Protein–RNA interactions for Protein: Q06336

GGA1, ADP-ribosylation factor-binding protein GGA1, yeastyeast

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
GGA1Q06336 SHU1YHL006C 453 nt12.03□□□□□ -0.48
GGA1Q06336 YAL037C-BYAL037C-B 975 nt12□□□□□ -0.49
GGA1Q06336 HOM6YJR139C 1080 nt11.99□□□□□ -0.49
GGA1Q06336 SCC4YER147C 1875 nt11.99□□□□□ -0.49
GGA1Q06336 IRC15YPL017C 1500 nt11.98□□□□□ -0.49
GGA1Q06336 ART5YGR068C 1761 nt11.95□□□□□ -0.5
GGA1Q06336 GFD2YCL036W 1701 nt11.94□□□□□ -0.5
GGA1Q06336 MNP1YGL068W 585 nt11.94□□□□□ -0.5
GGA1Q06336 RTS2YOR077W 699 nt11.93□□□□□ -0.5
GGA1Q06336 GIS3YLR094C 1509 nt11.91□□□□□ -0.5
GGA1Q06336 RKM5YLR137W 1104 nt11.84□□□□□ -0.51
GGA1Q06336 PET9YBL030C 957 nt11.84□□□□□ -0.51
GGA1Q06336 SEC11YIR022W 504 nt11.83□□□□□ -0.52
GGA1Q06336 PCH2YBR186W 1695 nt11.8□□□□□ -0.52
GGA1Q06336 TIR4YOR009W 1464 nt11.79□□□□□ -0.52
GGA1Q06336 YCH1YGR203W 447 nt11.78□□□□□ -0.52
GGA1Q06336 YKL097CYKL097C 411 nt11.78□□□□□ -0.52
GGA1Q06336 YSC84YHR016C 1407 nt11.77□□□□□ -0.53
GGA1Q06336 CUE1YMR264W 612 nt11.75□□□□□ -0.53
GGA1Q06336 GUT2YIL155C 1950 nt11.73□□□□□ -0.53
GGA1Q06336 YMR057CYMR057C 372 nt11.72□□□□□ -0.53
GGA1Q06336 YIL100WYIL100W 354 nt11.68□□□□□ -0.54
GGA1Q06336 YNL195CYNL195C 786 nt11.67□□□□□ -0.54
GGA1Q06336 YJL152WYJL152W 360 nt11.65□□□□□ -0.54
GGA1Q06336 YHL050CYHL050C 2094 nt11.63□□□□□ -0.55
GGA1Q06336 RRT12YCR045C 1476 nt11.62□□□□□ -0.55
GGA1Q06336 MCH5YOR306C 1566 nt11.61□□□□□ -0.55
GGA1Q06336 NPL3YDR432W 1245 nt11.59□□□□□ -0.55
GGA1Q06336 YLR236CYLR236C 324 nt11.58□□□□□ -0.56
GGA1Q06336 BOR1YNL275W 1731 nt11.57□□□□□ -0.56
GGA1Q06336 YLR154C-GYLR154C-G 150 nt11.57□□□□□ -0.56
GGA1Q06336 YOL037CYOL037C 354 nt11.56□□□□□ -0.56
GGA1Q06336 YCL048W-AYCL048W-A 240 nt11.56□□□□□ -0.56
GGA1Q06336 RTF1YGL244W 1677 nt11.52□□□□□ -0.57
GGA1Q06336 RPM1RPM1 483 nt11.48□□□□□ -0.57
GGA1Q06336 BOP3YNL042W 1191 nt11.46□□□□□ -0.57
GGA1Q06336 PIB2YGL023C 1908 nt11.46□□□□□ -0.58
GGA1Q06336 WHI5YOR083W 888 nt11.33□□□□□ -0.6
GGA1Q06336 YOR139CYOR139C 393 nt11.31□□□□□ -0.6
GGA1Q06336 IDH1YNL037C 1083 nt11.28□□□□□ -0.6
GGA1Q06336 PTK1YKL198C 1989 nt11.27□□□□□ -0.61
GGA1Q06336 YLR281CYLR281C 468 nt11.25□□□□□ -0.61
GGA1Q06336 GBP2YCL011C 1284 nt11.23□□□□□ -0.61
GGA1Q06336 NCP1YHR042W 2076 nt11.21□□□□□ -0.61
GGA1Q06336 RRD1YIL153W 1182 nt11.19□□□□□ -0.62
GGA1Q06336 LCB1YMR296C 1677 nt11.18□□□□□ -0.62
GGA1Q06336 TCD2YKL027W 1344 nt11.17□□□□□ -0.62
GGA1Q06336 YFL054CYFL054C 1941 nt11.16□□□□□ -0.62
GGA1Q06336 ALG12YNR030W 1656 nt11.14□□□□□ -0.63
GGA1Q06336 FMP52YER004W 696 nt11.14□□□□□ -0.63
GGA1Q06336 SIM1YIL123W 1431 nt11.1□□□□□ -0.63
GGA1Q06336 PCM1YEL058W 1674 nt11.09□□□□□ -0.63
GGA1Q06336 DED1YOR204W 1815 nt11.08□□□□□ -0.64
GGA1Q06336 PUS2YGL063W 1113 nt11.07□□□□□ -0.64
GGA1Q06336 IMP2'YIL154C 1041 nt11.07□□□□□ -0.64
GGA1Q06336 DSK2YMR276W 1122 nt11.07□□□□□ -0.64
GGA1Q06336 YDR433WYDR433W 441 nt11.06□□□□□ -0.64
GGA1Q06336 CWP1YKL096W 720 nt11.04□□□□□ -0.64
GGA1Q06336 YJL225CYJL225C 5277 nt11.03□□□□□ -0.64
GGA1Q06336 SNF6YHL025W 999 nt11.02□□□□□ -0.65
GGA1Q06336 FMT1YBL013W 1206 nt11.02□□□□□ -0.65
GGA1Q06336 SPT8YLR055C 1809 nt11.02□□□□□ -0.65
GGA1Q06336 ADH2YMR303C 1047 nt11.01□□□□□ -0.65
GGA1Q06336 MXR2YCL033C 507 nt10.99□□□□□ -0.65
GGA1Q06336 BIO4YNR057C 714 nt10.97□□□□□ -0.65
GGA1Q06336 YCL042WYCL042W 360 nt10.95□□□□□ -0.66
GGA1Q06336 FMP45YDL222C 930 nt10.92□□□□□ -0.66
GGA1Q06336 SOR2YDL246C 1074 nt10.9□□□□□ -0.66
GGA1Q06336 tM(CAU)CtM(CAU)C 72 nt10.9□□□□□ -0.66
GGA1Q06336 IMT4tM(CAU)E 72 nt10.9□□□□□ -0.66
GGA1Q06336 IMT3tM(CAU)J3 72 nt10.9□□□□□ -0.66
GGA1Q06336 IMT1tM(CAU)O1 72 nt10.9□□□□□ -0.66
GGA1Q06336 IMT2tM(CAU)P 72 nt10.9□□□□□ -0.66
GGA1Q06336 SOR1YJR159W 1074 nt10.9□□□□□ -0.66
GGA1Q06336 YPR011CYPR011C 981 nt10.89□□□□□ -0.67
GGA1Q06336 LYS4YDR234W 2082 nt10.89□□□□□ -0.67
GGA1Q06336 ERF2YLR246W 1080 nt10.86□□□□□ -0.67
GGA1Q06336 LPX1YOR084W 1164 nt10.86□□□□□ -0.67
GGA1Q06336 SWE1YJL187C 2460 nt10.85□□□□□ -0.67
GGA1Q06336 ERV46YAL042W 1248 nt10.83□□□□□ -0.68
GGA1Q06336 YIH1YCR059C 777 nt10.81□□□□□ -0.68
GGA1Q06336 YKR040CYKR040C 504 nt10.81□□□□□ -0.68
GGA1Q06336 CRR1YLR213C 1269 nt10.81□□□□□ -0.68
GGA1Q06336 HSL7YBR133C 2484 nt10.81□□□□□ -0.68
GGA1Q06336 YLL053CYLL053C 459 nt10.79□□□□□ -0.68
GGA1Q06336 FRD1YEL047C 1413 nt10.78□□□□□ -0.68
GGA1Q06336 NAR1YNL240C 1476 nt10.78□□□□□ -0.68
GGA1Q06336 RNQ1YCL028W 1218 nt10.77□□□□□ -0.69
GGA1Q06336 HSP60YLR259C 1719 nt10.77□□□□□ -0.69
GGA1Q06336 HEM12YDR047W 1089 nt10.74□□□□□ -0.69
GGA1Q06336 YHR056W-AYHR056W-A 435 nt10.73□□□□□ -0.69
GGA1Q06336 HEL2YDR266C 1920 nt10.72□□□□□ -0.69
GGA1Q06336 RDN37-1RDN37-1 5354 nt10.7□□□□□ -0.7
GGA1Q06336 RDN37-2RDN37-2 5354 nt10.7□□□□□ -0.7
GGA1Q06336 DIC1YLR348C 897 nt10.7□□□□□ -0.7
GGA1Q06336 MIC10YCL057C-A 294 nt10.7□□□□□ -0.7
GGA1Q06336 ATF2YGR177C 1608 nt10.69□□□□□ -0.7
GGA1Q06336 SSN3YPL042C 1668 nt10.69□□□□□ -0.7
GGA1Q06336 FTR1YER145C 1215 nt10.68□□□□□ -0.7
GGA1Q06336 YFL067WYFL067W 528 nt10.68□□□□□ -0.7
Retrieved 100 of 7,029 protein–RNA pairs in 10.9 ms