Protein–RNA interactions for Protein: Q9H4Q3

PRDM13, PR domain zinc finger protein 13, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM13Q9H4Q3 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
PRDM13Q9H4Q3 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC23.72■■□□□ 1.39
PRDM13Q9H4Q3 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
PRDM13Q9H4Q3 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PRDM13Q9H4Q3 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PRDM13Q9H4Q3 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC23.64■■□□□ 1.37
PRDM13Q9H4Q3 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PRDM13Q9H4Q3 DYNLL1-208ENST00000550178 581 ntBASIC23.64■■□□□ 1.37
PRDM13Q9H4Q3 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PRDM13Q9H4Q3 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PRDM13Q9H4Q3 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
PRDM13Q9H4Q3 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC23.62■■□□□ 1.37
PRDM13Q9H4Q3 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
PRDM13Q9H4Q3 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
PRDM13Q9H4Q3 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC23.59■■□□□ 1.37
PRDM13Q9H4Q3 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PRDM13Q9H4Q3 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PRDM13Q9H4Q3 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
PRDM13Q9H4Q3 ILK-212ENST00000532063 1617 ntTSL 2 BASIC23.53■■□□□ 1.36
PRDM13Q9H4Q3 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PRDM13Q9H4Q3 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
PRDM13Q9H4Q3 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PRDM13Q9H4Q3 AL031258.1-201ENST00000623562 325 ntBASIC23.51■■□□□ 1.35
PRDM13Q9H4Q3 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
PRDM13Q9H4Q3 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC23.48■■□□□ 1.35
PRDM13Q9H4Q3 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC23.47■■□□□ 1.35
PRDM13Q9H4Q3 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.35
PRDM13Q9H4Q3 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
PRDM13Q9H4Q3 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
PRDM13Q9H4Q3 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC23.43■■□□□ 1.34
PRDM13Q9H4Q3 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
PRDM13Q9H4Q3 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC23.41■■□□□ 1.34
PRDM13Q9H4Q3 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC23.4■■□□□ 1.34
PRDM13Q9H4Q3 ST7-205ENST00000393446 2114 ntTSL 5 BASIC23.34■■□□□ 1.33
PRDM13Q9H4Q3 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.32
PRDM13Q9H4Q3 ST7-202ENST00000323984 2142 ntTSL 5 BASIC23.32■■□□□ 1.32
PRDM13Q9H4Q3 ST7-207ENST00000393449 2127 ntTSL 5 BASIC23.32■■□□□ 1.32
PRDM13Q9H4Q3 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PRDM13Q9H4Q3 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PRDM13Q9H4Q3 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PRDM13Q9H4Q3 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC23.3■■□□□ 1.32
PRDM13Q9H4Q3 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
PRDM13Q9H4Q3 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC23.29■■□□□ 1.32
PRDM13Q9H4Q3 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC23.29■■□□□ 1.32
PRDM13Q9H4Q3 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC23.29■■□□□ 1.32
PRDM13Q9H4Q3 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PRDM13Q9H4Q3 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PRDM13Q9H4Q3 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC23.25■■□□□ 1.31
PRDM13Q9H4Q3 EBPL-203ENST00000378270 579 ntTSL 2 BASIC23.24■■□□□ 1.31
PRDM13Q9H4Q3 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
PRDM13Q9H4Q3 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PRDM13Q9H4Q3 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
PRDM13Q9H4Q3 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC23.22■■□□□ 1.31
PRDM13Q9H4Q3 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC23.21■■□□□ 1.31
PRDM13Q9H4Q3 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
PRDM13Q9H4Q3 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC23.21■■□□□ 1.31
PRDM13Q9H4Q3 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC23.21■■□□□ 1.31
PRDM13Q9H4Q3 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
PRDM13Q9H4Q3 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC23.2■■□□□ 1.3
PRDM13Q9H4Q3 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PRDM13Q9H4Q3 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PRDM13Q9H4Q3 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
PRDM13Q9H4Q3 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PRDM13Q9H4Q3 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PRDM13Q9H4Q3 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
PRDM13Q9H4Q3 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PRDM13Q9H4Q3 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
PRDM13Q9H4Q3 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PRDM13Q9H4Q3 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PRDM13Q9H4Q3 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
PRDM13Q9H4Q3 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC23.07■■□□□ 1.28
PRDM13Q9H4Q3 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
PRDM13Q9H4Q3 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PRDM13Q9H4Q3 RARRES2P7-201ENST00000567349 469 ntBASIC23.05■■□□□ 1.28
PRDM13Q9H4Q3 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PRDM13Q9H4Q3 AL161658.1-201ENST00000623641 1967 ntBASIC23.04■■□□□ 1.28
PRDM13Q9H4Q3 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC23.04■■□□□ 1.28
PRDM13Q9H4Q3 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC23.04■■□□□ 1.28
PRDM13Q9H4Q3 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PRDM13Q9H4Q3 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC23.02■■□□□ 1.28
PRDM13Q9H4Q3 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PRDM13Q9H4Q3 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC23.01■■□□□ 1.27
PRDM13Q9H4Q3 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PRDM13Q9H4Q3 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PRDM13Q9H4Q3 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PRDM13Q9H4Q3 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
PRDM13Q9H4Q3 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC22.97■■□□□ 1.27
PRDM13Q9H4Q3 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC22.96■■□□□ 1.27
PRDM13Q9H4Q3 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC22.96■■□□□ 1.27
PRDM13Q9H4Q3 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC22.96■■□□□ 1.27
PRDM13Q9H4Q3 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC22.95■■□□□ 1.26
PRDM13Q9H4Q3 AC145285.7-201ENST00000614819 1539 ntBASIC22.93■■□□□ 1.26
PRDM13Q9H4Q3 KLF16-203ENST00000592313 508 ntTSL 3 BASIC22.93■■□□□ 1.26
PRDM13Q9H4Q3 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC22.92■■□□□ 1.26
PRDM13Q9H4Q3 MVK-208ENST00000539696 608 ntTSL 5 BASIC22.91■■□□□ 1.26
PRDM13Q9H4Q3 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.25
PRDM13Q9H4Q3 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC22.88■■□□□ 1.25
PRDM13Q9H4Q3 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC22.87■■□□□ 1.25
PRDM13Q9H4Q3 AC097358.2-201ENST00000607541 1159 ntBASIC22.86■■□□□ 1.25
PRDM13Q9H4Q3 SETD8P1-201ENST00000623146 1180 ntBASIC22.86■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms