PCDHB11Q9Y5F2 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC27.99■■■□□ 2.07
PCDHB11Q9Y5F2 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC27.99■■■□□ 2.07
PCDHB11Q9Y5F2 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
PCDHB11Q9Y5F2 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC27.96■■■□□ 2.07
PCDHB11Q9Y5F2 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
PCDHB11Q9Y5F2 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC27.96■■■□□ 2.07
PCDHB11Q9Y5F2 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
PCDHB11Q9Y5F2 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
PCDHB11Q9Y5F2 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC27.94■■■□□ 2.06
PCDHB11Q9Y5F2 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
PCDHB11Q9Y5F2 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
PCDHB11Q9Y5F2 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
PCDHB11Q9Y5F2 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
PCDHB11Q9Y5F2 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC27.83■■■□□ 2.05
PCDHB11Q9Y5F2 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC27.81■■■□□ 2.04
PCDHB11Q9Y5F2 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
PCDHB11Q9Y5F2 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC27.8■■■□□ 2.04
PCDHB11Q9Y5F2 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
PCDHB11Q9Y5F2 AL031258.1-201ENST00000623562 325 ntBASIC27.78■■■□□ 2.04
PCDHB11Q9Y5F2 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
PCDHB11Q9Y5F2 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC27.73■■■□□ 2.03
PCDHB11Q9Y5F2 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC27.73■■■□□ 2.03
PCDHB11Q9Y5F2 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC27.71■■■□□ 2.03
PCDHB11Q9Y5F2 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
PCDHB11Q9Y5F2 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC27.7■■■□□ 2.02
PCDHB11Q9Y5F2 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC27.7■■■□□ 2.02
PCDHB11Q9Y5F2 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
PCDHB11Q9Y5F2 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC27.69■■■□□ 2.02
PCDHB11Q9Y5F2 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC27.68■■■□□ 2.02
PCDHB11Q9Y5F2 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
PCDHB11Q9Y5F2 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC27.67■■■□□ 2.02
PCDHB11Q9Y5F2 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
PCDHB11Q9Y5F2 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC27.66■■■□□ 2.02
PCDHB11Q9Y5F2 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
PCDHB11Q9Y5F2 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC27.66■■■□□ 2.02
PCDHB11Q9Y5F2 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC27.63■■■□□ 2.01
PCDHB11Q9Y5F2 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
PCDHB11Q9Y5F2 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC27.62■■■□□ 2.01
PCDHB11Q9Y5F2 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
PCDHB11Q9Y5F2 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
PCDHB11Q9Y5F2 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
PCDHB11Q9Y5F2 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC27.56■■■□□ 2
PCDHB11Q9Y5F2 RARRES2P7-201ENST00000567349 469 ntBASIC27.56■■■□□ 2
PCDHB11Q9Y5F2 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC27.56■■■□□ 2
PCDHB11Q9Y5F2 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC27.55■■■□□ 2
PCDHB11Q9Y5F2 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC27.53■■■□□ 2
PCDHB11Q9Y5F2 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
PCDHB11Q9Y5F2 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC27.52■■■□□ 2
PCDHB11Q9Y5F2 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC27.5■■□□□ 1.99
PCDHB11Q9Y5F2 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC27.5■■□□□ 1.99
PCDHB11Q9Y5F2 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC27.5■■□□□ 1.99
PCDHB11Q9Y5F2 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC27.48■■□□□ 1.99
PCDHB11Q9Y5F2 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
PCDHB11Q9Y5F2 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC27.45■■□□□ 1.98
PCDHB11Q9Y5F2 EBPL-203ENST00000378270 579 ntTSL 2 BASIC27.44■■□□□ 1.98
PCDHB11Q9Y5F2 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC27.43■■□□□ 1.98
PCDHB11Q9Y5F2 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
PCDHB11Q9Y5F2 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC27.4■■□□□ 1.98
PCDHB11Q9Y5F2 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
PCDHB11Q9Y5F2 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
PCDHB11Q9Y5F2 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC27.39■■□□□ 1.98
PCDHB11Q9Y5F2 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC27.38■■□□□ 1.97
PCDHB11Q9Y5F2 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC27.36■■□□□ 1.97
PCDHB11Q9Y5F2 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
PCDHB11Q9Y5F2 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
PCDHB11Q9Y5F2 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC27.35■■□□□ 1.97
PCDHB11Q9Y5F2 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC27.33■■□□□ 1.97
PCDHB11Q9Y5F2 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC27.33■■□□□ 1.97
PCDHB11Q9Y5F2 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
PCDHB11Q9Y5F2 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC27.32■■□□□ 1.96
PCDHB11Q9Y5F2 AC097358.2-201ENST00000607541 1159 ntBASIC27.32■■□□□ 1.96
PCDHB11Q9Y5F2 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC27.31■■□□□ 1.96
PCDHB11Q9Y5F2 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
PCDHB11Q9Y5F2 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
PCDHB11Q9Y5F2 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
PCDHB11Q9Y5F2 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC27.29■■□□□ 1.96
PCDHB11Q9Y5F2 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
PCDHB11Q9Y5F2 MVK-208ENST00000539696 608 ntTSL 5 BASIC27.28■■□□□ 1.96
PCDHB11Q9Y5F2 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.96
PCDHB11Q9Y5F2 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
PCDHB11Q9Y5F2 SETD8P1-201ENST00000623146 1180 ntBASIC27.24■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 12 ms