Protein–RNA interactions for Protein: P32561

RPD3, Histone deacetylase RPD3, yeastyeast

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPD3P32561 TRM9YML014W 840 nt10.53□□□□□ -0.72
RPD3P32561 SIS1YNL007C 1059 nt10.49□□□□□ -0.73
RPD3P32561 SHU1YHL006C 453 nt10.48□□□□□ -0.73
RPD3P32561 PIB2YGL023C 1908 nt10.48□□□□□ -0.73
RPD3P32561 YSC84YHR016C 1407 nt10.48□□□□□ -0.73
RPD3P32561 CCT6YDR188W 1641 nt10.44□□□□□ -0.74
RPD3P32561 UME6YDR207C 2511 nt10.41□□□□□ -0.74
RPD3P32561 SUF2tP(AGG)C 72 nt10.4□□□□□ -0.74
RPD3P32561 SUF10tP(AGG)N 72 nt10.4□□□□□ -0.74
RPD3P32561 YHL050CYHL050C 2094 nt10.4□□□□□ -0.75
RPD3P32561 GFD2YCL036W 1701 nt10.39□□□□□ -0.75
RPD3P32561 RTF1YGL244W 1677 nt10.39□□□□□ -0.75
RPD3P32561 ART5YGR068C 1761 nt10.38□□□□□ -0.75
RPD3P32561 LSM3YLR438C-A 270 nt10.36□□□□□ -0.75
RPD3P32561 RTS2YOR077W 699 nt10.36□□□□□ -0.75
RPD3P32561 WWM1YFL010C 636 nt10.33□□□□□ -0.76
RPD3P32561 RRT12YCR045C 1476 nt10.31□□□□□ -0.76
RPD3P32561 YGR021WYGR021W 873 nt10.29□□□□□ -0.76
RPD3P32561 PET9YBL030C 957 nt10.29□□□□□ -0.76
RPD3P32561 BOP3YNL042W 1191 nt10.29□□□□□ -0.76
RPD3P32561 YAL037C-BYAL037C-B 975 nt10.27□□□□□ -0.77
RPD3P32561 CUE1YMR264W 612 nt10.26□□□□□ -0.77
RPD3P32561 PTK1YKL198C 1989 nt10.25□□□□□ -0.77
RPD3P32561 YNL195CYNL195C 786 nt10.24□□□□□ -0.77
RPD3P32561 YOR139CYOR139C 393 nt10.23□□□□□ -0.77
RPD3P32561 YFL021C-AYFL021C-A 855 nt10.21□□□□□ -0.77
RPD3P32561 HOM6YJR139C 1080 nt10.2□□□□□ -0.78
RPD3P32561 YCH1YGR203W 447 nt10.17□□□□□ -0.78
RPD3P32561 YIL100WYIL100W 354 nt10.15□□□□□ -0.78
RPD3P32561 NPL3YDR432W 1245 nt10.14□□□□□ -0.79
RPD3P32561 TIR4YOR009W 1464 nt10.1□□□□□ -0.79
RPD3P32561 MNP1YGL068W 585 nt10.1□□□□□ -0.79
RPD3P32561 YMR057CYMR057C 372 nt10.09□□□□□ -0.79
RPD3P32561 NCP1YHR042W 2076 nt10.07□□□□□ -0.8
RPD3P32561 RKM5YLR137W 1104 nt10.06□□□□□ -0.8
RPD3P32561 BOR1YNL275W 1731 nt10.04□□□□□ -0.8
RPD3P32561 YFL054CYFL054C 1941 nt10.03□□□□□ -0.8
RPD3P32561 YGR139WYGR139W 339 nt10.03□□□□□ -0.8
RPD3P32561 YLR236CYLR236C 324 nt10.02□□□□□ -0.81
RPD3P32561 YOL037CYOL037C 354 nt9.99□□□□□ -0.81
RPD3P32561 RPM1RPM1 483 nt9.97□□□□□ -0.81
RPD3P32561 SPT8YLR055C 1809 nt9.97□□□□□ -0.81
RPD3P32561 YJL225CYJL225C 5277 nt9.9□□□□□ -0.82
RPD3P32561 LCB1YMR296C 1677 nt9.86□□□□□ -0.83
RPD3P32561 tM(CAU)CtM(CAU)C 72 nt9.84□□□□□ -0.83
RPD3P32561 IMT4tM(CAU)E 72 nt9.84□□□□□ -0.83
RPD3P32561 IMT3tM(CAU)J3 72 nt9.84□□□□□ -0.83
RPD3P32561 IMT1tM(CAU)O1 72 nt9.84□□□□□ -0.83
RPD3P32561 IMT2tM(CAU)P 72 nt9.84□□□□□ -0.83
RPD3P32561 YCL048W-AYCL048W-A 240 nt9.82□□□□□ -0.84
RPD3P32561 YJL152WYJL152W 360 nt9.8□□□□□ -0.84
RPD3P32561 MCH5YOR306C 1566 nt9.8□□□□□ -0.84
RPD3P32561 SWE1YJL187C 2460 nt9.76□□□□□ -0.85
RPD3P32561 HSP60YLR259C 1719 nt9.76□□□□□ -0.85
RPD3P32561 YLR154C-GYLR154C-G 150 nt9.75□□□□□ -0.85
RPD3P32561 YLR281CYLR281C 468 nt9.7□□□□□ -0.86
RPD3P32561 WHI5YOR083W 888 nt9.69□□□□□ -0.86
RPD3P32561 ALG12YNR030W 1656 nt9.67□□□□□ -0.86
RPD3P32561 LYS4YDR234W 2082 nt9.66□□□□□ -0.86
RPD3P32561 PUS2YGL063W 1113 nt9.65□□□□□ -0.86
RPD3P32561 SIM1YIL123W 1431 nt9.65□□□□□ -0.87
RPD3P32561 GLK1YCL040W 1503 nt9.64□□□□□ -0.87
RPD3P32561 RRD1YIL153W 1182 nt9.57□□□□□ -0.88
RPD3P32561 PCM1YEL058W 1674 nt9.57□□□□□ -0.88
RPD3P32561 FMP52YER004W 696 nt9.55□□□□□ -0.88
RPD3P32561 IMP2'YIL154C 1041 nt9.53□□□□□ -0.88
RPD3P32561 FUR4YBR021W 1902 nt9.52□□□□□ -0.89
RPD3P32561 IDH1YNL037C 1083 nt9.51□□□□□ -0.89
RPD3P32561 BIO4YNR057C 714 nt9.5□□□□□ -0.89
RPD3P32561 DSK2YMR276W 1122 nt9.48□□□□□ -0.89
RPD3P32561 CSM2YIL132C 642 nt9.47□□□□□ -0.89
RPD3P32561 DED1YOR204W 1815 nt9.45□□□□□ -0.9
RPD3P32561 GBP2YCL011C 1284 nt9.44□□□□□ -0.9
RPD3P32561 PRP4YPR178W 1398 nt9.44□□□□□ -0.9
RPD3P32561 SNF6YHL025W 999 nt9.43□□□□□ -0.9
RPD3P32561 MRPL8YJL063C 717 nt9.42□□□□□ -0.9
RPD3P32561 FMT1YBL013W 1206 nt9.42□□□□□ -0.9
RPD3P32561 AAC1YMR056C 930 nt9.42□□□□□ -0.9
RPD3P32561 ADH2YMR303C 1047 nt9.42□□□□□ -0.9
RPD3P32561 TCD2YKL027W 1344 nt9.41□□□□□ -0.9
RPD3P32561 YHR056W-AYHR056W-A 435 nt9.41□□□□□ -0.9
RPD3P32561 ERF2YLR246W 1080 nt9.41□□□□□ -0.9
RPD3P32561 FMP45YDL222C 930 nt9.4□□□□□ -0.9
RPD3P32561 YEL076C-AYEL076C-A 651 nt9.4□□□□□ -0.9
RPD3P32561 YEL076CYEL076C 651 nt9.4□□□□□ -0.9
RPD3P32561 CWP1YKL096W 720 nt9.4□□□□□ -0.9
RPD3P32561 YLR464WYLR464W 651 nt9.4□□□□□ -0.9
RPD3P32561 NAR1YNL240C 1476 nt9.4□□□□□ -0.91
RPD3P32561 CRR1YLR213C 1269 nt9.39□□□□□ -0.91
RPD3P32561 MET8YBR213W 825 nt9.38□□□□□ -0.91
RPD3P32561 DPS1YLL018C 1674 nt9.38□□□□□ -0.91
RPD3P32561 CCA1YER168C 1641 nt9.38□□□□□ -0.91
RPD3P32561 YPR011CYPR011C 981 nt9.36□□□□□ -0.91
RPD3P32561 YDR433WYDR433W 441 nt9.35□□□□□ -0.91
RPD3P32561 RDN37-1RDN37-1 5354 nt9.35□□□□□ -0.91
RPD3P32561 RDN37-2RDN37-2 5354 nt9.35□□□□□ -0.91
RPD3P32561 RAX1YOR301W 1308 nt9.34□□□□□ -0.91
RPD3P32561 CLB6YGR109C 1143 nt9.34□□□□□ -0.91
RPD3P32561 HEM12YDR047W 1089 nt9.31□□□□□ -0.92
RPD3P32561 MIC10YCL057C-A 294 nt9.31□□□□□ -0.92
Retrieved 100 of 7,029 protein–RNA pairs in 19.4 ms