Protein–RNA interactions for Protein: Q04437

YKU80, ATP-dependent DNA helicase II subunit 2, yeastyeast

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YKU80Q04437 GIS3YLR094C 1509 nt12.03□□□□□ -0.48
YKU80Q04437 YSC84YHR016C 1407 nt12.03□□□□□ -0.48
YKU80Q04437 LSM3YLR438C-A 270 nt12.02□□□□□ -0.49
YKU80Q04437 FPS1YLL043W 2010 nt12.01□□□□□ -0.49
YKU80Q04437 RTF1YGL244W 1677 nt12□□□□□ -0.49
YKU80Q04437 YKL097CYKL097C 411 nt11.97□□□□□ -0.49
YKU80Q04437 CCT6YDR188W 1641 nt11.97□□□□□ -0.49
YKU80Q04437 YHL050CYHL050C 2094 nt11.96□□□□□ -0.49
YKU80Q04437 SUF2tP(AGG)C 72 nt11.94□□□□□ -0.5
YKU80Q04437 SUF10tP(AGG)N 72 nt11.94□□□□□ -0.5
YKU80Q04437 YGR021WYGR021W 873 nt11.93□□□□□ -0.5
YKU80Q04437 YFL021C-AYFL021C-A 855 nt11.91□□□□□ -0.5
YKU80Q04437 YAL037C-BYAL037C-B 975 nt11.89□□□□□ -0.51
YKU80Q04437 PTK1YKL198C 1989 nt11.88□□□□□ -0.51
YKU80Q04437 SIS1YNL007C 1059 nt11.87□□□□□ -0.51
YKU80Q04437 UME6YDR207C 2511 nt11.85□□□□□ -0.51
YKU80Q04437 BOP3YNL042W 1191 nt11.84□□□□□ -0.51
YKU80Q04437 HOM6YJR139C 1080 nt11.83□□□□□ -0.52
YKU80Q04437 RRT12YCR045C 1476 nt11.8□□□□□ -0.52
YKU80Q04437 GFD2YCL036W 1701 nt11.78□□□□□ -0.52
YKU80Q04437 BOR1YNL275W 1731 nt11.74□□□□□ -0.53
YKU80Q04437 MNP1YGL068W 585 nt11.74□□□□□ -0.53
YKU80Q04437 RTS2YOR077W 699 nt11.74□□□□□ -0.53
YKU80Q04437 ART5YGR068C 1761 nt11.74□□□□□ -0.53
YKU80Q04437 RKM5YLR137W 1104 nt11.67□□□□□ -0.54
YKU80Q04437 PET9YBL030C 957 nt11.65□□□□□ -0.54
YKU80Q04437 CUE1YMR264W 612 nt11.64□□□□□ -0.55
YKU80Q04437 NCP1YHR042W 2076 nt11.61□□□□□ -0.55
YKU80Q04437 YCH1YGR203W 447 nt11.59□□□□□ -0.55
YKU80Q04437 YNL195CYNL195C 786 nt11.59□□□□□ -0.55
YKU80Q04437 TIR4YOR009W 1464 nt11.56□□□□□ -0.56
YKU80Q04437 YFL054CYFL054C 1941 nt11.54□□□□□ -0.56
YKU80Q04437 SPT8YLR055C 1809 nt11.54□□□□□ -0.56
YKU80Q04437 YMR057CYMR057C 372 nt11.52□□□□□ -0.57
YKU80Q04437 YOL037CYOL037C 354 nt11.52□□□□□ -0.57
YKU80Q04437 YJL225CYJL225C 5277 nt11.51□□□□□ -0.57
YKU80Q04437 YOR139CYOR139C 393 nt11.51□□□□□ -0.57
YKU80Q04437 YJL152WYJL152W 360 nt11.47□□□□□ -0.57
YKU80Q04437 NPL3YDR432W 1245 nt11.46□□□□□ -0.57
YKU80Q04437 MCH5YOR306C 1566 nt11.45□□□□□ -0.58
YKU80Q04437 YIL100WYIL100W 354 nt11.45□□□□□ -0.58
YKU80Q04437 YLR154C-GYLR154C-G 150 nt11.41□□□□□ -0.58
YKU80Q04437 HSP60YLR259C 1719 nt11.38□□□□□ -0.59
YKU80Q04437 YLR236CYLR236C 324 nt11.36□□□□□ -0.59
YKU80Q04437 YCL048W-AYCL048W-A 240 nt11.36□□□□□ -0.59
YKU80Q04437 ALG12YNR030W 1656 nt11.36□□□□□ -0.59
YKU80Q04437 SWE1YJL187C 2460 nt11.28□□□□□ -0.6
YKU80Q04437 LCB1YMR296C 1677 nt11.27□□□□□ -0.61
YKU80Q04437 YLR281CYLR281C 468 nt11.24□□□□□ -0.61
YKU80Q04437 WHI5YOR083W 888 nt11.22□□□□□ -0.61
YKU80Q04437 GLK1YCL040W 1503 nt11.17□□□□□ -0.62
YKU80Q04437 IDH1YNL037C 1083 nt11.12□□□□□ -0.63
YKU80Q04437 tM(CAU)CtM(CAU)C 72 nt11.08□□□□□ -0.64
YKU80Q04437 IMT4tM(CAU)E 72 nt11.08□□□□□ -0.64
YKU80Q04437 IMT3tM(CAU)J3 72 nt11.08□□□□□ -0.64
YKU80Q04437 IMT1tM(CAU)O1 72 nt11.08□□□□□ -0.64
YKU80Q04437 IMT2tM(CAU)P 72 nt11.08□□□□□ -0.64
YKU80Q04437 GBP2YCL011C 1284 nt11.08□□□□□ -0.64
YKU80Q04437 PUS2YGL063W 1113 nt11.07□□□□□ -0.64
YKU80Q04437 LYS4YDR234W 2082 nt11.06□□□□□ -0.64
YKU80Q04437 IMP2'YIL154C 1041 nt11.02□□□□□ -0.65
YKU80Q04437 NAR1YNL240C 1476 nt11.01□□□□□ -0.65
YKU80Q04437 RRD1YIL153W 1182 nt11.01□□□□□ -0.65
YKU80Q04437 FUR4YBR021W 1902 nt11□□□□□ -0.65
YKU80Q04437 TCD2YKL027W 1344 nt10.99□□□□□ -0.65
YKU80Q04437 DSK2YMR276W 1122 nt10.97□□□□□ -0.65
YKU80Q04437 FMP52YER004W 696 nt10.95□□□□□ -0.66
YKU80Q04437 BIO4YNR057C 714 nt10.94□□□□□ -0.66
YKU80Q04437 DED1YOR204W 1815 nt10.93□□□□□ -0.66
YKU80Q04437 YDR433WYDR433W 441 nt10.91□□□□□ -0.66
YKU80Q04437 AAC1YMR056C 930 nt10.91□□□□□ -0.66
YKU80Q04437 RDN37-1RDN37-1 5354 nt10.91□□□□□ -0.66
YKU80Q04437 RDN37-2RDN37-2 5354 nt10.91□□□□□ -0.66
YKU80Q04437 PCM1YEL058W 1674 nt10.91□□□□□ -0.66
YKU80Q04437 SIM1YIL123W 1431 nt10.9□□□□□ -0.66
YKU80Q04437 PRP4YPR178W 1398 nt10.9□□□□□ -0.67
YKU80Q04437 YPR011CYPR011C 981 nt10.88□□□□□ -0.67
YKU80Q04437 YEL076C-AYEL076C-A 651 nt10.86□□□□□ -0.67
YKU80Q04437 YEL076CYEL076C 651 nt10.86□□□□□ -0.67
YKU80Q04437 YLR464WYLR464W 651 nt10.86□□□□□ -0.67
YKU80Q04437 FMT1YBL013W 1206 nt10.86□□□□□ -0.67
YKU80Q04437 CWP1YKL096W 720 nt10.85□□□□□ -0.67
YKU80Q04437 DPS1YLL018C 1674 nt10.85□□□□□ -0.67
YKU80Q04437 SNF6YHL025W 999 nt10.83□□□□□ -0.68
YKU80Q04437 ADH2YMR303C 1047 nt10.83□□□□□ -0.68
YKU80Q04437 BIO5YNR056C 1686 nt10.82□□□□□ -0.68
YKU80Q04437 MXR2YCL033C 507 nt10.82□□□□□ -0.68
YKU80Q04437 FMP45YDL222C 930 nt10.81□□□□□ -0.68
YKU80Q04437 PBP1YGR178C 2169 nt10.81□□□□□ -0.68
YKU80Q04437 YCL042WYCL042W 360 nt10.79□□□□□ -0.68
YKU80Q04437 ERV46YAL042W 1248 nt10.78□□□□□ -0.68
YKU80Q04437 CYT2YKL087C 675 nt10.75□□□□□ -0.69
YKU80Q04437 SNF1YDR477W 1902 nt10.75□□□□□ -0.69
YKU80Q04437 CCA1YER168C 1641 nt10.73□□□□□ -0.69
YKU80Q04437 YHR056W-AYHR056W-A 435 nt10.73□□□□□ -0.69
YKU80Q04437 LPX1YOR084W 1164 nt10.73□□□□□ -0.69
YKU80Q04437 RPM1RPM1 483 nt10.72□□□□□ -0.69
YKU80Q04437 SOR2YDL246C 1074 nt10.71□□□□□ -0.69
YKU80Q04437 SOR1YJR159W 1074 nt10.71□□□□□ -0.69
YKU80Q04437 YKR040CYKR040C 504 nt10.71□□□□□ -0.69
Retrieved 100 of 7,029 protein–RNA pairs in 16.3 ms