Protein–RNA interactions for Protein: P32497

NIP1, Eukaryotic translation initiation factor 3 subunit C, yeastyeast

Known RBP Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NIP1P32497 SEC11YIR022W 504 nt12.52□□□□□ -0.41
NIP1P32497 GUT2YIL155C 1950 nt12.52□□□□□ -0.41
NIP1P32497 LSM3YLR438C-A 270 nt12.5□□□□□ -0.41
NIP1P32497 ART5YGR068C 1761 nt12.48□□□□□ -0.41
NIP1P32497 RTS2YOR077W 699 nt12.47□□□□□ -0.41
NIP1P32497 GFD2YCL036W 1701 nt12.45□□□□□ -0.42
NIP1P32497 YSC84YHR016C 1407 nt12.44□□□□□ -0.42
NIP1P32497 Q0182Q0182 405 nt12.4□□□□□ -0.42
NIP1P32497 YFL021C-AYFL021C-A 855 nt12.32□□□□□ -0.44
NIP1P32497 YAL037C-BYAL037C-B 975 nt12.32□□□□□ -0.44
NIP1P32497 YOR139CYOR139C 393 nt12.32□□□□□ -0.44
NIP1P32497 YHL050CYHL050C 2094 nt12.31□□□□□ -0.44
NIP1P32497 PET9YBL030C 957 nt12.31□□□□□ -0.44
NIP1P32497 RRT12YCR045C 1476 nt12.29□□□□□ -0.44
NIP1P32497 PIB2YGL023C 1908 nt12.27□□□□□ -0.44
NIP1P32497 YGR021WYGR021W 873 nt12.26□□□□□ -0.45
NIP1P32497 CUE1YMR264W 612 nt12.25□□□□□ -0.45
NIP1P32497 RTF1YGL244W 1677 nt12.24□□□□□ -0.45
NIP1P32497 YNL195CYNL195C 786 nt12.22□□□□□ -0.45
NIP1P32497 TIR4YOR009W 1464 nt12.21□□□□□ -0.45
NIP1P32497 NPL3YDR432W 1245 nt12.21□□□□□ -0.45
NIP1P32497 HOM6YJR139C 1080 nt12.19□□□□□ -0.46
NIP1P32497 YMR057CYMR057C 372 nt12.19□□□□□ -0.46
NIP1P32497 YCH1YGR203W 447 nt12.18□□□□□ -0.46
NIP1P32497 YIL100WYIL100W 354 nt12.16□□□□□ -0.46
NIP1P32497 BOP3YNL042W 1191 nt12.13□□□□□ -0.47
NIP1P32497 MNP1YGL068W 585 nt12.12□□□□□ -0.47
NIP1P32497 NVJ2YPR091C 2313 nt12.11□□□□□ -0.47
NIP1P32497 YOL037CYOL037C 354 nt12.06□□□□□ -0.48
NIP1P32497 FPS1YLL043W 2010 nt12.05□□□□□ -0.48
NIP1P32497 PTK1YKL198C 1989 nt12.03□□□□□ -0.48
NIP1P32497 RKM5YLR137W 1104 nt12.03□□□□□ -0.48
NIP1P32497 YLR236CYLR236C 324 nt12.03□□□□□ -0.48
NIP1P32497 YJL152WYJL152W 360 nt11.97□□□□□ -0.49
NIP1P32497 YCL048W-AYCL048W-A 240 nt11.91□□□□□ -0.5
NIP1P32497 NCP1YHR042W 2076 nt11.9□□□□□ -0.51
NIP1P32497 YFL054CYFL054C 1941 nt11.87□□□□□ -0.51
NIP1P32497 tM(CAU)CtM(CAU)C 72 nt11.83□□□□□ -0.52
NIP1P32497 IMT4tM(CAU)E 72 nt11.83□□□□□ -0.52
NIP1P32497 IMT3tM(CAU)J3 72 nt11.83□□□□□ -0.52
NIP1P32497 IMT1tM(CAU)O1 72 nt11.83□□□□□ -0.52
NIP1P32497 IMT2tM(CAU)P 72 nt11.83□□□□□ -0.52
NIP1P32497 YLR154C-GYLR154C-G 150 nt11.83□□□□□ -0.52
NIP1P32497 LCB1YMR296C 1677 nt11.75□□□□□ -0.53
NIP1P32497 SPT8YLR055C 1809 nt11.74□□□□□ -0.53
NIP1P32497 BOR1YNL275W 1731 nt11.71□□□□□ -0.54
NIP1P32497 YLR281CYLR281C 468 nt11.7□□□□□ -0.54
NIP1P32497 PUS2YGL063W 1113 nt11.64□□□□□ -0.55
NIP1P32497 WHI5YOR083W 888 nt11.6□□□□□ -0.55
NIP1P32497 SIM1YIL123W 1431 nt11.59□□□□□ -0.55
NIP1P32497 RRD1YIL153W 1182 nt11.56□□□□□ -0.56
NIP1P32497 PCM1YEL058W 1674 nt11.52□□□□□ -0.56
NIP1P32497 SWE1YJL187C 2460 nt11.51□□□□□ -0.57
NIP1P32497 GBP2YCL011C 1284 nt11.51□□□□□ -0.57
NIP1P32497 MOT3YMR070W 1473 nt11.5□□□□□ -0.57
NIP1P32497 IDH1YNL037C 1083 nt11.49□□□□□ -0.57
NIP1P32497 LYS4YDR234W 2082 nt11.48□□□□□ -0.57
NIP1P32497 FMP52YER004W 696 nt11.48□□□□□ -0.57
NIP1P32497 TCD2YKL027W 1344 nt11.45□□□□□ -0.58
NIP1P32497 DED1YOR204W 1815 nt11.45□□□□□ -0.58
NIP1P32497 IMP2'YIL154C 1041 nt11.45□□□□□ -0.58
NIP1P32497 YJL225CYJL225C 5277 nt11.44□□□□□ -0.58
NIP1P32497 DSK2YMR276W 1122 nt11.43□□□□□ -0.58
NIP1P32497 HSP60YLR259C 1719 nt11.42□□□□□ -0.58
NIP1P32497 CWP1YKL096W 720 nt11.41□□□□□ -0.58
NIP1P32497 ADH2YMR303C 1047 nt11.41□□□□□ -0.58
NIP1P32497 BIO4YNR057C 714 nt11.41□□□□□ -0.58
NIP1P32497 FMT1YBL013W 1206 nt11.4□□□□□ -0.58
NIP1P32497 SNF6YHL025W 999 nt11.39□□□□□ -0.59
NIP1P32497 FMP45YDL222C 930 nt11.35□□□□□ -0.59
NIP1P32497 GLK1YCL040W 1503 nt11.31□□□□□ -0.6
NIP1P32497 YPR011CYPR011C 981 nt11.3□□□□□ -0.6
NIP1P32497 UME6YDR207C 2511 nt11.3□□□□□ -0.6
NIP1P32497 YDR433WYDR433W 441 nt11.27□□□□□ -0.61
NIP1P32497 ERF2YLR246W 1080 nt11.26□□□□□ -0.61
NIP1P32497 MXR2YCL033C 507 nt11.25□□□□□ -0.61
NIP1P32497 MRPL8YJL063C 717 nt11.23□□□□□ -0.61
NIP1P32497 FUR4YBR021W 1902 nt11.23□□□□□ -0.61
NIP1P32497 CRR1YLR213C 1269 nt11.22□□□□□ -0.61
NIP1P32497 YCL042WYCL042W 360 nt11.22□□□□□ -0.61
NIP1P32497 YHR056W-AYHR056W-A 435 nt11.2□□□□□ -0.62
NIP1P32497 ALG12YNR030W 1656 nt11.2□□□□□ -0.62
NIP1P32497 RDN37-1RDN37-1 5354 nt11.19□□□□□ -0.62
NIP1P32497 RDN37-2RDN37-2 5354 nt11.19□□□□□ -0.62
NIP1P32497 HEM12YDR047W 1089 nt11.18□□□□□ -0.62
NIP1P32497 YLL053CYLL053C 459 nt11.18□□□□□ -0.62
NIP1P32497 MIC10YCL057C-A 294 nt11.18□□□□□ -0.62
NIP1P32497 MCH5YOR306C 1566 nt11.16□□□□□ -0.62
NIP1P32497 ERV46YAL042W 1248 nt11.16□□□□□ -0.62
NIP1P32497 CCA1YER168C 1641 nt11.16□□□□□ -0.62
NIP1P32497 YIH1YCR059C 777 nt11.15□□□□□ -0.62
NIP1P32497 SOR2YDL246C 1074 nt11.15□□□□□ -0.62
NIP1P32497 SOR1YJR159W 1074 nt11.15□□□□□ -0.62
NIP1P32497 ATF2YGR177C 1608 nt11.13□□□□□ -0.63
NIP1P32497 RAX1YOR301W 1308 nt11.13□□□□□ -0.63
NIP1P32497 LPX1YOR084W 1164 nt11.11□□□□□ -0.63
NIP1P32497 RNQ1YCL028W 1218 nt11.11□□□□□ -0.63
NIP1P32497 SNG1YGR197C 1644 nt11.09□□□□□ -0.63
NIP1P32497 PRP4YPR178W 1398 nt11.09□□□□□ -0.63
NIP1P32497 YFL067WYFL067W 528 nt11.06□□□□□ -0.64
Retrieved 100 of 7,029 protein–RNA pairs in 12.6 ms