Protein–RNA interactions for Protein: P51534

SHE4, SWI5-dependent HO expression protein 4, yeastyeast

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHE4P51534 ALF1YNL148C 765 nt11.7□□□□□ -0.54
SHE4P51534 FUN26YAL022C 1554 nt11.69□□□□□ -0.54
SHE4P51534 YGR021WYGR021W 873 nt11.66□□□□□ -0.54
SHE4P51534 YAL037C-BYAL037C-B 975 nt11.66□□□□□ -0.54
SHE4P51534 YSC84YHR016C 1407 nt11.66□□□□□ -0.54
SHE4P51534 GIS3YLR094C 1509 nt11.65□□□□□ -0.54
SHE4P51534 RTF1YGL244W 1677 nt11.65□□□□□ -0.55
SHE4P51534 HOM6YJR139C 1080 nt11.64□□□□□ -0.55
SHE4P51534 LSM3YLR438C-A 270 nt11.62□□□□□ -0.55
SHE4P51534 BOR1YNL275W 1731 nt11.6□□□□□ -0.55
SHE4P51534 YFL021C-AYFL021C-A 855 nt11.59□□□□□ -0.55
SHE4P51534 YHL050CYHL050C 2094 nt11.57□□□□□ -0.56
SHE4P51534 SIS1YNL007C 1059 nt11.55□□□□□ -0.56
SHE4P51534 TRM9YML014W 840 nt11.53□□□□□ -0.56
SHE4P51534 BOP3YNL042W 1191 nt11.53□□□□□ -0.56
SHE4P51534 MOT3YMR070W 1473 nt11.52□□□□□ -0.56
SHE4P51534 MNP1YGL068W 585 nt11.51□□□□□ -0.57
SHE4P51534 CCT6YDR188W 1641 nt11.5□□□□□ -0.57
SHE4P51534 MCH5YOR306C 1566 nt11.48□□□□□ -0.57
SHE4P51534 RDN37-1RDN37-1 5354 nt11.47□□□□□ -0.57
SHE4P51534 RDN37-2RDN37-2 5354 nt11.47□□□□□ -0.57
SHE4P51534 PTK1YKL198C 1989 nt11.47□□□□□ -0.57
SHE4P51534 GFD2YCL036W 1701 nt11.46□□□□□ -0.58
SHE4P51534 SUF2tP(AGG)C 72 nt11.45□□□□□ -0.58
SHE4P51534 SUF10tP(AGG)N 72 nt11.45□□□□□ -0.58
SHE4P51534 RKM5YLR137W 1104 nt11.45□□□□□ -0.58
SHE4P51534 ART5YGR068C 1761 nt11.4□□□□□ -0.58
SHE4P51534 RRT12YCR045C 1476 nt11.39□□□□□ -0.59
SHE4P51534 RTS2YOR077W 699 nt11.39□□□□□ -0.59
SHE4P51534 YNL195CYNL195C 786 nt11.36□□□□□ -0.59
SHE4P51534 YOR139CYOR139C 393 nt11.35□□□□□ -0.59
SHE4P51534 CUE1YMR264W 612 nt11.34□□□□□ -0.59
SHE4P51534 PET9YBL030C 957 nt11.33□□□□□ -0.6
SHE4P51534 YOL037CYOL037C 354 nt11.31□□□□□ -0.6
SHE4P51534 NCP1YHR042W 2076 nt11.23□□□□□ -0.61
SHE4P51534 YCH1YGR203W 447 nt11.23□□□□□ -0.61
SHE4P51534 NPL3YDR432W 1245 nt11.21□□□□□ -0.61
SHE4P51534 YIL100WYIL100W 354 nt11.21□□□□□ -0.61
SHE4P51534 YFL054CYFL054C 1941 nt11.2□□□□□ -0.62
SHE4P51534 SPT8YLR055C 1809 nt11.19□□□□□ -0.62
SHE4P51534 ALG12YNR030W 1656 nt11.15□□□□□ -0.62
SHE4P51534 TIR4YOR009W 1464 nt11.11□□□□□ -0.63
SHE4P51534 YLR154C-GYLR154C-G 150 nt11.07□□□□□ -0.64
SHE4P51534 YLR281CYLR281C 468 nt11.07□□□□□ -0.64
SHE4P51534 YLR236CYLR236C 324 nt11.04□□□□□ -0.64
SHE4P51534 YMR057CYMR057C 372 nt11.02□□□□□ -0.65
SHE4P51534 WHI5YOR083W 888 nt11.02□□□□□ -0.65
SHE4P51534 HSP60YLR259C 1719 nt11□□□□□ -0.65
SHE4P51534 SWE1YJL187C 2460 nt10.93□□□□□ -0.66
SHE4P51534 tM(CAU)CtM(CAU)C 72 nt10.92□□□□□ -0.66
SHE4P51534 IMT4tM(CAU)E 72 nt10.92□□□□□ -0.66
SHE4P51534 IMT3tM(CAU)J3 72 nt10.92□□□□□ -0.66
SHE4P51534 IMT1tM(CAU)O1 72 nt10.92□□□□□ -0.66
SHE4P51534 IMT2tM(CAU)P 72 nt10.92□□□□□ -0.66
SHE4P51534 LCB1YMR296C 1677 nt10.92□□□□□ -0.66
SHE4P51534 YJL152WYJL152W 360 nt10.91□□□□□ -0.66
SHE4P51534 PUS2YGL063W 1113 nt10.84□□□□□ -0.67
SHE4P51534 GLK1YCL040W 1503 nt10.83□□□□□ -0.68
SHE4P51534 RPM1RPM1 483 nt10.81□□□□□ -0.68
SHE4P51534 IMP2'YIL154C 1041 nt10.8□□□□□ -0.68
SHE4P51534 NAR1YNL240C 1476 nt10.8□□□□□ -0.68
SHE4P51534 DSK2YMR276W 1122 nt10.78□□□□□ -0.68
SHE4P51534 YCL048W-AYCL048W-A 240 nt10.78□□□□□ -0.68
SHE4P51534 IDH1YNL037C 1083 nt10.75□□□□□ -0.69
SHE4P51534 YPR011CYPR011C 981 nt10.75□□□□□ -0.69
SHE4P51534 LYS4YDR234W 2082 nt10.72□□□□□ -0.69
SHE4P51534 GBP2YCL011C 1284 nt10.68□□□□□ -0.7
SHE4P51534 RRD1YIL153W 1182 nt10.67□□□□□ -0.7
SHE4P51534 HSL7YBR133C 2484 nt10.66□□□□□ -0.7
SHE4P51534 FUR4YBR021W 1902 nt10.66□□□□□ -0.7
SHE4P51534 DED1YOR204W 1815 nt10.64□□□□□ -0.71
SHE4P51534 BIO4YNR057C 714 nt10.64□□□□□ -0.71
SHE4P51534 CMP2YML057W 1815 nt10.63□□□□□ -0.71
SHE4P51534 ERV46YAL042W 1248 nt10.63□□□□□ -0.71
SHE4P51534 SIM1YIL123W 1431 nt10.61□□□□□ -0.71
SHE4P51534 FMP45YDL222C 930 nt10.61□□□□□ -0.71
SHE4P51534 AAC1YMR056C 930 nt10.61□□□□□ -0.71
SHE4P51534 TCD2YKL027W 1344 nt10.58□□□□□ -0.71
SHE4P51534 PRP4YPR178W 1398 nt10.57□□□□□ -0.72
SHE4P51534 YDR433WYDR433W 441 nt10.56□□□□□ -0.72
SHE4P51534 FMP52YER004W 696 nt10.56□□□□□ -0.72
SHE4P51534 LPX1YOR084W 1164 nt10.56□□□□□ -0.72
SHE4P51534 YEL076C-AYEL076C-A 651 nt10.54□□□□□ -0.72
SHE4P51534 YEL076CYEL076C 651 nt10.54□□□□□ -0.72
SHE4P51534 YLR464WYLR464W 651 nt10.54□□□□□ -0.72
SHE4P51534 FMT1YBL013W 1206 nt10.54□□□□□ -0.72
SHE4P51534 MXR2YCL033C 507 nt10.52□□□□□ -0.73
SHE4P51534 DPS1YLL018C 1674 nt10.52□□□□□ -0.73
SHE4P51534 HEL2YDR266C 1920 nt10.52□□□□□ -0.73
SHE4P51534 YKR040CYKR040C 504 nt10.51□□□□□ -0.73
SHE4P51534 PCM1YEL058W 1674 nt10.49□□□□□ -0.73
SHE4P51534 SOR2YDL246C 1074 nt10.47□□□□□ -0.73
SHE4P51534 SOR1YJR159W 1074 nt10.47□□□□□ -0.73
SHE4P51534 RDN25-1RDN25-1 3396 nt10.47□□□□□ -0.73
SHE4P51534 RDN25-2RDN25-2 3396 nt10.47□□□□□ -0.73
SHE4P51534 YHR056W-AYHR056W-A 435 nt10.45□□□□□ -0.74
SHE4P51534 BMT6YLR063W 1098 nt10.45□□□□□ -0.74
SHE4P51534 CYT2YKL087C 675 nt10.43□□□□□ -0.74
SHE4P51534 FRD1YEL047C 1413 nt10.42□□□□□ -0.74
SHE4P51534 PBP1YGR178C 2169 nt10.42□□□□□ -0.74
Retrieved 100 of 7,029 protein–RNA pairs in 11.4 ms