Protein–RNA interactions for Protein: P36094

SPC42, Spindle pole body component SPC42, yeastyeast

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPC42P36094 GUT2YIL155C 1950 nt11.99□□□□□ -0.49
SPC42P36094 SEC11YIR022W 504 nt11.99□□□□□ -0.49
SPC42P36094 FUN26YAL022C 1554 nt11.98□□□□□ -0.49
SPC42P36094 MNP1YGL068W 585 nt11.98□□□□□ -0.49
SPC42P36094 BDH2YAL061W 1254 nt11.97□□□□□ -0.49
SPC42P36094 SCC4YER147C 1875 nt11.95□□□□□ -0.5
SPC42P36094 ALF1YNL148C 765 nt11.91□□□□□ -0.5
SPC42P36094 IRC15YPL017C 1500 nt11.91□□□□□ -0.5
SPC42P36094 NPL3YDR432W 1245 nt11.88□□□□□ -0.51
SPC42P36094 YFL021C-AYFL021C-A 855 nt11.87□□□□□ -0.51
SPC42P36094 TRM9YML014W 840 nt11.84□□□□□ -0.51
SPC42P36094 SIS1YNL007C 1059 nt11.84□□□□□ -0.51
SPC42P36094 PIB2YGL023C 1908 nt11.84□□□□□ -0.51
SPC42P36094 GIS3YLR094C 1509 nt11.82□□□□□ -0.52
SPC42P36094 RKM5YLR137W 1104 nt11.82□□□□□ -0.52
SPC42P36094 CCT6YDR188W 1641 nt11.78□□□□□ -0.52
SPC42P36094 LSM3YLR438C-A 270 nt11.78□□□□□ -0.52
SPC42P36094 YOL037CYOL037C 354 nt11.77□□□□□ -0.53
SPC42P36094 YSC84YHR016C 1407 nt11.72□□□□□ -0.53
SPC42P36094 SUF2tP(AGG)C 72 nt11.7□□□□□ -0.54
SPC42P36094 SUF10tP(AGG)N 72 nt11.7□□□□□ -0.54
SPC42P36094 RDN37-1RDN37-1 5354 nt11.7□□□□□ -0.54
SPC42P36094 RDN37-2RDN37-2 5354 nt11.7□□□□□ -0.54
SPC42P36094 YHL050CYHL050C 2094 nt11.69□□□□□ -0.54
SPC42P36094 GFD2YCL036W 1701 nt11.69□□□□□ -0.54
SPC42P36094 ART5YGR068C 1761 nt11.66□□□□□ -0.54
SPC42P36094 BSP1YPR171W 1731 nt11.66□□□□□ -0.54
SPC42P36094 RTF1YGL244W 1677 nt11.65□□□□□ -0.54
SPC42P36094 PET9YBL030C 957 nt11.6□□□□□ -0.55
SPC42P36094 RRT12YCR045C 1476 nt11.56□□□□□ -0.56
SPC42P36094 tM(CAU)CtM(CAU)C 72 nt11.55□□□□□ -0.56
SPC42P36094 IMT4tM(CAU)E 72 nt11.55□□□□□ -0.56
SPC42P36094 IMT3tM(CAU)J3 72 nt11.55□□□□□ -0.56
SPC42P36094 IMT1tM(CAU)O1 72 nt11.55□□□□□ -0.56
SPC42P36094 IMT2tM(CAU)P 72 nt11.55□□□□□ -0.56
SPC42P36094 BOP3YNL042W 1191 nt11.55□□□□□ -0.56
SPC42P36094 RTS2YOR077W 699 nt11.55□□□□□ -0.56
SPC42P36094 CUE1YMR264W 612 nt11.54□□□□□ -0.56
SPC42P36094 PTK1YKL198C 1989 nt11.53□□□□□ -0.56
SPC42P36094 SSN3YPL042C 1668 nt11.52□□□□□ -0.56
SPC42P36094 YLR281CYLR281C 468 nt11.51□□□□□ -0.57
SPC42P36094 YCH1YGR203W 447 nt11.48□□□□□ -0.57
SPC42P36094 WHI5YOR083W 888 nt11.46□□□□□ -0.57
SPC42P36094 YNL195CYNL195C 786 nt11.44□□□□□ -0.58
SPC42P36094 PUS2YGL063W 1113 nt11.43□□□□□ -0.58
SPC42P36094 NME1NME1 340 nt11.41□□□□□ -0.58
SPC42P36094 NCP1YHR042W 2076 nt11.39□□□□□ -0.59
SPC42P36094 YLR154C-GYLR154C-G 150 nt11.37□□□□□ -0.59
SPC42P36094 TIR4YOR009W 1464 nt11.37□□□□□ -0.59
SPC42P36094 YDR510C-AYDR510C-A 117 nt11.36□□□□□ -0.59
SPC42P36094 YIL100WYIL100W 354 nt11.35□□□□□ -0.59
SPC42P36094 YMR057CYMR057C 372 nt11.31□□□□□ -0.6
SPC42P36094 Q0010Q0010 387 nt11.31□□□□□ -0.6
SPC42P36094 YLR236CYLR236C 324 nt11.25□□□□□ -0.61
SPC42P36094 YPR011CYPR011C 981 nt11.24□□□□□ -0.61
SPC42P36094 YJL152WYJL152W 360 nt11.23□□□□□ -0.61
SPC42P36094 DSK2YMR276W 1122 nt11.23□□□□□ -0.61
SPC42P36094 YFL054CYFL054C 1941 nt11.21□□□□□ -0.62
SPC42P36094 SPT8YLR055C 1809 nt11.2□□□□□ -0.62
SPC42P36094 BOR1YNL275W 1731 nt11.19□□□□□ -0.62
SPC42P36094 IMP2'YIL154C 1041 nt11.17□□□□□ -0.62
SPC42P36094 UBX6YJL048C 1191 nt11.17□□□□□ -0.62
SPC42P36094 FMP45YDL222C 930 nt11.15□□□□□ -0.62
SPC42P36094 MCM5YLR274W 2328 nt11.15□□□□□ -0.62
SPC42P36094 UME6YDR207C 2511 nt11.12□□□□□ -0.63
SPC42P36094 MAS1YLR163C 1389 nt11.12□□□□□ -0.63
SPC42P36094 LCB1YMR296C 1677 nt11.08□□□□□ -0.64
SPC42P36094 IDH1YNL037C 1083 nt11.08□□□□□ -0.64
SPC42P36094 YJR154WYJR154W 1041 nt11.04□□□□□ -0.64
SPC42P36094 LPX1YOR084W 1164 nt11.02□□□□□ -0.65
SPC42P36094 YCL048W-AYCL048W-A 240 nt11□□□□□ -0.65
SPC42P36094 ERV46YAL042W 1248 nt10.99□□□□□ -0.65
SPC42P36094 GBP2YCL011C 1284 nt10.97□□□□□ -0.65
SPC42P36094 YDR433WYDR433W 441 nt10.96□□□□□ -0.65
SPC42P36094 SWE1YJL187C 2460 nt10.96□□□□□ -0.66
SPC42P36094 RSC4YKR008W 1878 nt10.95□□□□□ -0.66
SPC42P36094 HSP60YLR259C 1719 nt10.92□□□□□ -0.66
SPC42P36094 LYS4YDR234W 2082 nt10.91□□□□□ -0.66
SPC42P36094 MXR2YCL033C 507 nt10.89□□□□□ -0.67
SPC42P36094 YKR040CYKR040C 504 nt10.88□□□□□ -0.67
SPC42P36094 SPP1YPL138C 1062 nt10.86□□□□□ -0.67
SPC42P36094 ALG12YNR030W 1656 nt10.85□□□□□ -0.67
SPC42P36094 ESBP6YNL125C 2022 nt10.85□□□□□ -0.67
SPC42P36094 GID7YCL039W 2238 nt10.85□□□□□ -0.67
SPC42P36094 YDR306CYDR306C 1437 nt10.84□□□□□ -0.67
SPC42P36094 TCD2YKL027W 1344 nt10.83□□□□□ -0.68
SPC42P36094 MRPL8YJL063C 717 nt10.82□□□□□ -0.68
SPC42P36094 DED1YOR204W 1815 nt10.81□□□□□ -0.68
SPC42P36094 FMP52YER004W 696 nt10.81□□□□□ -0.68
SPC42P36094 RRD1YIL153W 1182 nt10.81□□□□□ -0.68
SPC42P36094 SIM1YIL123W 1431 nt10.8□□□□□ -0.68
SPC42P36094 PUS7YOR243C 2031 nt10.78□□□□□ -0.68
SPC42P36094 GLK1YCL040W 1503 nt10.78□□□□□ -0.68
SPC42P36094 PCM1YEL058W 1674 nt10.77□□□□□ -0.69
SPC42P36094 MCH5YOR306C 1566 nt10.77□□□□□ -0.69
SPC42P36094 HEM14YER014W 1620 nt10.76□□□□□ -0.69
SPC42P36094 CLB6YGR109C 1143 nt10.73□□□□□ -0.69
SPC42P36094 MET8YBR213W 825 nt10.72□□□□□ -0.69
SPC42P36094 BIO4YNR057C 714 nt10.71□□□□□ -0.69
SPC42P36094 FRD1YEL047C 1413 nt10.7□□□□□ -0.7
Retrieved 100 of 7,029 protein–RNA pairs in 12.6 ms