Protein–RNA interactions for Protein: Q8TF05

PPP4R1, Serine/threonine-protein phosphatase 4 regulatory subunit 1, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1Q8TF05 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
PPP4R1Q8TF05 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC28.54■■■□□ 2.16
PPP4R1Q8TF05 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC28.52■■■□□ 2.16
PPP4R1Q8TF05 AC145285.7-201ENST00000614819 1539 ntBASIC28.52■■■□□ 2.16
PPP4R1Q8TF05 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
PPP4R1Q8TF05 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC28.48■■■□□ 2.15
PPP4R1Q8TF05 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC28.45■■■□□ 2.14
PPP4R1Q8TF05 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
PPP4R1Q8TF05 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
PPP4R1Q8TF05 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC28.43■■■□□ 2.14
PPP4R1Q8TF05 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
PPP4R1Q8TF05 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC28.41■■■□□ 2.14
PPP4R1Q8TF05 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC28.41■■■□□ 2.14
PPP4R1Q8TF05 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC28.41■■■□□ 2.14
PPP4R1Q8TF05 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC28.41■■■□□ 2.14
PPP4R1Q8TF05 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
PPP4R1Q8TF05 AC006077.2-201ENST00000623591 457 ntBASIC28.38■■■□□ 2.13
PPP4R1Q8TF05 ST7-205ENST00000393446 2114 ntTSL 5 BASIC28.37■■■□□ 2.13
PPP4R1Q8TF05 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
PPP4R1Q8TF05 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
PPP4R1Q8TF05 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC28.36■■■□□ 2.13
PPP4R1Q8TF05 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
PPP4R1Q8TF05 ZNRF2P1-201ENST00000441407 443 ntBASIC28.34■■■□□ 2.13
PPP4R1Q8TF05 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
PPP4R1Q8TF05 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC28.32■■■□□ 2.12
PPP4R1Q8TF05 ST7-202ENST00000323984 2142 ntTSL 5 BASIC28.32■■■□□ 2.12
PPP4R1Q8TF05 ST7-207ENST00000393449 2127 ntTSL 5 BASIC28.32■■■□□ 2.12
PPP4R1Q8TF05 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC28.32■■■□□ 2.12
PPP4R1Q8TF05 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC28.31■■■□□ 2.12
PPP4R1Q8TF05 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC28.29■■■□□ 2.12
PPP4R1Q8TF05 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC28.29■■■□□ 2.12
PPP4R1Q8TF05 AC015813.7-201ENST00000623294 581 ntBASIC28.29■■■□□ 2.12
PPP4R1Q8TF05 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
PPP4R1Q8TF05 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC28.24■■■□□ 2.11
PPP4R1Q8TF05 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
PPP4R1Q8TF05 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
PPP4R1Q8TF05 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
PPP4R1Q8TF05 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
PPP4R1Q8TF05 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
PPP4R1Q8TF05 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC28.16■■■□□ 2.1
PPP4R1Q8TF05 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
PPP4R1Q8TF05 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
PPP4R1Q8TF05 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC28.12■■■□□ 2.09
PPP4R1Q8TF05 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC28.11■■■□□ 2.09
PPP4R1Q8TF05 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
PPP4R1Q8TF05 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
PPP4R1Q8TF05 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC28.09■■■□□ 2.09
PPP4R1Q8TF05 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
PPP4R1Q8TF05 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC28.08■■■□□ 2.09
PPP4R1Q8TF05 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC28.07■■■□□ 2.08
PPP4R1Q8TF05 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC28.07■■■□□ 2.08
PPP4R1Q8TF05 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
PPP4R1Q8TF05 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
PPP4R1Q8TF05 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
PPP4R1Q8TF05 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
PPP4R1Q8TF05 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC28.02■■■□□ 2.08
PPP4R1Q8TF05 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
PPP4R1Q8TF05 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC28■■■□□ 2.07
PPP4R1Q8TF05 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
PPP4R1Q8TF05 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
PPP4R1Q8TF05 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC27.97■■■□□ 2.07
PPP4R1Q8TF05 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC27.96■■■□□ 2.07
PPP4R1Q8TF05 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
PPP4R1Q8TF05 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
PPP4R1Q8TF05 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC27.91■■■□□ 2.06
PPP4R1Q8TF05 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
PPP4R1Q8TF05 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
PPP4R1Q8TF05 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
PPP4R1Q8TF05 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC27.88■■■□□ 2.05
PPP4R1Q8TF05 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC27.88■■■□□ 2.05
PPP4R1Q8TF05 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
PPP4R1Q8TF05 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC27.86■■■□□ 2.05
PPP4R1Q8TF05 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC27.84■■■□□ 2.05
PPP4R1Q8TF05 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC27.83■■■□□ 2.05
PPP4R1Q8TF05 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
PPP4R1Q8TF05 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
PPP4R1Q8TF05 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
PPP4R1Q8TF05 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
PPP4R1Q8TF05 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC27.81■■■□□ 2.04
PPP4R1Q8TF05 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
PPP4R1Q8TF05 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
PPP4R1Q8TF05 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
PPP4R1Q8TF05 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC27.79■■■□□ 2.04
PPP4R1Q8TF05 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
PPP4R1Q8TF05 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
PPP4R1Q8TF05 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC27.75■■■□□ 2.03
PPP4R1Q8TF05 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
PPP4R1Q8TF05 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
PPP4R1Q8TF05 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
PPP4R1Q8TF05 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
PPP4R1Q8TF05 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC27.72■■■□□ 2.03
PPP4R1Q8TF05 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
PPP4R1Q8TF05 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC27.71■■■□□ 2.03
PPP4R1Q8TF05 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC27.69■■■□□ 2.02
PPP4R1Q8TF05 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC27.68■■■□□ 2.02
PPP4R1Q8TF05 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC27.65■■■□□ 2.02
PPP4R1Q8TF05 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
PPP4R1Q8TF05 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
PPP4R1Q8TF05 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
PPP4R1Q8TF05 AP002365.1-201ENST00000603448 772 ntBASIC27.63■■■□□ 2.01
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms