Protein–RNA interactions for Protein: Q07807

PUF3, mRNA-binding protein PUF3, yeastyeast

Known RBP RIP-Chip data

Length 879 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUF3Q07807 YDL221WYDL221W 552 nt12.94□□□□□ -0.34
PUF3Q07807 ART5YGR068C 1761 nt12.9□□□□□ -0.34
PUF3Q07807 GFD2YCL036W 1701 nt12.85□□□□□ -0.35 RIP-Chip
PUF3Q07807 YBR220CYBR220C 1683 nt12.83□□□□□ -0.35
PUF3Q07807 PET9YBL030C 957 nt12.83□□□□□ -0.36
PUF3Q07807 YCH1YGR203W 447 nt12.81□□□□□ -0.36
PUF3Q07807 SDH1YKL148C 1923 nt12.8□□□□□ -0.36
PUF3Q07807 TIR4YOR009W 1464 nt12.8□□□□□ -0.36
PUF3Q07807 IRC15YPL017C 1500 nt12.79□□□□□ -0.36
PUF3Q07807 YLR154C-GYLR154C-G 150 nt12.79□□□□□ -0.36
PUF3Q07807 YJL152WYJL152W 360 nt12.78□□□□□ -0.36
PUF3Q07807 BDF1YLR399C 2061 nt12.75□□□□□ -0.37
PUF3Q07807 RTS2YOR077W 699 nt12.74□□□□□ -0.37
PUF3Q07807 GIS3YLR094C 1509 nt12.72□□□□□ -0.37
PUF3Q07807 SCC4YER147C 1875 nt12.72□□□□□ -0.37
PUF3Q07807 YMR057CYMR057C 372 nt12.72□□□□□ -0.37
PUF3Q07807 Q0182Q0182 405 nt12.7□□□□□ -0.38
PUF3Q07807 WHI5YOR083W 888 nt12.7□□□□□ -0.38
PUF3Q07807 YLR281CYLR281C 468 nt12.68□□□□□ -0.38
PUF3Q07807 CUE1YMR264W 612 nt12.61□□□□□ -0.39
PUF3Q07807 TAT1YBR069C 1860 nt12.59□□□□□ -0.39
PUF3Q07807 YCL048W-AYCL048W-A 240 nt12.58□□□□□ -0.4
PUF3Q07807 PUS2YGL063W 1113 nt12.53□□□□□ -0.4 RIP-Chip
PUF3Q07807 FPS1YLL043W 2010 nt12.53□□□□□ -0.4
PUF3Q07807 YIL100WYIL100W 354 nt12.52□□□□□ -0.41
PUF3Q07807 YLR236CYLR236C 324 nt12.5□□□□□ -0.41
PUF3Q07807 tM(CAU)CtM(CAU)C 72 nt12.49□□□□□ -0.41
PUF3Q07807 IMT4tM(CAU)E 72 nt12.49□□□□□ -0.41
PUF3Q07807 IMT3tM(CAU)J3 72 nt12.49□□□□□ -0.41
PUF3Q07807 IMT1tM(CAU)O1 72 nt12.49□□□□□ -0.41
PUF3Q07807 IMT2tM(CAU)P 72 nt12.49□□□□□ -0.41
PUF3Q07807 IDH1YNL037C 1083 nt12.47□□□□□ -0.41
PUF3Q07807 IMP2'YIL154C 1041 nt12.44□□□□□ -0.42
PUF3Q07807 SEC11YIR022W 504 nt12.44□□□□□ -0.42
PUF3Q07807 YNL195CYNL195C 786 nt12.43□□□□□ -0.42 RIP-Chip
PUF3Q07807 YSC84YHR016C 1407 nt12.42□□□□□ -0.42
PUF3Q07807 DSK2YMR276W 1122 nt12.41□□□□□ -0.42
PUF3Q07807 GBP2YCL011C 1284 nt12.39□□□□□ -0.43
PUF3Q07807 RRT12YCR045C 1476 nt12.36□□□□□ -0.43
PUF3Q07807 PCH2YBR186W 1695 nt12.35□□□□□ -0.43
PUF3Q07807 YHL050CYHL050C 2094 nt12.33□□□□□ -0.44
PUF3Q07807 YPR011CYPR011C 981 nt12.29□□□□□ -0.44 RIP-Chip
PUF3Q07807 TCD2YKL027W 1344 nt12.28□□□□□ -0.44
PUF3Q07807 GUT2YIL155C 1950 nt12.27□□□□□ -0.44
PUF3Q07807 YDR433WYDR433W 441 nt12.27□□□□□ -0.45
PUF3Q07807 RRD1YIL153W 1182 nt12.24□□□□□ -0.45
PUF3Q07807 FMP45YDL222C 930 nt12.21□□□□□ -0.45
PUF3Q07807 DED1YOR204W 1815 nt12.18□□□□□ -0.46
PUF3Q07807 MXR2YCL033C 507 nt12.16□□□□□ -0.46
PUF3Q07807 FMP52YER004W 696 nt12.15□□□□□ -0.46
PUF3Q07807 LPX1YOR084W 1164 nt12.15□□□□□ -0.46
PUF3Q07807 ERV46YAL042W 1248 nt12.14□□□□□ -0.47
PUF3Q07807 MOT3YMR070W 1473 nt12.11□□□□□ -0.47
PUF3Q07807 YKR040CYKR040C 504 nt12.11□□□□□ -0.47
PUF3Q07807 FMT1YBL013W 1206 nt12.09□□□□□ -0.47
PUF3Q07807 RTF1YGL244W 1677 nt12.09□□□□□ -0.47
PUF3Q07807 BOP3YNL042W 1191 nt12.07□□□□□ -0.48
PUF3Q07807 CWP1YKL096W 720 nt12.05□□□□□ -0.48
PUF3Q07807 YCL042WYCL042W 360 nt12.05□□□□□ -0.48
PUF3Q07807 PCM1YEL058W 1674 nt12.04□□□□□ -0.48
PUF3Q07807 PIB2YGL023C 1908 nt12.03□□□□□ -0.48
PUF3Q07807 ADH2YMR303C 1047 nt12.01□□□□□ -0.49
PUF3Q07807 SNF6YHL025W 999 nt11.99□□□□□ -0.49
PUF3Q07807 SOR2YDL246C 1074 nt11.98□□□□□ -0.49
PUF3Q07807 SOR1YJR159W 1074 nt11.98□□□□□ -0.49
PUF3Q07807 SIM1YIL123W 1431 nt11.95□□□□□ -0.5
PUF3Q07807 LCB1YMR296C 1677 nt11.95□□□□□ -0.5
PUF3Q07807 FRD1YEL047C 1413 nt11.94□□□□□ -0.5
PUF3Q07807 NCP1YHR042W 2076 nt11.93□□□□□ -0.5
PUF3Q07807 PTK1YKL198C 1989 nt11.87□□□□□ -0.51
PUF3Q07807 PAC11YDR488C 1602 nt11.85□□□□□ -0.51 RIP-Chip
PUF3Q07807 BIO4YNR057C 714 nt11.84□□□□□ -0.51
PUF3Q07807 SPP1YPL138C 1062 nt11.83□□□□□ -0.52
PUF3Q07807 YIH1YCR059C 777 nt11.8□□□□□ -0.52
PUF3Q07807 RNQ1YCL028W 1218 nt11.79□□□□□ -0.52
PUF3Q07807 PTH1YHR189W 573 nt11.74□□□□□ -0.53
PUF3Q07807 YLL053CYLL053C 459 nt11.74□□□□□ -0.53
PUF3Q07807 DIC1YLR348C 897 nt11.73□□□□□ -0.53
PUF3Q07807 YFL054CYFL054C 1941 nt11.72□□□□□ -0.53
PUF3Q07807 ERF2YLR246W 1080 nt11.71□□□□□ -0.53 RIP-Chip
PUF3Q07807 YLR235CYLR235C 399 nt11.7□□□□□ -0.54
PUF3Q07807 LYS4YDR234W 2082 nt11.68□□□□□ -0.54
PUF3Q07807 NVJ2YPR091C 2313 nt11.65□□□□□ -0.54
PUF3Q07807 FTR1YER145C 1215 nt11.64□□□□□ -0.55
PUF3Q07807 CRR1YLR213C 1269 nt11.63□□□□□ -0.55
PUF3Q07807 TIM23YNR017W 669 nt11.61□□□□□ -0.55 RIP-Chip
PUF3Q07807 GAL1YBR020W 1587 nt11.6□□□□□ -0.55
PUF3Q07807 YFL067WYFL067W 528 nt11.6□□□□□ -0.55
PUF3Q07807 ATF2YGR177C 1608 nt11.6□□□□□ -0.55
PUF3Q07807 TRM5YHR070W 1500 nt11.59□□□□□ -0.55
PUF3Q07807 YKL030WYKL030W 606 nt11.58□□□□□ -0.56
PUF3Q07807 DDR2YOL052C-A 186 nt11.58□□□□□ -0.56
PUF3Q07807 YLR179CYLR179C 606 nt11.57□□□□□ -0.56
PUF3Q07807 SPT8YLR055C 1809 nt11.57□□□□□ -0.56
PUF3Q07807 HEM12YDR047W 1089 nt11.56□□□□□ -0.56
PUF3Q07807 AQY1YPR192W 918 nt11.55□□□□□ -0.56
PUF3Q07807 YGR139WYGR139W 339 nt11.51□□□□□ -0.57
PUF3Q07807 MIC10YCL057C-A 294 nt11.51□□□□□ -0.57
PUF3Q07807 SNG1YGR197C 1644 nt11.5□□□□□ -0.57
PUF3Q07807 YDL086C-AYDL086C-A 435 nt11.49□□□□□ -0.57
Retrieved 100 of 7,029 protein–RNA pairs in 212.8 ms