Protein–RNA interactions for Protein: Q01560

NPL3, Nucleolar protein 3, yeastyeast

Known RBP RIP-Chip data

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NPL3Q01560 IMT3tM(CAU)J3 72 nt12.15□□□□□ -0.46
NPL3Q01560 IMT1tM(CAU)O1 72 nt12.15□□□□□ -0.46
NPL3Q01560 IMT2tM(CAU)P 72 nt12.15□□□□□ -0.46
NPL3Q01560 RPP2AYOL039W 321 nt12.14□□□□□ -0.47
NPL3Q01560 YLR154C-GYLR154C-G 150 nt12.13□□□□□ -0.47
NPL3Q01560 PUS2YGL063W 1113 nt12.11□□□□□ -0.47
NPL3Q01560 YJL152WYJL152W 360 nt12.05□□□□□ -0.48
NPL3Q01560 PTP1YDL230W 1008 nt12.03□□□□□ -0.48
NPL3Q01560 DCW1YKL046C 1350 nt12.03□□□□□ -0.48
NPL3Q01560 TIR4YOR009W 1464 nt11.98□□□□□ -0.49
NPL3Q01560 ART5YGR068C 1761 nt11.96□□□□□ -0.49
NPL3Q01560 YCH1YGR203W 447 nt11.94□□□□□ -0.5 RIP-Chip
NPL3Q01560 IMP2'YIL154C 1041 nt11.94□□□□□ -0.5 RIP-Chip
NPL3Q01560 BDF1YLR399C 2061 nt11.93□□□□□ -0.5
NPL3Q01560 PET9YBL030C 957 nt11.93□□□□□ -0.5
NPL3Q01560 DSK2YMR276W 1122 nt11.93□□□□□ -0.5 RIP-Chip
NPL3Q01560 CAC2YML102W 1407 nt11.93□□□□□ -0.5
NPL3Q01560 EMI2YDR516C 1503 nt11.91□□□□□ -0.5 RIP-Chip
NPL3Q01560 GFD2YCL036W 1701 nt11.91□□□□□ -0.5
NPL3Q01560 YMR090WYMR090W 684 nt11.88□□□□□ -0.51
NPL3Q01560 YMR057CYMR057C 372 nt11.85□□□□□ -0.51
NPL3Q01560 IDH1YNL037C 1083 nt11.85□□□□□ -0.51
NPL3Q01560 YLR236CYLR236C 324 nt11.84□□□□□ -0.51
NPL3Q01560 PAC11YDR488C 1602 nt11.84□□□□□ -0.51
NPL3Q01560 YDL221WYDL221W 552 nt11.83□□□□□ -0.52
NPL3Q01560 FMP45YDL222C 930 nt11.82□□□□□ -0.52
NPL3Q01560 YPR011CYPR011C 981 nt11.81□□□□□ -0.52
NPL3Q01560 YCL048W-AYCL048W-A 240 nt11.81□□□□□ -0.52
NPL3Q01560 RTS2YOR077W 699 nt11.79□□□□□ -0.52
NPL3Q01560 TAT1YBR069C 1860 nt11.78□□□□□ -0.52
NPL3Q01560 IRC15YPL017C 1500 nt11.75□□□□□ -0.53
NPL3Q01560 GBP2YCL011C 1284 nt11.74□□□□□ -0.53
NPL3Q01560 YDR433WYDR433W 441 nt11.7□□□□□ -0.54 RIP-Chip
NPL3Q01560 GIS3YLR094C 1509 nt11.67□□□□□ -0.54 RIP-Chip
NPL3Q01560 CUE1YMR264W 612 nt11.67□□□□□ -0.54 RIP-Chip
NPL3Q01560 LPX1YOR084W 1164 nt11.66□□□□□ -0.54 RIP-Chip
NPL3Q01560 SDH1YKL148C 1923 nt11.66□□□□□ -0.54
NPL3Q01560 ERV46YAL042W 1248 nt11.65□□□□□ -0.54
NPL3Q01560 FPS1YLL043W 2010 nt11.65□□□□□ -0.54
NPL3Q01560 YBR220CYBR220C 1683 nt11.62□□□□□ -0.55
NPL3Q01560 SCC4YER147C 1875 nt11.61□□□□□ -0.55
NPL3Q01560 TCD2YKL027W 1344 nt11.6□□□□□ -0.55
NPL3Q01560 YIL100WYIL100W 354 nt11.57□□□□□ -0.56
NPL3Q01560 YKR040CYKR040C 504 nt11.57□□□□□ -0.56
NPL3Q01560 MXR2YCL033C 507 nt11.56□□□□□ -0.56
NPL3Q01560 MRPL8YJL063C 717 nt11.53□□□□□ -0.56 RIP-Chip
NPL3Q01560 RRD1YIL153W 1182 nt11.5□□□□□ -0.57
NPL3Q01560 DED1YOR204W 1815 nt11.46□□□□□ -0.58
NPL3Q01560 YNL195CYNL195C 786 nt11.42□□□□□ -0.58
NPL3Q01560 SPP1YPL138C 1062 nt11.42□□□□□ -0.58
NPL3Q01560 NVJ2YPR091C 2313 nt11.41□□□□□ -0.58
NPL3Q01560 YCL042WYCL042W 360 nt11.39□□□□□ -0.59 RIP-Chip
NPL3Q01560 FMP52YER004W 696 nt11.38□□□□□ -0.59 RIP-Chip
NPL3Q01560 FMT1YBL013W 1206 nt11.36□□□□□ -0.59
NPL3Q01560 FRD1YEL047C 1413 nt11.35□□□□□ -0.59
NPL3Q01560 SOR2YDL246C 1074 nt11.33□□□□□ -0.6
NPL3Q01560 SOR1YJR159W 1074 nt11.33□□□□□ -0.6
NPL3Q01560 UBX6YJL048C 1191 nt11.32□□□□□ -0.6 RIP-Chip
NPL3Q01560 YSC84YHR016C 1407 nt11.31□□□□□ -0.6
NPL3Q01560 CWP1YKL096W 720 nt11.3□□□□□ -0.6
NPL3Q01560 RRT12YCR045C 1476 nt11.28□□□□□ -0.6
NPL3Q01560 ADH2YMR303C 1047 nt11.26□□□□□ -0.61
NPL3Q01560 SEC11YIR022W 504 nt11.25□□□□□ -0.61
NPL3Q01560 ADO1YJR105W 1023 nt11.25□□□□□ -0.61
NPL3Q01560 YEL076C-AYEL076C-A 651 nt11.24□□□□□ -0.61
NPL3Q01560 YEL076CYEL076C 651 nt11.24□□□□□ -0.61
NPL3Q01560 YLR464WYLR464W 651 nt11.24□□□□□ -0.61
NPL3Q01560 PCH2YBR186W 1695 nt11.24□□□□□ -0.61
NPL3Q01560 PCM1YEL058W 1674 nt11.23□□□□□ -0.61
NPL3Q01560 YHL050CYHL050C 2094 nt11.21□□□□□ -0.61
NPL3Q01560 SNF6YHL025W 999 nt11.21□□□□□ -0.61 RIP-Chip
NPL3Q01560 RTG1YOL067C 534 nt11.21□□□□□ -0.61 RIP-Chip
NPL3Q01560 PTH1YHR189W 573 nt11.2□□□□□ -0.62 RIP-Chip
NPL3Q01560 YLR235CYLR235C 399 nt11.18□□□□□ -0.62
NPL3Q01560 GUT2YIL155C 1950 nt11.17□□□□□ -0.62
NPL3Q01560 YJL225CYJL225C 5277 nt11.17□□□□□ -0.62
NPL3Q01560 NME1NME1 340 nt11.15□□□□□ -0.62
NPL3Q01560 YKL030WYKL030W 606 nt11.11□□□□□ -0.63
NPL3Q01560 DIC1YLR348C 897 nt11.09□□□□□ -0.63
NPL3Q01560 HUA1YGR268C 597 nt11.08□□□□□ -0.64 RIP-Chip
NPL3Q01560 SIM1YIL123W 1431 nt11.07□□□□□ -0.64
NPL3Q01560 YIH1YCR059C 777 nt11.06□□□□□ -0.64 RIP-Chip
NPL3Q01560 RNQ1YCL028W 1218 nt11.06□□□□□ -0.64 RIP-Chip
NPL3Q01560 LCB1YMR296C 1677 nt11.04□□□□□ -0.64
NPL3Q01560 YFL015W-AYFL015W-A 318 nt11.03□□□□□ -0.64
NPL3Q01560 TIM23YNR017W 669 nt11.03□□□□□ -0.64
NPL3Q01560 BIO4YNR057C 714 nt11.02□□□□□ -0.65
NPL3Q01560 YLR179CYLR179C 606 nt10.98□□□□□ -0.65
NPL3Q01560 YDR094WYDR094W 336 nt10.97□□□□□ -0.65
NPL3Q01560 YLL053CYLL053C 459 nt10.97□□□□□ -0.65
NPL3Q01560 BOP3YNL042W 1191 nt10.94□□□□□ -0.66 RIP-Chip
NPL3Q01560 RTF1YGL244W 1677 nt10.92□□□□□ -0.66
NPL3Q01560 FTR1YER145C 1215 nt10.9□□□□□ -0.66
NPL3Q01560 YPR064WYPR064W 420 nt10.89□□□□□ -0.67
NPL3Q01560 AQY1YPR192W 918 nt10.88□□□□□ -0.67
NPL3Q01560 ERF2YLR246W 1080 nt10.87□□□□□ -0.67
NPL3Q01560 NCP1YHR042W 2076 nt10.86□□□□□ -0.67
NPL3Q01560 GAL1YBR020W 1587 nt10.86□□□□□ -0.67
NPL3Q01560 PIB2YGL023C 1908 nt10.84□□□□□ -0.67
NPL3Q01560 TRM5YHR070W 1500 nt10.84□□□□□ -0.67 RIP-Chip
Retrieved 100 of 7,029 protein–RNA pairs in 16.9 ms