Protein–RNA interactions for Protein: P21576

VPS1, Vacuolar protein sorting-associated protein 1, yeastyeast

Known RBP Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS1P21576 tM(CAU)CtM(CAU)C 72 nt13.9□□□□□ -0.18
VPS1P21576 IMT4tM(CAU)E 72 nt13.9□□□□□ -0.18
VPS1P21576 IMT3tM(CAU)J3 72 nt13.9□□□□□ -0.18
VPS1P21576 IMT1tM(CAU)O1 72 nt13.9□□□□□ -0.18
VPS1P21576 IMT2tM(CAU)P 72 nt13.9□□□□□ -0.18
VPS1P21576 YLR154C-GYLR154C-G 150 nt13.88□□□□□ -0.19
VPS1P21576 ART5YGR068C 1761 nt13.88□□□□□ -0.19
VPS1P21576 TIR4YOR009W 1464 nt13.87□□□□□ -0.19
VPS1P21576 EMI2YDR516C 1503 nt13.85□□□□□ -0.19
VPS1P21576 GFD2YCL036W 1701 nt13.81□□□□□ -0.2
VPS1P21576 YCH1YGR203W 447 nt13.8□□□□□ -0.2
VPS1P21576 PUS2YGL063W 1113 nt13.79□□□□□ -0.2
VPS1P21576 YJL152WYJL152W 360 nt13.75□□□□□ -0.21
VPS1P21576 YDL221WYDL221W 552 nt13.74□□□□□ -0.21
VPS1P21576 IRC15YPL017C 1500 nt13.74□□□□□ -0.21
VPS1P21576 YPR011CYPR011C 981 nt13.73□□□□□ -0.21
VPS1P21576 PET9YBL030C 957 nt13.72□□□□□ -0.21
VPS1P21576 YMR057CYMR057C 372 nt13.71□□□□□ -0.21
VPS1P21576 RTS2YOR077W 699 nt13.68□□□□□ -0.22
VPS1P21576 YLR236CYLR236C 324 nt13.65□□□□□ -0.22
VPS1P21576 YBR220CYBR220C 1683 nt13.63□□□□□ -0.23
VPS1P21576 GIS3YLR094C 1509 nt13.62□□□□□ -0.23
VPS1P21576 YMR090WYMR090W 684 nt13.6□□□□□ -0.23
VPS1P21576 SDH1YKL148C 1923 nt13.58□□□□□ -0.24
VPS1P21576 DSK2YMR276W 1122 nt13.57□□□□□ -0.24
VPS1P21576 FPS1YLL043W 2010 nt13.56□□□□□ -0.24
VPS1P21576 SCC4YER147C 1875 nt13.5□□□□□ -0.25
VPS1P21576 BDF1YLR399C 2061 nt13.49□□□□□ -0.25
VPS1P21576 CUE1YMR264W 612 nt13.47□□□□□ -0.25
VPS1P21576 IDH1YNL037C 1083 nt13.45□□□□□ -0.26
VPS1P21576 FMP45YDL222C 930 nt13.44□□□□□ -0.26
VPS1P21576 IMP2'YIL154C 1041 nt13.44□□□□□ -0.26
VPS1P21576 YCL048W-AYCL048W-A 240 nt13.44□□□□□ -0.26
VPS1P21576 GBP2YCL011C 1284 nt13.41□□□□□ -0.26
VPS1P21576 LPX1YOR084W 1164 nt13.4□□□□□ -0.26
VPS1P21576 MXR2YCL033C 507 nt13.36□□□□□ -0.27
VPS1P21576 YDR433WYDR433W 441 nt13.34□□□□□ -0.27
VPS1P21576 RRD1YIL153W 1182 nt13.34□□□□□ -0.27
VPS1P21576 DED1YOR204W 1815 nt13.33□□□□□ -0.28
VPS1P21576 ERV46YAL042W 1248 nt13.32□□□□□ -0.28
VPS1P21576 TAT1YBR069C 1860 nt13.29□□□□□ -0.28
VPS1P21576 MOT3YMR070W 1473 nt13.29□□□□□ -0.28
VPS1P21576 YIL100WYIL100W 354 nt13.24□□□□□ -0.29
VPS1P21576 FMT1YBL013W 1206 nt13.23□□□□□ -0.29
VPS1P21576 RRT12YCR045C 1476 nt13.23□□□□□ -0.29
VPS1P21576 TCD2YKL027W 1344 nt13.22□□□□□ -0.29
VPS1P21576 SPP1YPL138C 1062 nt13.22□□□□□ -0.29
VPS1P21576 YKR040CYKR040C 504 nt13.21□□□□□ -0.29
VPS1P21576 YSC84YHR016C 1407 nt13.2□□□□□ -0.3
VPS1P21576 YHL050CYHL050C 2094 nt13.18□□□□□ -0.3
VPS1P21576 FRD1YEL047C 1413 nt13.09□□□□□ -0.31
VPS1P21576 ADH2YMR303C 1047 nt13.02□□□□□ -0.33
VPS1P21576 YNL195CYNL195C 786 nt13.02□□□□□ -0.33
VPS1P21576 PCH2YBR186W 1695 nt13.02□□□□□ -0.33
VPS1P21576 SOR2YDL246C 1074 nt13□□□□□ -0.33
VPS1P21576 FMP52YER004W 696 nt13□□□□□ -0.33
VPS1P21576 SOR1YJR159W 1074 nt13□□□□□ -0.33
VPS1P21576 CWP1YKL096W 720 nt13□□□□□ -0.33
VPS1P21576 SEC11YIR022W 504 nt12.99□□□□□ -0.33
VPS1P21576 PCM1YEL058W 1674 nt12.97□□□□□ -0.33
VPS1P21576 GUT2YIL155C 1950 nt12.97□□□□□ -0.33
VPS1P21576 YCL042WYCL042W 360 nt12.93□□□□□ -0.34
VPS1P21576 PIB2YGL023C 1908 nt12.89□□□□□ -0.35
VPS1P21576 PTH1YHR189W 573 nt12.87□□□□□ -0.35
VPS1P21576 RTG1YOL067C 534 nt12.86□□□□□ -0.35
VPS1P21576 LCB1YMR296C 1677 nt12.85□□□□□ -0.35
VPS1P21576 SNF6YHL025W 999 nt12.84□□□□□ -0.35
VPS1P21576 NCP1YHR042W 2076 nt12.83□□□□□ -0.36
VPS1P21576 BIO4YNR057C 714 nt12.76□□□□□ -0.37
VPS1P21576 SIM1YIL123W 1431 nt12.75□□□□□ -0.37
VPS1P21576 YIH1YCR059C 777 nt12.74□□□□□ -0.37
VPS1P21576 RTF1YGL244W 1677 nt12.73□□□□□ -0.37
VPS1P21576 DIC1YLR348C 897 nt12.71□□□□□ -0.37
VPS1P21576 RNQ1YCL028W 1218 nt12.71□□□□□ -0.37
VPS1P21576 PAC11YDR488C 1602 nt12.7□□□□□ -0.38
VPS1P21576 YEL076C-AYEL076C-A 651 nt12.69□□□□□ -0.38
VPS1P21576 YEL076CYEL076C 651 nt12.69□□□□□ -0.38
VPS1P21576 YLR464WYLR464W 651 nt12.69□□□□□ -0.38
VPS1P21576 YLL053CYLL053C 459 nt12.67□□□□□ -0.38
VPS1P21576 YLR235CYLR235C 399 nt12.67□□□□□ -0.38
VPS1P21576 BOP3YNL042W 1191 nt12.67□□□□□ -0.38
VPS1P21576 PTK1YKL198C 1989 nt12.64□□□□□ -0.39
VPS1P21576 MRPL8YJL063C 717 nt12.64□□□□□ -0.39
VPS1P21576 YKL030WYKL030W 606 nt12.63□□□□□ -0.39
VPS1P21576 LYS4YDR234W 2082 nt12.6□□□□□ -0.39
VPS1P21576 TIM23YNR017W 669 nt12.59□□□□□ -0.39
VPS1P21576 FTR1YER145C 1215 nt12.55□□□□□ -0.4
VPS1P21576 ATF2YGR177C 1608 nt12.54□□□□□ -0.4
VPS1P21576 GAL1YBR020W 1587 nt12.53□□□□□ -0.4
VPS1P21576 YLR179CYLR179C 606 nt12.53□□□□□ -0.4
VPS1P21576 TRM5YHR070W 1500 nt12.52□□□□□ -0.41
VPS1P21576 WSC2YNL283C 1512 nt12.51□□□□□ -0.41
VPS1P21576 ADO1YJR105W 1023 nt12.5□□□□□ -0.41
VPS1P21576 CRR1YLR213C 1269 nt12.48□□□□□ -0.41
VPS1P21576 HUA1YGR268C 597 nt12.47□□□□□ -0.41
VPS1P21576 ERF2YLR246W 1080 nt12.46□□□□□ -0.41
VPS1P21576 AHT1YHR093W 549 nt12.44□□□□□ -0.42
VPS1P21576 MIC10YCL057C-A 294 nt12.43□□□□□ -0.42
VPS1P21576 NVJ2YPR091C 2313 nt12.4□□□□□ -0.42
VPS1P21576 SNG1YGR197C 1644 nt12.38□□□□□ -0.43
Retrieved 100 of 7,029 protein–RNA pairs in 9.8 ms