Protein–RNA interactions for Protein: Q06696

VPS36, Vacuolar protein-sorting-associated protein 36, yeastyeast

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS36Q06696 SIS1YNL007C 1059 nt11.55□□□□□ -0.56
VPS36Q06696 RKM5YLR137W 1104 nt11.53□□□□□ -0.56
VPS36Q06696 CAC2YML102W 1407 nt11.52□□□□□ -0.56
VPS36Q06696 YDL221WYDL221W 552 nt11.48□□□□□ -0.57
VPS36Q06696 YMR090WYMR090W 684 nt11.48□□□□□ -0.57
VPS36Q06696 YBR220CYBR220C 1683 nt11.43□□□□□ -0.58
VPS36Q06696 SDH1YKL148C 1923 nt11.37□□□□□ -0.59
VPS36Q06696 ART5YGR068C 1761 nt11.37□□□□□ -0.59
VPS36Q06696 IRC15YPL017C 1500 nt11.36□□□□□ -0.59
VPS36Q06696 GFD2YCL036W 1701 nt11.36□□□□□ -0.59
VPS36Q06696 YOL037CYOL037C 354 nt11.33□□□□□ -0.6
VPS36Q06696 UME6YDR207C 2511 nt11.31□□□□□ -0.6
VPS36Q06696 PET9YBL030C 957 nt11.31□□□□□ -0.6
VPS36Q06696 YOR139CYOR139C 393 nt11.3□□□□□ -0.6
VPS36Q06696 TIR4YOR009W 1464 nt11.28□□□□□ -0.6
VPS36Q06696 GIS3YLR094C 1509 nt11.28□□□□□ -0.6
VPS36Q06696 SCC4YER147C 1875 nt11.27□□□□□ -0.6
VPS36Q06696 NPL3YDR432W 1245 nt11.26□□□□□ -0.61
VPS36Q06696 YCH1YGR203W 447 nt11.26□□□□□ -0.61
VPS36Q06696 PCH2YBR186W 1695 nt11.25□□□□□ -0.61
VPS36Q06696 RTS2YOR077W 699 nt11.23□□□□□ -0.61
VPS36Q06696 GUT2YIL155C 1950 nt11.23□□□□□ -0.61
VPS36Q06696 YLR154C-GYLR154C-G 150 nt11.19□□□□□ -0.62
VPS36Q06696 YMR057CYMR057C 372 nt11.17□□□□□ -0.62
VPS36Q06696 CUE1YMR264W 612 nt11.15□□□□□ -0.62
VPS36Q06696 SEC11YIR022W 504 nt11.13□□□□□ -0.63
VPS36Q06696 YJL152WYJL152W 360 nt11.11□□□□□ -0.63
VPS36Q06696 YLR281CYLR281C 468 nt11.08□□□□□ -0.64
VPS36Q06696 WHI5YOR083W 888 nt11.08□□□□□ -0.64
VPS36Q06696 YSC84YHR016C 1407 nt11.01□□□□□ -0.65
VPS36Q06696 YIL100WYIL100W 354 nt10.99□□□□□ -0.65
VPS36Q06696 PIB2YGL023C 1908 nt10.99□□□□□ -0.65
VPS36Q06696 YCL048W-AYCL048W-A 240 nt10.98□□□□□ -0.65
VPS36Q06696 YHL050CYHL050C 2094 nt10.97□□□□□ -0.65
VPS36Q06696 YLR236CYLR236C 324 nt10.97□□□□□ -0.65
VPS36Q06696 RRT12YCR045C 1476 nt10.94□□□□□ -0.66
VPS36Q06696 BOR1YNL275W 1731 nt10.92□□□□□ -0.66
VPS36Q06696 YJL225CYJL225C 5277 nt10.9□□□□□ -0.66
VPS36Q06696 YNL195CYNL195C 786 nt10.9□□□□□ -0.66
VPS36Q06696 PUS2YGL063W 1113 nt10.88□□□□□ -0.67
VPS36Q06696 tM(CAU)CtM(CAU)C 72 nt10.88□□□□□ -0.67
VPS36Q06696 IMT4tM(CAU)E 72 nt10.88□□□□□ -0.67
VPS36Q06696 IMT3tM(CAU)J3 72 nt10.88□□□□□ -0.67
VPS36Q06696 IMT1tM(CAU)O1 72 nt10.88□□□□□ -0.67
VPS36Q06696 IMT2tM(CAU)P 72 nt10.88□□□□□ -0.67
VPS36Q06696 IDH1YNL037C 1083 nt10.87□□□□□ -0.67
VPS36Q06696 RTF1YGL244W 1677 nt10.86□□□□□ -0.67
VPS36Q06696 IMP2'YIL154C 1041 nt10.84□□□□□ -0.67
VPS36Q06696 DSK2YMR276W 1122 nt10.82□□□□□ -0.68
VPS36Q06696 GBP2YCL011C 1284 nt10.82□□□□□ -0.68
VPS36Q06696 RRD1YIL153W 1182 nt10.81□□□□□ -0.68
VPS36Q06696 YPR011CYPR011C 981 nt10.78□□□□□ -0.68
VPS36Q06696 DED1YOR204W 1815 nt10.74□□□□□ -0.69
VPS36Q06696 TCD2YKL027W 1344 nt10.73□□□□□ -0.69
VPS36Q06696 BOP3YNL042W 1191 nt10.71□□□□□ -0.69
VPS36Q06696 FMP52YER004W 696 nt10.7□□□□□ -0.7
VPS36Q06696 PTK1YKL198C 1989 nt10.7□□□□□ -0.7
VPS36Q06696 MCH5YOR306C 1566 nt10.69□□□□□ -0.7
VPS36Q06696 FMP45YDL222C 930 nt10.68□□□□□ -0.7
VPS36Q06696 YDR433WYDR433W 441 nt10.68□□□□□ -0.7
VPS36Q06696 NCP1YHR042W 2076 nt10.67□□□□□ -0.7
VPS36Q06696 FMT1YBL013W 1206 nt10.67□□□□□ -0.7
VPS36Q06696 ERV46YAL042W 1248 nt10.64□□□□□ -0.71
VPS36Q06696 MXR2YCL033C 507 nt10.64□□□□□ -0.71
VPS36Q06696 LPX1YOR084W 1164 nt10.62□□□□□ -0.71
VPS36Q06696 PCM1YEL058W 1674 nt10.61□□□□□ -0.71
VPS36Q06696 LCB1YMR296C 1677 nt10.61□□□□□ -0.71
VPS36Q06696 YKR040CYKR040C 504 nt10.58□□□□□ -0.72
VPS36Q06696 RDN37-1RDN37-1 5354 nt10.57□□□□□ -0.72
VPS36Q06696 RDN37-2RDN37-2 5354 nt10.57□□□□□ -0.72
VPS36Q06696 SOR2YDL246C 1074 nt10.56□□□□□ -0.72
VPS36Q06696 SOR1YJR159W 1074 nt10.56□□□□□ -0.72
VPS36Q06696 CWP1YKL096W 720 nt10.56□□□□□ -0.72
VPS36Q06696 ADH2YMR303C 1047 nt10.56□□□□□ -0.72
VPS36Q06696 FRD1YEL047C 1413 nt10.5□□□□□ -0.73
VPS36Q06696 SIM1YIL123W 1431 nt10.5□□□□□ -0.73
VPS36Q06696 SNF6YHL025W 999 nt10.5□□□□□ -0.73
VPS36Q06696 YCL042WYCL042W 360 nt10.5□□□□□ -0.73
VPS36Q06696 ALG12YNR030W 1656 nt10.48□□□□□ -0.73
VPS36Q06696 YFL054CYFL054C 1941 nt10.46□□□□□ -0.73
VPS36Q06696 BIO4YNR057C 714 nt10.46□□□□□ -0.73
VPS36Q06696 SPT8YLR055C 1809 nt10.42□□□□□ -0.74
VPS36Q06696 YIH1YCR059C 777 nt10.41□□□□□ -0.74
VPS36Q06696 HSP60YLR259C 1719 nt10.41□□□□□ -0.74
VPS36Q06696 LYS4YDR234W 2082 nt10.4□□□□□ -0.75
VPS36Q06696 RNQ1YCL028W 1218 nt10.37□□□□□ -0.75
VPS36Q06696 YLL053CYLL053C 459 nt10.33□□□□□ -0.76
VPS36Q06696 SPP1YPL138C 1062 nt10.33□□□□□ -0.76
VPS36Q06696 ERF2YLR246W 1080 nt10.32□□□□□ -0.76
VPS36Q06696 CRR1YLR213C 1269 nt10.3□□□□□ -0.76
VPS36Q06696 DIC1YLR348C 897 nt10.29□□□□□ -0.76
VPS36Q06696 FTR1YER145C 1215 nt10.25□□□□□ -0.77
VPS36Q06696 ATF2YGR177C 1608 nt10.24□□□□□ -0.77
VPS36Q06696 PTH1YHR189W 573 nt10.23□□□□□ -0.77
VPS36Q06696 GAL1YBR020W 1587 nt10.21□□□□□ -0.78
VPS36Q06696 YLR235CYLR235C 399 nt10.2□□□□□ -0.78
VPS36Q06696 NAR1YNL240C 1476 nt10.2□□□□□ -0.78
VPS36Q06696 GLK1YCL040W 1503 nt10.2□□□□□ -0.78
VPS36Q06696 YFL067WYFL067W 528 nt10.19□□□□□ -0.78
VPS36Q06696 TRM5YHR070W 1500 nt10.18□□□□□ -0.78
Retrieved 100 of 7,029 protein–RNA pairs in 7.5 ms