Protein–RNA interactions for Protein: P40541

IRR1, Cohesin subunit SCC3, yeastyeast

Predictions only

Length 1,150 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
IRR1P40541 YLR281CYLR281C 468 nt12.3□□□□□ -0.44
IRR1P40541 tM(CAU)CtM(CAU)C 72 nt12.28□□□□□ -0.44
IRR1P40541 IMT4tM(CAU)E 72 nt12.28□□□□□ -0.44
IRR1P40541 IMT3tM(CAU)J3 72 nt12.28□□□□□ -0.44
IRR1P40541 IMT1tM(CAU)O1 72 nt12.28□□□□□ -0.44
IRR1P40541 IMT2tM(CAU)P 72 nt12.28□□□□□ -0.44
IRR1P40541 SIS1YNL007C 1059 nt12.24□□□□□ -0.45
IRR1P40541 WHI5YOR083W 888 nt12.24□□□□□ -0.45
IRR1P40541 NVJ2YPR091C 2313 nt12.23□□□□□ -0.45
IRR1P40541 YBR220CYBR220C 1683 nt12.2□□□□□ -0.46
IRR1P40541 YLR154C-GYLR154C-G 150 nt12.18□□□□□ -0.46
IRR1P40541 RPP2AYOL039W 321 nt12.18□□□□□ -0.46
IRR1P40541 PUS2YGL063W 1113 nt12.17□□□□□ -0.46
IRR1P40541 PTP1YDL230W 1008 nt12.13□□□□□ -0.47
IRR1P40541 EMI2YDR516C 1503 nt12.11□□□□□ -0.47
IRR1P40541 YMR090WYMR090W 684 nt12.05□□□□□ -0.48
IRR1P40541 TIR4YOR009W 1464 nt12.02□□□□□ -0.48
IRR1P40541 IMP2'YIL154C 1041 nt12.02□□□□□ -0.49
IRR1P40541 YJL152WYJL152W 360 nt12.01□□□□□ -0.49
IRR1P40541 ART5YGR068C 1761 nt12□□□□□ -0.49
IRR1P40541 YCH1YGR203W 447 nt11.99□□□□□ -0.49
IRR1P40541 DSK2YMR276W 1122 nt11.99□□□□□ -0.49
IRR1P40541 CAC2YML102W 1407 nt11.98□□□□□ -0.49
IRR1P40541 PET9YBL030C 957 nt11.98□□□□□ -0.49
IRR1P40541 SDH1YKL148C 1923 nt11.98□□□□□ -0.49
IRR1P40541 GFD2YCL036W 1701 nt11.95□□□□□ -0.5
IRR1P40541 PCH2YBR186W 1695 nt11.95□□□□□ -0.5
IRR1P40541 YDL221WYDL221W 552 nt11.94□□□□□ -0.5
IRR1P40541 YPR011CYPR011C 981 nt11.94□□□□□ -0.5
IRR1P40541 GUT2YIL155C 1950 nt11.94□□□□□ -0.5
IRR1P40541 YLR236CYLR236C 324 nt11.93□□□□□ -0.5
IRR1P40541 YMR057CYMR057C 372 nt11.87□□□□□ -0.51
IRR1P40541 IDH1YNL037C 1083 nt11.87□□□□□ -0.51
IRR1P40541 FMP45YDL222C 930 nt11.85□□□□□ -0.51
IRR1P40541 IRC15YPL017C 1500 nt11.82□□□□□ -0.52
IRR1P40541 SEC11YIR022W 504 nt11.82□□□□□ -0.52
IRR1P40541 PIB2YGL023C 1908 nt11.78□□□□□ -0.52
IRR1P40541 YCL048W-AYCL048W-A 240 nt11.77□□□□□ -0.53
IRR1P40541 SCC4YER147C 1875 nt11.76□□□□□ -0.53
IRR1P40541 ERV46YAL042W 1248 nt11.76□□□□□ -0.53
IRR1P40541 RTS2YOR077W 699 nt11.76□□□□□ -0.53
IRR1P40541 GBP2YCL011C 1284 nt11.75□□□□□ -0.53
IRR1P40541 GIS3YLR094C 1509 nt11.72□□□□□ -0.53
IRR1P40541 LPX1YOR084W 1164 nt11.72□□□□□ -0.53
IRR1P40541 YJL225CYJL225C 5277 nt11.72□□□□□ -0.53
IRR1P40541 CUE1YMR264W 612 nt11.71□□□□□ -0.53
IRR1P40541 YDR433WYDR433W 441 nt11.69□□□□□ -0.54
IRR1P40541 YKR040CYKR040C 504 nt11.65□□□□□ -0.54
IRR1P40541 TCD2YKL027W 1344 nt11.62□□□□□ -0.55
IRR1P40541 YSC84YHR016C 1407 nt11.61□□□□□ -0.55
IRR1P40541 MXR2YCL033C 507 nt11.6□□□□□ -0.55
IRR1P40541 RRD1YIL153W 1182 nt11.59□□□□□ -0.55
IRR1P40541 RTF1YGL244W 1677 nt11.57□□□□□ -0.56
IRR1P40541 DED1YOR204W 1815 nt11.57□□□□□ -0.56
IRR1P40541 YHL050CYHL050C 2094 nt11.55□□□□□ -0.56
IRR1P40541 YIL100WYIL100W 354 nt11.54□□□□□ -0.56
IRR1P40541 SPP1YPL138C 1062 nt11.51□□□□□ -0.57
IRR1P40541 NME1NME1 340 nt11.46□□□□□ -0.57
IRR1P40541 PTK1YKL198C 1989 nt11.46□□□□□ -0.58
IRR1P40541 FMP52YER004W 696 nt11.45□□□□□ -0.58
IRR1P40541 FMT1YBL013W 1206 nt11.45□□□□□ -0.58
IRR1P40541 FRD1YEL047C 1413 nt11.44□□□□□ -0.58
IRR1P40541 SOR2YDL246C 1074 nt11.42□□□□□ -0.58
IRR1P40541 SOR1YJR159W 1074 nt11.42□□□□□ -0.58
IRR1P40541 RRT12YCR045C 1476 nt11.42□□□□□ -0.58
IRR1P40541 BOP3YNL042W 1191 nt11.41□□□□□ -0.58
IRR1P40541 UME6YDR207C 2511 nt11.4□□□□□ -0.58
IRR1P40541 RDN37-1RDN37-1 5354 nt11.4□□□□□ -0.58
IRR1P40541 RDN37-2RDN37-2 5354 nt11.4□□□□□ -0.58
IRR1P40541 MRPL8YJL063C 717 nt11.4□□□□□ -0.58
IRR1P40541 YNL195CYNL195C 786 nt11.39□□□□□ -0.59
IRR1P40541 YCL042WYCL042W 360 nt11.39□□□□□ -0.59
IRR1P40541 RTG1YOL067C 534 nt11.35□□□□□ -0.59
IRR1P40541 BOR1YNL275W 1731 nt11.32□□□□□ -0.6
IRR1P40541 CWP1YKL096W 720 nt11.31□□□□□ -0.6
IRR1P40541 YEL076C-AYEL076C-A 651 nt11.3□□□□□ -0.6
IRR1P40541 YEL076CYEL076C 651 nt11.3□□□□□ -0.6
IRR1P40541 YLR464WYLR464W 651 nt11.3□□□□□ -0.6
IRR1P40541 ADH2YMR303C 1047 nt11.29□□□□□ -0.6
IRR1P40541 PCM1YEL058W 1674 nt11.27□□□□□ -0.6
IRR1P40541 ADO1YJR105W 1023 nt11.27□□□□□ -0.61
IRR1P40541 RPM1RPM1 483 nt11.26□□□□□ -0.61
IRR1P40541 SNF6YHL025W 999 nt11.22□□□□□ -0.61
IRR1P40541 YLR235CYLR235C 399 nt11.22□□□□□ -0.61
IRR1P40541 PTH1YHR189W 573 nt11.21□□□□□ -0.61
IRR1P40541 NCP1YHR042W 2076 nt11.2□□□□□ -0.62
IRR1P40541 YKL030WYKL030W 606 nt11.16□□□□□ -0.62
IRR1P40541 YFL054CYFL054C 1941 nt11.15□□□□□ -0.62
IRR1P40541 YIH1YCR059C 777 nt11.14□□□□□ -0.63
IRR1P40541 HUA1YGR268C 597 nt11.13□□□□□ -0.63
IRR1P40541 RNQ1YCL028W 1218 nt11.13□□□□□ -0.63
IRR1P40541 SPT8YLR055C 1809 nt11.12□□□□□ -0.63
IRR1P40541 DIC1YLR348C 897 nt11.12□□□□□ -0.63
IRR1P40541 LCB1YMR296C 1677 nt11.1□□□□□ -0.63
IRR1P40541 TIM23YNR017W 669 nt11.06□□□□□ -0.64
IRR1P40541 BIO4YNR057C 714 nt11.06□□□□□ -0.64
IRR1P40541 SIM1YIL123W 1431 nt11.06□□□□□ -0.64
IRR1P40541 MCH5YOR306C 1566 nt11.03□□□□□ -0.64
IRR1P40541 YLL053CYLL053C 459 nt11.01□□□□□ -0.65
IRR1P40541 YLR179CYLR179C 606 nt10.99□□□□□ -0.65
Retrieved 100 of 7,029 protein–RNA pairs in 20 ms