Protein–RNA interactions for Protein: P38907

CHL4, Inner kinetochore subunit CHL4, yeastyeast

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CHL4P38907 SDH1YKL148C 1923 nt11.25□□□□□ -0.61
CHL4P38907 RKM5YLR137W 1104 nt11.23□□□□□ -0.61
CHL4P38907 ART5YGR068C 1761 nt11.19□□□□□ -0.62
CHL4P38907 IRC15YPL017C 1500 nt11.19□□□□□ -0.62
CHL4P38907 GFD2YCL036W 1701 nt11.17□□□□□ -0.62
CHL4P38907 SCC4YER147C 1875 nt11.15□□□□□ -0.63
CHL4P38907 PET9YBL030C 957 nt11.12□□□□□ -0.63
CHL4P38907 GIS3YLR094C 1509 nt11.12□□□□□ -0.63
CHL4P38907 YCH1YGR203W 447 nt11.07□□□□□ -0.64
CHL4P38907 RTS2YOR077W 699 nt11.07□□□□□ -0.64
CHL4P38907 TIR4YOR009W 1464 nt11.06□□□□□ -0.64
CHL4P38907 YOL037CYOL037C 354 nt11□□□□□ -0.65
CHL4P38907 NPL3YDR432W 1245 nt10.98□□□□□ -0.65
CHL4P38907 YMR057CYMR057C 372 nt10.98□□□□□ -0.65
CHL4P38907 CUE1YMR264W 612 nt10.98□□□□□ -0.65
CHL4P38907 SEC11YIR022W 504 nt10.97□□□□□ -0.65
CHL4P38907 YLR154C-GYLR154C-G 150 nt10.94□□□□□ -0.66
CHL4P38907 PCH2YBR186W 1695 nt10.93□□□□□ -0.66
CHL4P38907 YJL152WYJL152W 360 nt10.92□□□□□ -0.66
CHL4P38907 YSC84YHR016C 1407 nt10.9□□□□□ -0.66
CHL4P38907 YOR139CYOR139C 393 nt10.89□□□□□ -0.67
CHL4P38907 GUT2YIL155C 1950 nt10.88□□□□□ -0.67
CHL4P38907 FPS1YLL043W 2010 nt10.87□□□□□ -0.67
CHL4P38907 PAC11YDR488C 1602 nt10.87□□□□□ -0.67
CHL4P38907 YIL100WYIL100W 354 nt10.86□□□□□ -0.67
CHL4P38907 YHL050CYHL050C 2094 nt10.84□□□□□ -0.67
CHL4P38907 YLR236CYLR236C 324 nt10.82□□□□□ -0.68
CHL4P38907 YNL195CYNL195C 786 nt10.82□□□□□ -0.68
CHL4P38907 RRT12YCR045C 1476 nt10.81□□□□□ -0.68
CHL4P38907 YCL048W-AYCL048W-A 240 nt10.8□□□□□ -0.68
CHL4P38907 YJL225CYJL225C 5277 nt10.79□□□□□ -0.68
CHL4P38907 WHI5YOR083W 888 nt10.78□□□□□ -0.68
CHL4P38907 YLR281CYLR281C 468 nt10.76□□□□□ -0.69
CHL4P38907 PIB2YGL023C 1908 nt10.7□□□□□ -0.7
CHL4P38907 RTF1YGL244W 1677 nt10.66□□□□□ -0.7
CHL4P38907 NVJ2YPR091C 2313 nt10.66□□□□□ -0.7
CHL4P38907 IDH1YNL037C 1083 nt10.64□□□□□ -0.71
CHL4P38907 BOP3YNL042W 1191 nt10.62□□□□□ -0.71
CHL4P38907 GBP2YCL011C 1284 nt10.59□□□□□ -0.71
CHL4P38907 PUS2YGL063W 1113 nt10.56□□□□□ -0.72
CHL4P38907 RRD1YIL153W 1182 nt10.56□□□□□ -0.72
CHL4P38907 IMP2'YIL154C 1041 nt10.55□□□□□ -0.72
CHL4P38907 DSK2YMR276W 1122 nt10.52□□□□□ -0.73
CHL4P38907 NCP1YHR042W 2076 nt10.52□□□□□ -0.73
CHL4P38907 TCD2YKL027W 1344 nt10.51□□□□□ -0.73
CHL4P38907 PTK1YKL198C 1989 nt10.5□□□□□ -0.73
CHL4P38907 tM(CAU)CtM(CAU)C 72 nt10.5□□□□□ -0.73
CHL4P38907 IMT4tM(CAU)E 72 nt10.5□□□□□ -0.73
CHL4P38907 IMT3tM(CAU)J3 72 nt10.5□□□□□ -0.73
CHL4P38907 IMT1tM(CAU)O1 72 nt10.5□□□□□ -0.73
CHL4P38907 IMT2tM(CAU)P 72 nt10.5□□□□□ -0.73
CHL4P38907 DED1YOR204W 1815 nt10.49□□□□□ -0.73
CHL4P38907 FMP52YER004W 696 nt10.49□□□□□ -0.73
CHL4P38907 RDN37-1RDN37-1 5354 nt10.45□□□□□ -0.74
CHL4P38907 RDN37-2RDN37-2 5354 nt10.45□□□□□ -0.74
CHL4P38907 LCB1YMR296C 1677 nt10.44□□□□□ -0.74
CHL4P38907 YDR433WYDR433W 441 nt10.43□□□□□ -0.74
CHL4P38907 YPR011CYPR011C 981 nt10.43□□□□□ -0.74
CHL4P38907 FMT1YBL013W 1206 nt10.42□□□□□ -0.74
CHL4P38907 PCM1YEL058W 1674 nt10.41□□□□□ -0.74
CHL4P38907 FMP45YDL222C 930 nt10.39□□□□□ -0.75
CHL4P38907 MXR2YCL033C 507 nt10.38□□□□□ -0.75
CHL4P38907 SIM1YIL123W 1431 nt10.36□□□□□ -0.75
CHL4P38907 CWP1YKL096W 720 nt10.36□□□□□ -0.75
CHL4P38907 ADH2YMR303C 1047 nt10.35□□□□□ -0.75
CHL4P38907 ERV46YAL042W 1248 nt10.34□□□□□ -0.75
CHL4P38907 SNF6YHL025W 999 nt10.33□□□□□ -0.76
CHL4P38907 YFL054CYFL054C 1941 nt10.31□□□□□ -0.76
CHL4P38907 SOR2YDL246C 1074 nt10.31□□□□□ -0.76
CHL4P38907 SOR1YJR159W 1074 nt10.31□□□□□ -0.76
CHL4P38907 LPX1YOR084W 1164 nt10.31□□□□□ -0.76
CHL4P38907 YKR040CYKR040C 504 nt10.3□□□□□ -0.76
CHL4P38907 YCL042WYCL042W 360 nt10.29□□□□□ -0.76
CHL4P38907 BIO4YNR057C 714 nt10.27□□□□□ -0.77
CHL4P38907 LYS4YDR234W 2082 nt10.23□□□□□ -0.77
CHL4P38907 SPT8YLR055C 1809 nt10.23□□□□□ -0.77
CHL4P38907 FRD1YEL047C 1413 nt10.23□□□□□ -0.77
CHL4P38907 YIH1YCR059C 777 nt10.19□□□□□ -0.78
CHL4P38907 ERF2YLR246W 1080 nt10.15□□□□□ -0.78
CHL4P38907 RNQ1YCL028W 1218 nt10.15□□□□□ -0.78
CHL4P38907 YLL053CYLL053C 459 nt10.14□□□□□ -0.79
CHL4P38907 Q0182Q0182 405 nt10.11□□□□□ -0.79
CHL4P38907 CRR1YLR213C 1269 nt10.11□□□□□ -0.79
CHL4P38907 DIC1YLR348C 897 nt10.07□□□□□ -0.8
CHL4P38907 SWE1YJL187C 2460 nt10.07□□□□□ -0.8
CHL4P38907 ATF2YGR177C 1608 nt10.04□□□□□ -0.8
CHL4P38907 FTR1YER145C 1215 nt10.04□□□□□ -0.8
CHL4P38907 YFL067WYFL067W 528 nt10.03□□□□□ -0.8
CHL4P38907 BOR1YNL275W 1731 nt10.03□□□□□ -0.8
CHL4P38907 HEM12YDR047W 1089 nt10.02□□□□□ -0.81
CHL4P38907 YHR056W-AYHR056W-A 435 nt10.01□□□□□ -0.81
CHL4P38907 GAL1YBR020W 1587 nt10.01□□□□□ -0.81
CHL4P38907 SPP1YPL138C 1062 nt10□□□□□ -0.81
CHL4P38907 MIC10YCL057C-A 294 nt10□□□□□ -0.81
CHL4P38907 TRM5YHR070W 1500 nt10□□□□□ -0.81
CHL4P38907 SNG1YGR197C 1644 nt9.99□□□□□ -0.81
CHL4P38907 PTH1YHR189W 573 nt9.98□□□□□ -0.81
CHL4P38907 DDR2YOL052C-A 186 nt9.97□□□□□ -0.81
CHL4P38907 YLR235CYLR235C 399 nt9.95□□□□□ -0.82
CHL4P38907 MOT3YMR070W 1473 nt9.95□□□□□ -0.82
Retrieved 100 of 7,029 protein–RNA pairs in 9.6 ms