Protein–RNA interactions for Protein: P40460

NDC80, Kinetochore protein NDC80, yeastyeast

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NDC80P40460 GIS3YLR094C 1509 nt13.24□□□□□ -0.29
NDC80P40460 ART5YGR068C 1761 nt13.22□□□□□ -0.29
NDC80P40460 GFD2YCL036W 1701 nt13.22□□□□□ -0.29
NDC80P40460 SHU1YHL006C 453 nt13.21□□□□□ -0.29
NDC80P40460 HOM6YJR139C 1080 nt13.21□□□□□ -0.29
NDC80P40460 SEC11YIR022W 504 nt13.17□□□□□ -0.3
NDC80P40460 PCH2YBR186W 1695 nt13.17□□□□□ -0.3
NDC80P40460 YAL037C-BYAL037C-B 975 nt13.16□□□□□ -0.3
NDC80P40460 PET9YBL030C 957 nt13.12□□□□□ -0.31
NDC80P40460 GUT2YIL155C 1950 nt13.11□□□□□ -0.31
NDC80P40460 RTS2YOR077W 699 nt13.11□□□□□ -0.31
NDC80P40460 MNP1YGL068W 585 nt13.05□□□□□ -0.32
NDC80P40460 YCH1YGR203W 447 nt13.04□□□□□ -0.32
NDC80P40460 YSC84YHR016C 1407 nt13.04□□□□□ -0.32
NDC80P40460 RKM5YLR137W 1104 nt13.02□□□□□ -0.33
NDC80P40460 TIR4YOR009W 1464 nt13□□□□□ -0.33
NDC80P40460 CUE1YMR264W 612 nt13□□□□□ -0.33
NDC80P40460 YHL050CYHL050C 2094 nt12.97□□□□□ -0.33
NDC80P40460 YMR057CYMR057C 372 nt12.93□□□□□ -0.34
NDC80P40460 PIB2YGL023C 1908 nt12.91□□□□□ -0.34
NDC80P40460 RRT12YCR045C 1476 nt12.9□□□□□ -0.34
NDC80P40460 YIL100WYIL100W 354 nt12.84□□□□□ -0.35
NDC80P40460 YKL097CYKL097C 411 nt12.84□□□□□ -0.35
NDC80P40460 YNL195CYNL195C 786 nt12.84□□□□□ -0.35
NDC80P40460 FPS1YLL043W 2010 nt12.84□□□□□ -0.35
NDC80P40460 NPL3YDR432W 1245 nt12.82□□□□□ -0.36
NDC80P40460 RTF1YGL244W 1677 nt12.82□□□□□ -0.36
NDC80P40460 YLR236CYLR236C 324 nt12.76□□□□□ -0.37
NDC80P40460 BOP3YNL042W 1191 nt12.74□□□□□ -0.37
NDC80P40460 YJL152WYJL152W 360 nt12.73□□□□□ -0.37
NDC80P40460 YLR154C-GYLR154C-G 150 nt12.73□□□□□ -0.37
NDC80P40460 YOL037CYOL037C 354 nt12.66□□□□□ -0.38
NDC80P40460 YCL048W-AYCL048W-A 240 nt12.66□□□□□ -0.38
NDC80P40460 PTK1YKL198C 1989 nt12.64□□□□□ -0.39
NDC80P40460 NCP1YHR042W 2076 nt12.59□□□□□ -0.39
NDC80P40460 WHI5YOR083W 888 nt12.45□□□□□ -0.42
NDC80P40460 LCB1YMR296C 1677 nt12.42□□□□□ -0.42
NDC80P40460 YOR139CYOR139C 393 nt12.42□□□□□ -0.42
NDC80P40460 YLR281CYLR281C 468 nt12.41□□□□□ -0.42
NDC80P40460 YJL225CYJL225C 5277 nt12.41□□□□□ -0.42
NDC80P40460 RRD1YIL153W 1182 nt12.39□□□□□ -0.43
NDC80P40460 YFL054CYFL054C 1941 nt12.38□□□□□ -0.43
NDC80P40460 IDH1YNL037C 1083 nt12.36□□□□□ -0.43
NDC80P40460 UME6YDR207C 2511 nt12.34□□□□□ -0.43
NDC80P40460 FMP52YER004W 696 nt12.33□□□□□ -0.44
NDC80P40460 GBP2YCL011C 1284 nt12.33□□□□□ -0.44
NDC80P40460 SPT8YLR055C 1809 nt12.3□□□□□ -0.44
NDC80P40460 DED1YOR204W 1815 nt12.29□□□□□ -0.44
NDC80P40460 TCD2YKL027W 1344 nt12.27□□□□□ -0.45
NDC80P40460 PCM1YEL058W 1674 nt12.26□□□□□ -0.45
NDC80P40460 SIM1YIL123W 1431 nt12.25□□□□□ -0.45
NDC80P40460 FMT1YBL013W 1206 nt12.21□□□□□ -0.45
NDC80P40460 IMP2'YIL154C 1041 nt12.19□□□□□ -0.46
NDC80P40460 LYS4YDR234W 2082 nt12.18□□□□□ -0.46
NDC80P40460 BOR1YNL275W 1731 nt12.15□□□□□ -0.46
NDC80P40460 ADH2YMR303C 1047 nt12.15□□□□□ -0.46
NDC80P40460 CWP1YKL096W 720 nt12.14□□□□□ -0.47
NDC80P40460 DSK2YMR276W 1122 nt12.13□□□□□ -0.47
NDC80P40460 SNF6YHL025W 999 nt12.12□□□□□ -0.47
NDC80P40460 BIO4YNR057C 714 nt12.12□□□□□ -0.47
NDC80P40460 PUS2YGL063W 1113 nt12.11□□□□□ -0.47
NDC80P40460 YDR433WYDR433W 441 nt12.09□□□□□ -0.47
NDC80P40460 SWE1YJL187C 2460 nt12.08□□□□□ -0.48
NDC80P40460 MXR2YCL033C 507 nt12.05□□□□□ -0.48
NDC80P40460 FMP45YDL222C 930 nt12.04□□□□□ -0.48
NDC80P40460 SOR2YDL246C 1074 nt12.04□□□□□ -0.48
NDC80P40460 SOR1YJR159W 1074 nt12.04□□□□□ -0.48
NDC80P40460 YPR011CYPR011C 981 nt12.02□□□□□ -0.49
NDC80P40460 YCL042WYCL042W 360 nt12□□□□□ -0.49
NDC80P40460 tM(CAU)CtM(CAU)C 72 nt11.99□□□□□ -0.49
NDC80P40460 IMT4tM(CAU)E 72 nt11.99□□□□□ -0.49
NDC80P40460 IMT3tM(CAU)J3 72 nt11.99□□□□□ -0.49
NDC80P40460 IMT1tM(CAU)O1 72 nt11.99□□□□□ -0.49
NDC80P40460 IMT2tM(CAU)P 72 nt11.99□□□□□ -0.49
NDC80P40460 ERF2YLR246W 1080 nt11.99□□□□□ -0.49
NDC80P40460 YIH1YCR059C 777 nt11.96□□□□□ -0.49
NDC80P40460 CRR1YLR213C 1269 nt11.96□□□□□ -0.49
NDC80P40460 ERV46YAL042W 1248 nt11.94□□□□□ -0.5
NDC80P40460 YKR040CYKR040C 504 nt11.92□□□□□ -0.5
NDC80P40460 YLL053CYLL053C 459 nt11.92□□□□□ -0.5
NDC80P40460 LPX1YOR084W 1164 nt11.91□□□□□ -0.5
NDC80P40460 RNQ1YCL028W 1218 nt11.91□□□□□ -0.5
NDC80P40460 FRD1YEL047C 1413 nt11.9□□□□□ -0.5
NDC80P40460 RDN37-1RDN37-1 5354 nt11.9□□□□□ -0.51
NDC80P40460 RDN37-2RDN37-2 5354 nt11.9□□□□□ -0.51
NDC80P40460 MCH5YOR306C 1566 nt11.88□□□□□ -0.51
NDC80P40460 YHR056W-AYHR056W-A 435 nt11.88□□□□□ -0.51
NDC80P40460 HSP60YLR259C 1719 nt11.88□□□□□ -0.51
NDC80P40460 HEM12YDR047W 1089 nt11.85□□□□□ -0.51
NDC80P40460 ATF2YGR177C 1608 nt11.85□□□□□ -0.51
NDC80P40460 MIC10YCL057C-A 294 nt11.83□□□□□ -0.52
NDC80P40460 FTR1YER145C 1215 nt11.8□□□□□ -0.52
NDC80P40460 YFL067WYFL067W 528 nt11.8□□□□□ -0.52
NDC80P40460 SNG1YGR197C 1644 nt11.79□□□□□ -0.52
NDC80P40460 GLK1YCL040W 1503 nt11.79□□□□□ -0.52
NDC80P40460 RAX1YOR301W 1308 nt11.78□□□□□ -0.52
NDC80P40460 GAL1YBR020W 1587 nt11.75□□□□□ -0.53
NDC80P40460 DIC1YLR348C 897 nt11.75□□□□□ -0.53
NDC80P40460 TRM5YHR070W 1500 nt11.75□□□□□ -0.53
NDC80P40460 CCA1YER168C 1641 nt11.75□□□□□ -0.53
Retrieved 100 of 7,029 protein–RNA pairs in 28.4 ms