Protein–RNA interactions for Protein: P32588

PUB1, Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1, yeastyeast

Known RBP RIP-Chip data

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUB1P32588 HOM6YJR139C 1080 nt11.12□□□□□ -0.63
PUB1P32588 IRC15YPL017C 1500 nt11.12□□□□□ -0.63
PUB1P32588 SCC4YER147C 1875 nt11.12□□□□□ -0.63
PUB1P32588 Q0182Q0182 405 nt11.09□□□□□ -0.63
PUB1P32588 ART5YGR068C 1761 nt11.08□□□□□ -0.64 RIP-Chip
PUB1P32588 GFD2YCL036W 1701 nt11.07□□□□□ -0.64
PUB1P32588 GIS3YLR094C 1509 nt11.05□□□□□ -0.64
PUB1P32588 YOR139CYOR139C 393 nt11.04□□□□□ -0.64
PUB1P32588 MNP1YGL068W 585 nt11.02□□□□□ -0.65
PUB1P32588 MOT3YMR070W 1473 nt11.01□□□□□ -0.65
PUB1P32588 RTS2YOR077W 699 nt11□□□□□ -0.65
PUB1P32588 SEC11YIR022W 504 nt10.99□□□□□ -0.65
PUB1P32588 PET9YBL030C 957 nt10.99□□□□□ -0.65 RIP-Chip
PUB1P32588 RKM5YLR137W 1104 nt10.97□□□□□ -0.65
PUB1P32588 PCH2YBR186W 1695 nt10.97□□□□□ -0.65
PUB1P32588 YCH1YGR203W 447 nt10.94□□□□□ -0.66 RIP-Chip
PUB1P32588 TIR4YOR009W 1464 nt10.92□□□□□ -0.66
PUB1P32588 GUT2YIL155C 1950 nt10.91□□□□□ -0.66
PUB1P32588 CUE1YMR264W 612 nt10.89□□□□□ -0.67
PUB1P32588 YSC84YHR016C 1407 nt10.89□□□□□ -0.67
PUB1P32588 NPL3YDR432W 1245 nt10.86□□□□□ -0.67
PUB1P32588 YMR057CYMR057C 372 nt10.84□□□□□ -0.67
PUB1P32588 YHL050CYHL050C 2094 nt10.81□□□□□ -0.68
PUB1P32588 YIL100WYIL100W 354 nt10.79□□□□□ -0.68
PUB1P32588 YNL195CYNL195C 786 nt10.78□□□□□ -0.68
PUB1P32588 RRT12YCR045C 1476 nt10.76□□□□□ -0.69
PUB1P32588 PAC11YDR488C 1602 nt10.76□□□□□ -0.69
PUB1P32588 FPS1YLL043W 2010 nt10.74□□□□□ -0.69
PUB1P32588 YJL152WYJL152W 360 nt10.73□□□□□ -0.69
PUB1P32588 YLR154C-GYLR154C-G 150 nt10.72□□□□□ -0.69
PUB1P32588 PIB2YGL023C 1908 nt10.72□□□□□ -0.69
PUB1P32588 YLR236CYLR236C 324 nt10.71□□□□□ -0.69
PUB1P32588 YOL037CYOL037C 354 nt10.71□□□□□ -0.69
PUB1P32588 RTF1YGL244W 1677 nt10.69□□□□□ -0.7
PUB1P32588 YCL048W-AYCL048W-A 240 nt10.67□□□□□ -0.7
PUB1P32588 BOP3YNL042W 1191 nt10.63□□□□□ -0.71
PUB1P32588 tM(CAU)CtM(CAU)C 72 nt10.58□□□□□ -0.72
PUB1P32588 IMT4tM(CAU)E 72 nt10.58□□□□□ -0.72
PUB1P32588 IMT3tM(CAU)J3 72 nt10.58□□□□□ -0.72
PUB1P32588 IMT1tM(CAU)O1 72 nt10.58□□□□□ -0.72
PUB1P32588 IMT2tM(CAU)P 72 nt10.58□□□□□ -0.72
PUB1P32588 NME1NME1 340 nt10.52□□□□□ -0.73
PUB1P32588 PTK1YKL198C 1989 nt10.51□□□□□ -0.73 RIP-Chip
PUB1P32588 WHI5YOR083W 888 nt10.49□□□□□ -0.73
PUB1P32588 NCP1YHR042W 2076 nt10.48□□□□□ -0.73
PUB1P32588 YLR281CYLR281C 468 nt10.47□□□□□ -0.73
PUB1P32588 YJL225CYJL225C 5277 nt10.45□□□□□ -0.74
PUB1P32588 PUS2YGL063W 1113 nt10.44□□□□□ -0.74
PUB1P32588 IDH1YNL037C 1083 nt10.43□□□□□ -0.74
PUB1P32588 GBP2YCL011C 1284 nt10.39□□□□□ -0.75
PUB1P32588 LCB1YMR296C 1677 nt10.38□□□□□ -0.75
PUB1P32588 RRD1YIL153W 1182 nt10.38□□□□□ -0.75
PUB1P32588 FMP52YER004W 696 nt10.35□□□□□ -0.75 RIP-Chip
PUB1P32588 TCD2YKL027W 1344 nt10.33□□□□□ -0.76
PUB1P32588 YFL054CYFL054C 1941 nt10.33□□□□□ -0.76
PUB1P32588 DED1YOR204W 1815 nt10.3□□□□□ -0.76 RIP-Chip
PUB1P32588 IMP2'YIL154C 1041 nt10.29□□□□□ -0.76
PUB1P32588 PCM1YEL058W 1674 nt10.28□□□□□ -0.76
PUB1P32588 SIM1YIL123W 1431 nt10.27□□□□□ -0.77 RIP-Chip
PUB1P32588 NVJ2YPR091C 2313 nt10.27□□□□□ -0.77
PUB1P32588 SPT8YLR055C 1809 nt10.26□□□□□ -0.77
PUB1P32588 DSK2YMR276W 1122 nt10.25□□□□□ -0.77
PUB1P32588 YPR011CYPR011C 981 nt10.25□□□□□ -0.77
PUB1P32588 FMT1YBL013W 1206 nt10.22□□□□□ -0.77
PUB1P32588 YDR433WYDR433W 441 nt10.2□□□□□ -0.78
PUB1P32588 CWP1YKL096W 720 nt10.2□□□□□ -0.78 RIP-Chip
PUB1P32588 SNF6YHL025W 999 nt10.19□□□□□ -0.78
PUB1P32588 ADH2YMR303C 1047 nt10.19□□□□□ -0.78
PUB1P32588 FMP45YDL222C 930 nt10.18□□□□□ -0.78
PUB1P32588 BIO4YNR057C 714 nt10.17□□□□□ -0.78
PUB1P32588 LYS4YDR234W 2082 nt10.16□□□□□ -0.78 RIP-Chip
PUB1P32588 RDN37-1RDN37-1 5354 nt10.16□□□□□ -0.78
PUB1P32588 RDN37-2RDN37-2 5354 nt10.16□□□□□ -0.78
PUB1P32588 MXR2YCL033C 507 nt10.14□□□□□ -0.79
PUB1P32588 SOR2YDL246C 1074 nt10.13□□□□□ -0.79
PUB1P32588 SOR1YJR159W 1074 nt10.13□□□□□ -0.79
PUB1P32588 YCL042WYCL042W 360 nt10.12□□□□□ -0.79
PUB1P32588 CSM2YIL132C 642 nt10.11□□□□□ -0.79
PUB1P32588 SWE1YJL187C 2460 nt10.08□□□□□ -0.8 RIP-Chip
PUB1P32588 ERV46YAL042W 1248 nt10.07□□□□□ -0.8
PUB1P32588 ERF2YLR246W 1080 nt10.06□□□□□ -0.8
PUB1P32588 BOR1YNL275W 1731 nt10.04□□□□□ -0.8 RIP-Chip
PUB1P32588 YIH1YCR059C 777 nt10.04□□□□□ -0.8
PUB1P32588 LPX1YOR084W 1164 nt10.04□□□□□ -0.8 RIP-Chip
PUB1P32588 YKR040CYKR040C 504 nt10.03□□□□□ -0.8
PUB1P32588 CRR1YLR213C 1269 nt10.02□□□□□ -0.81
PUB1P32588 FRD1YEL047C 1413 nt10□□□□□ -0.81
PUB1P32588 RNQ1YCL028W 1218 nt10□□□□□ -0.81 RIP-Chip
PUB1P32588 YLL053CYLL053C 459 nt9.99□□□□□ -0.81
PUB1P32588 YHR056W-AYHR056W-A 435 nt9.95□□□□□ -0.82
PUB1P32588 HEM12YDR047W 1089 nt9.94□□□□□ -0.82
PUB1P32588 SPP1YPL138C 1062 nt9.94□□□□□ -0.82
PUB1P32588 ATF2YGR177C 1608 nt9.93□□□□□ -0.82 RIP-Chip
PUB1P32588 YFL067WYFL067W 528 nt9.91□□□□□ -0.82
PUB1P32588 FTR1YER145C 1215 nt9.9□□□□□ -0.82 RIP-Chip
PUB1P32588 DIC1YLR348C 897 nt9.9□□□□□ -0.82
PUB1P32588 MIC10YCL057C-A 294 nt9.9□□□□□ -0.82
PUB1P32588 HSP60YLR259C 1719 nt9.89□□□□□ -0.83
PUB1P32588 PAU21YOR394W 495 nt9.88□□□□□ -0.83
PUB1P32588 PAU22YPL282C 495 nt9.88□□□□□ -0.83
Retrieved 100 of 7,029 protein–RNA pairs in 16.2 ms