Protein–RNA interactions for Protein: Q08954

YPL199C, Smr domain-containing protein YPL199C, yeastyeast

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YPL199CQ08954 LSM3YLR438C-A 270 nt11.08□□□□□ -0.64
YPL199CQ08954 YSC84YHR016C 1407 nt11.04□□□□□ -0.64
YPL199CQ08954 PIB2YGL023C 1908 nt11.03□□□□□ -0.64
YPL199CQ08954 GFD2YCL036W 1701 nt11.01□□□□□ -0.65
YPL199CQ08954 ART5YGR068C 1761 nt10.99□□□□□ -0.65
YPL199CQ08954 WWM1YFL010C 636 nt10.97□□□□□ -0.65
YPL199CQ08954 YHL050CYHL050C 2094 nt10.96□□□□□ -0.65
YPL199CQ08954 RTF1YGL244W 1677 nt10.96□□□□□ -0.65
YPL199CQ08954 PET9YBL030C 957 nt10.93□□□□□ -0.66
YPL199CQ08954 RTS2YOR077W 699 nt10.92□□□□□ -0.66
YPL199CQ08954 BOP3YNL042W 1191 nt10.88□□□□□ -0.67
YPL199CQ08954 CUE1YMR264W 612 nt10.87□□□□□ -0.67
YPL199CQ08954 RRT12YCR045C 1476 nt10.87□□□□□ -0.67
YPL199CQ08954 YCH1YGR203W 447 nt10.86□□□□□ -0.67
YPL199CQ08954 YFL021C-AYFL021C-A 855 nt10.85□□□□□ -0.67
YPL199CQ08954 YNL195CYNL195C 786 nt10.85□□□□□ -0.67
YPL199CQ08954 PST2YDR032C 597 nt10.81□□□□□ -0.68
YPL199CQ08954 PTK1YKL198C 1989 nt10.79□□□□□ -0.68
YPL199CQ08954 YGR021WYGR021W 873 nt10.78□□□□□ -0.68
YPL199CQ08954 RDN37-1RDN37-1 5354 nt10.78□□□□□ -0.68
YPL199CQ08954 RDN37-2RDN37-2 5354 nt10.78□□□□□ -0.68
YPL199CQ08954 YIL100WYIL100W 354 nt10.77□□□□□ -0.69
YPL199CQ08954 TIR4YOR009W 1464 nt10.72□□□□□ -0.69
YPL199CQ08954 YMR057CYMR057C 372 nt10.69□□□□□ -0.7
YPL199CQ08954 HOM6YJR139C 1080 nt10.67□□□□□ -0.7
YPL199CQ08954 YLR236CYLR236C 324 nt10.65□□□□□ -0.7
YPL199CQ08954 NCP1YHR042W 2076 nt10.65□□□□□ -0.7
YPL199CQ08954 FPS1YLL043W 2010 nt10.65□□□□□ -0.71
YPL199CQ08954 YFL054CYFL054C 1941 nt10.56□□□□□ -0.72
YPL199CQ08954 BOR1YNL275W 1731 nt10.54□□□□□ -0.72
YPL199CQ08954 RKM5YLR137W 1104 nt10.52□□□□□ -0.73
YPL199CQ08954 SPT8YLR055C 1809 nt10.51□□□□□ -0.73
YPL199CQ08954 MNP1YGL068W 585 nt10.49□□□□□ -0.73
YPL199CQ08954 SHU1YHL006C 453 nt10.49□□□□□ -0.73
YPL199CQ08954 YAL037C-BYAL037C-B 975 nt10.49□□□□□ -0.73
YPL199CQ08954 Q0182Q0182 405 nt10.48□□□□□ -0.73
YPL199CQ08954 NPL3YDR432W 1245 nt10.45□□□□□ -0.74
YPL199CQ08954 YCL048W-AYCL048W-A 240 nt10.45□□□□□ -0.74
YPL199CQ08954 LCB1YMR296C 1677 nt10.41□□□□□ -0.74
YPL199CQ08954 YJL152WYJL152W 360 nt10.41□□□□□ -0.74
YPL199CQ08954 YLR154C-GYLR154C-G 150 nt10.37□□□□□ -0.75
YPL199CQ08954 UME6YDR207C 2511 nt10.31□□□□□ -0.76
YPL199CQ08954 SWE1YJL187C 2460 nt10.29□□□□□ -0.76
YPL199CQ08954 HSP60YLR259C 1719 nt10.25□□□□□ -0.77
YPL199CQ08954 YKL097CYKL097C 411 nt10.25□□□□□ -0.77
YPL199CQ08954 LYS4YDR234W 2082 nt10.22□□□□□ -0.77
YPL199CQ08954 SIM1YIL123W 1431 nt10.22□□□□□ -0.77
YPL199CQ08954 FMP52YER004W 696 nt10.2□□□□□ -0.78
YPL199CQ08954 RRD1YIL153W 1182 nt10.17□□□□□ -0.78
YPL199CQ08954 PCM1YEL058W 1674 nt10.16□□□□□ -0.78
YPL199CQ08954 ALG12YNR030W 1656 nt10.15□□□□□ -0.78
YPL199CQ08954 GLK1YCL040W 1503 nt10.14□□□□□ -0.79
YPL199CQ08954 YOL037CYOL037C 354 nt10.14□□□□□ -0.79
YPL199CQ08954 BIO4YNR057C 714 nt10.07□□□□□ -0.8
YPL199CQ08954 MCH5YOR306C 1566 nt10.06□□□□□ -0.8
YPL199CQ08954 IDH1YNL037C 1083 nt10.06□□□□□ -0.8
YPL199CQ08954 DED1YOR204W 1815 nt10.05□□□□□ -0.8
YPL199CQ08954 TCD2YKL027W 1344 nt10.05□□□□□ -0.8
YPL199CQ08954 GBP2YCL011C 1284 nt10.04□□□□□ -0.8
YPL199CQ08954 SNF6YHL025W 999 nt10.03□□□□□ -0.8
YPL199CQ08954 FUR4YBR021W 1902 nt10.02□□□□□ -0.81
YPL199CQ08954 ERF2YLR246W 1080 nt10.01□□□□□ -0.81
YPL199CQ08954 FMT1YBL013W 1206 nt9.99□□□□□ -0.81
YPL199CQ08954 WHI5YOR083W 888 nt9.99□□□□□ -0.81
YPL199CQ08954 YHR056W-AYHR056W-A 435 nt9.98□□□□□ -0.81
YPL199CQ08954 ADH2YMR303C 1047 nt9.98□□□□□ -0.81
YPL199CQ08954 MOT3YMR070W 1473 nt9.98□□□□□ -0.81
YPL199CQ08954 CWP1YKL096W 720 nt9.97□□□□□ -0.81
YPL199CQ08954 CRR1YLR213C 1269 nt9.97□□□□□ -0.81
YPL199CQ08954 DSK2YMR276W 1122 nt9.97□□□□□ -0.81
YPL199CQ08954 PRP4YPR178W 1398 nt9.93□□□□□ -0.82
YPL199CQ08954 YLR281CYLR281C 468 nt9.93□□□□□ -0.82
YPL199CQ08954 AAC1YMR056C 930 nt9.92□□□□□ -0.82
YPL199CQ08954 RAX1YOR301W 1308 nt9.91□□□□□ -0.82
YPL199CQ08954 YEL076C-AYEL076C-A 651 nt9.91□□□□□ -0.82
YPL199CQ08954 YEL076CYEL076C 651 nt9.91□□□□□ -0.82
YPL199CQ08954 YLR464WYLR464W 651 nt9.91□□□□□ -0.82
YPL199CQ08954 HEM12YDR047W 1089 nt9.89□□□□□ -0.83
YPL199CQ08954 YOR139CYOR139C 393 nt9.89□□□□□ -0.83
YPL199CQ08954 CCA1YER168C 1641 nt9.89□□□□□ -0.83
YPL199CQ08954 DPS1YLL018C 1674 nt9.88□□□□□ -0.83
YPL199CQ08954 YIH1YCR059C 777 nt9.87□□□□□ -0.83
YPL199CQ08954 SOR2YDL246C 1074 nt9.85□□□□□ -0.83
YPL199CQ08954 SOR1YJR159W 1074 nt9.85□□□□□ -0.83
YPL199CQ08954 IMP2'YIL154C 1041 nt9.84□□□□□ -0.83
YPL199CQ08954 YLL053CYLL053C 459 nt9.84□□□□□ -0.83
YPL199CQ08954 NAR1YNL240C 1476 nt9.84□□□□□ -0.83
YPL199CQ08954 BMT6YLR063W 1098 nt9.83□□□□□ -0.84
YPL199CQ08954 MIC10YCL057C-A 294 nt9.83□□□□□ -0.84
YPL199CQ08954 RNQ1YCL028W 1218 nt9.82□□□□□ -0.84
YPL199CQ08954 YCL042WYCL042W 360 nt9.82□□□□□ -0.84
YPL199CQ08954 YFL067WYFL067W 528 nt9.81□□□□□ -0.84
YPL199CQ08954 ATF2YGR177C 1608 nt9.81□□□□□ -0.84
YPL199CQ08954 SNG1YGR197C 1644 nt9.8□□□□□ -0.84
YPL199CQ08954 YDR433WYDR433W 441 nt9.77□□□□□ -0.85
YPL199CQ08954 YKR005CYKR005C 1578 nt9.76□□□□□ -0.85
YPL199CQ08954 FTR1YER145C 1215 nt9.74□□□□□ -0.85
YPL199CQ08954 WSC2YNL283C 1512 nt9.73□□□□□ -0.85
YPL199CQ08954 MXR2YCL033C 507 nt9.73□□□□□ -0.85
YPL199CQ08954 BIO5YNR056C 1686 nt9.72□□□□□ -0.85
Retrieved 100 of 7,029 protein–RNA pairs in 7.2 ms