Protein–RNA interactions for Protein: Q06159

ATG39, Autophagy-related protein 39, yeastyeast

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ATG39Q06159 YOR139CYOR139C 393 nt9.69□□□□□ -0.86
ATG39Q06159 YBR220CYBR220C 1683 nt9.69□□□□□ -0.86
ATG39Q06159 GUT2YIL155C 1950 nt9.68□□□□□ -0.86
ATG39Q06159 YOL037CYOL037C 354 nt9.67□□□□□ -0.86
ATG39Q06159 NPL3YDR432W 1245 nt9.66□□□□□ -0.86
ATG39Q06159 PCH2YBR186W 1695 nt9.66□□□□□ -0.86
ATG39Q06159 RPP2AYOL039W 321 nt9.63□□□□□ -0.87
ATG39Q06159 YDL221WYDL221W 552 nt9.62□□□□□ -0.87
ATG39Q06159 SIS1YNL007C 1059 nt9.62□□□□□ -0.87
ATG39Q06159 SDH1YKL148C 1923 nt9.58□□□□□ -0.88
ATG39Q06159 PTP1YDL230W 1008 nt9.58□□□□□ -0.88
ATG39Q06159 BOR1YNL275W 1731 nt9.57□□□□□ -0.88
ATG39Q06159 SEC11YIR022W 504 nt9.54□□□□□ -0.88
ATG39Q06159 RDN37-1RDN37-1 5354 nt9.53□□□□□ -0.88
ATG39Q06159 RDN37-2RDN37-2 5354 nt9.53□□□□□ -0.88
ATG39Q06159 CAC2YML102W 1407 nt9.52□□□□□ -0.89
ATG39Q06159 MCH5YOR306C 1566 nt9.5□□□□□ -0.89
ATG39Q06159 PIB2YGL023C 1908 nt9.48□□□□□ -0.89
ATG39Q06159 ART5YGR068C 1761 nt9.47□□□□□ -0.89
ATG39Q06159 YLR154C-GYLR154C-G 150 nt9.46□□□□□ -0.9
ATG39Q06159 SCC4YER147C 1875 nt9.45□□□□□ -0.9
ATG39Q06159 GFD2YCL036W 1701 nt9.44□□□□□ -0.9
ATG39Q06159 TIR4YOR009W 1464 nt9.43□□□□□ -0.9
ATG39Q06159 YLR281CYLR281C 468 nt9.43□□□□□ -0.9
ATG39Q06159 PET9YBL030C 957 nt9.43□□□□□ -0.9
ATG39Q06159 WHI5YOR083W 888 nt9.43□□□□□ -0.9
ATG39Q06159 YCH1YGR203W 447 nt9.42□□□□□ -0.9
ATG39Q06159 YJL152WYJL152W 360 nt9.41□□□□□ -0.9
ATG39Q06159 IRC15YPL017C 1500 nt9.4□□□□□ -0.91
ATG39Q06159 GIS3YLR094C 1509 nt9.36□□□□□ -0.91
ATG39Q06159 YMR057CYMR057C 372 nt9.35□□□□□ -0.91
ATG39Q06159 RTS2YOR077W 699 nt9.35□□□□□ -0.91
ATG39Q06159 PUS2YGL063W 1113 nt9.32□□□□□ -0.92
ATG39Q06159 tM(CAU)CtM(CAU)C 72 nt9.32□□□□□ -0.92
ATG39Q06159 IMT4tM(CAU)E 72 nt9.32□□□□□ -0.92
ATG39Q06159 IMT3tM(CAU)J3 72 nt9.32□□□□□ -0.92
ATG39Q06159 IMT1tM(CAU)O1 72 nt9.32□□□□□ -0.92
ATG39Q06159 IMT2tM(CAU)P 72 nt9.32□□□□□ -0.92
ATG39Q06159 RTF1YGL244W 1677 nt9.29□□□□□ -0.92
ATG39Q06159 RPM1RPM1 483 nt9.28□□□□□ -0.92
ATG39Q06159 YSC84YHR016C 1407 nt9.26□□□□□ -0.93
ATG39Q06159 CUE1YMR264W 612 nt9.26□□□□□ -0.93
ATG39Q06159 YCL048W-AYCL048W-A 240 nt9.26□□□□□ -0.93
ATG39Q06159 IMP2'YIL154C 1041 nt9.24□□□□□ -0.93
ATG39Q06159 ALG12YNR030W 1656 nt9.23□□□□□ -0.93
ATG39Q06159 DSK2YMR276W 1122 nt9.22□□□□□ -0.93
ATG39Q06159 IDH1YNL037C 1083 nt9.22□□□□□ -0.93
ATG39Q06159 YHL050CYHL050C 2094 nt9.2□□□□□ -0.94
ATG39Q06159 Q0182Q0182 405 nt9.18□□□□□ -0.94
ATG39Q06159 YLR236CYLR236C 324 nt9.18□□□□□ -0.94
ATG39Q06159 YIL100WYIL100W 354 nt9.17□□□□□ -0.94
ATG39Q06159 GBP2YCL011C 1284 nt9.16□□□□□ -0.94
ATG39Q06159 PTK1YKL198C 1989 nt9.15□□□□□ -0.94
ATG39Q06159 YPR011CYPR011C 981 nt9.14□□□□□ -0.95
ATG39Q06159 YNL195CYNL195C 786 nt9.13□□□□□ -0.95
ATG39Q06159 BOP3YNL042W 1191 nt9.12□□□□□ -0.95
ATG39Q06159 RRT12YCR045C 1476 nt9.1□□□□□ -0.95
ATG39Q06159 FMP45YDL222C 930 nt9.09□□□□□ -0.95
ATG39Q06159 YDR433WYDR433W 441 nt9.08□□□□□ -0.96
ATG39Q06159 TCD2YKL027W 1344 nt9.06□□□□□ -0.96
ATG39Q06159 RRD1YIL153W 1182 nt9.04□□□□□ -0.96
ATG39Q06159 ERV46YAL042W 1248 nt9.03□□□□□ -0.96
ATG39Q06159 LPX1YOR084W 1164 nt9.03□□□□□ -0.96
ATG39Q06159 HSP60YLR259C 1719 nt9.02□□□□□ -0.96
ATG39Q06159 MXR2YCL033C 507 nt9□□□□□ -0.97
ATG39Q06159 DED1YOR204W 1815 nt8.99□□□□□ -0.97
ATG39Q06159 YKR040CYKR040C 504 nt8.98□□□□□ -0.97
ATG39Q06159 FMP52YER004W 696 nt8.96□□□□□ -0.98
ATG39Q06159 NCP1YHR042W 2076 nt8.94□□□□□ -0.98
ATG39Q06159 FMT1YBL013W 1206 nt8.93□□□□□ -0.98
ATG39Q06159 MOT3YMR070W 1473 nt8.93□□□□□ -0.98
ATG39Q06159 SPT8YLR055C 1809 nt8.93□□□□□ -0.98
ATG39Q06159 NAR1YNL240C 1476 nt8.91□□□□□ -0.98
ATG39Q06159 HSL7YBR133C 2484 nt8.89□□□□□ -0.99
ATG39Q06159 YCL042WYCL042W 360 nt8.89□□□□□ -0.99
ATG39Q06159 SOR2YDL246C 1074 nt8.87□□□□□ -0.99
ATG39Q06159 SOR1YJR159W 1074 nt8.87□□□□□ -0.99
ATG39Q06159 CWP1YKL096W 720 nt8.87□□□□□ -0.99
ATG39Q06159 YFL054CYFL054C 1941 nt8.86□□□□□ -0.99
ATG39Q06159 PCM1YEL058W 1674 nt8.86□□□□□ -0.99
ATG39Q06159 ADH2YMR303C 1047 nt8.86□□□□□ -0.99
ATG39Q06159 FRD1YEL047C 1413 nt8.86□□□□□ -0.99
ATG39Q06159 SNF6YHL025W 999 nt8.82□□□□□ -1
ATG39Q06159 RDN25-1RDN25-1 3396 nt8.81□□□□□ -1
ATG39Q06159 RDN25-2RDN25-2 3396 nt8.81□□□□□ -1
ATG39Q06159 SPP1YPL138C 1062 nt8.81□□□□□ -1
ATG39Q06159 GLK1YCL040W 1503 nt8.78□□□□□ -1
ATG39Q06159 CMP2YML057W 1815 nt8.77□□□□□ -1
ATG39Q06159 LCB1YMR296C 1677 nt8.77□□□□□ -1.01
ATG39Q06159 SIM1YIL123W 1431 nt8.77□□□□□ -1.01
ATG39Q06159 YIH1YCR059C 777 nt8.71□□□□□ -1.02
ATG39Q06159 BIO4YNR057C 714 nt8.71□□□□□ -1.02
ATG39Q06159 HEL2YDR266C 1920 nt8.7□□□□□ -1.02
ATG39Q06159 PTH1YHR189W 573 nt8.69□□□□□ -1.02
ATG39Q06159 RNQ1YCL028W 1218 nt8.69□□□□□ -1.02
ATG39Q06159 DIC1YLR348C 897 nt8.68□□□□□ -1.02
ATG39Q06159 YLR235CYLR235C 399 nt8.67□□□□□ -1.02
ATG39Q06159 SWE1YJL187C 2460 nt8.64□□□□□ -1.03
ATG39Q06159 YLL053CYLL053C 459 nt8.64□□□□□ -1.03
ATG39Q06159 CYT2YKL087C 675 nt8.63□□□□□ -1.03
Retrieved 100 of 7,029 protein–RNA pairs in 9.5 ms