Protein–RNA interactions for Protein: P04819

CDC9, DNA ligase 1, yeastyeast

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC9P04819 EMI2YDR516C 1503 nt11.34□□□□□ -0.59
CDC9P04819 FUN26YAL022C 1554 nt11.32□□□□□ -0.6
CDC9P04819 YBR220CYBR220C 1683 nt11.3□□□□□ -0.6
CDC9P04819 YMR090WYMR090W 684 nt11.26□□□□□ -0.61
CDC9P04819 PTP1YDL230W 1008 nt11.25□□□□□ -0.61
CDC9P04819 YDL221WYDL221W 552 nt11.23□□□□□ -0.61
CDC9P04819 MRPL8YJL063C 717 nt11.23□□□□□ -0.61
CDC9P04819 CAC2YML102W 1407 nt11.23□□□□□ -0.61
CDC9P04819 DSK2YMR276W 1122 nt11.22□□□□□ -0.61
CDC9P04819 ALF1YNL148C 765 nt11.21□□□□□ -0.61
CDC9P04819 RPP2AYOL039W 321 nt11.21□□□□□ -0.61
CDC9P04819 FMP45YDL222C 930 nt11.2□□□□□ -0.62
CDC9P04819 IMP2'YIL154C 1041 nt11.2□□□□□ -0.62
CDC9P04819 TRM9YML014W 840 nt11.19□□□□□ -0.62
CDC9P04819 YPR011CYPR011C 981 nt11.18□□□□□ -0.62
CDC9P04819 SDH1YKL148C 1923 nt11.17□□□□□ -0.62
CDC9P04819 YCH1YGR203W 447 nt11.15□□□□□ -0.62
CDC9P04819 YLR236CYLR236C 324 nt11.14□□□□□ -0.63
CDC9P04819 CCT6YDR188W 1641 nt11.13□□□□□ -0.63
CDC9P04819 YLR154C-GYLR154C-G 150 nt11.09□□□□□ -0.63
CDC9P04819 SIS1YNL007C 1059 nt11.09□□□□□ -0.63
CDC9P04819 IRC15YPL017C 1500 nt11.07□□□□□ -0.64
CDC9P04819 SCC4YER147C 1875 nt11.04□□□□□ -0.64
CDC9P04819 SUF2tP(AGG)C 72 nt11.03□□□□□ -0.64
CDC9P04819 SUF10tP(AGG)N 72 nt11.03□□□□□ -0.64
CDC9P04819 ADO1YJR105W 1023 nt11.02□□□□□ -0.65
CDC9P04819 GIS3YLR094C 1509 nt10.99□□□□□ -0.65
CDC9P04819 GFD2YCL036W 1701 nt10.97□□□□□ -0.65
CDC9P04819 ART5YGR068C 1761 nt10.96□□□□□ -0.65
CDC9P04819 YEL076C-AYEL076C-A 651 nt10.95□□□□□ -0.66
CDC9P04819 YEL076CYEL076C 651 nt10.95□□□□□ -0.66
CDC9P04819 YLR464WYLR464W 651 nt10.95□□□□□ -0.66
CDC9P04819 FPS1YLL043W 2010 nt10.95□□□□□ -0.66
CDC9P04819 ERV46YAL042W 1248 nt10.94□□□□□ -0.66
CDC9P04819 PCH2YBR186W 1695 nt10.94□□□□□ -0.66
CDC9P04819 GUT2YIL155C 1950 nt10.91□□□□□ -0.66
CDC9P04819 SEC11YIR022W 504 nt10.91□□□□□ -0.66
CDC9P04819 LPX1YOR084W 1164 nt10.91□□□□□ -0.66
CDC9P04819 UBX6YJL048C 1191 nt10.89□□□□□ -0.67
CDC9P04819 RTS2YOR077W 699 nt10.89□□□□□ -0.67
CDC9P04819 RTG1YOL067C 534 nt10.88□□□□□ -0.67
CDC9P04819 PET9YBL030C 957 nt10.86□□□□□ -0.67
CDC9P04819 IDH1YNL037C 1083 nt10.85□□□□□ -0.67
CDC9P04819 SPP1YPL138C 1062 nt10.85□□□□□ -0.67
CDC9P04819 YSC84YHR016C 1407 nt10.84□□□□□ -0.67
CDC9P04819 YJL152WYJL152W 360 nt10.83□□□□□ -0.68
CDC9P04819 PAC11YDR488C 1602 nt10.83□□□□□ -0.68
CDC9P04819 TIR4YOR009W 1464 nt10.8□□□□□ -0.68
CDC9P04819 YHL050CYHL050C 2094 nt10.78□□□□□ -0.68
CDC9P04819 YKR040CYKR040C 504 nt10.78□□□□□ -0.68
CDC9P04819 CUE1YMR264W 612 nt10.78□□□□□ -0.68
CDC9P04819 NME1NME1 340 nt10.78□□□□□ -0.68
CDC9P04819 PIB2YGL023C 1908 nt10.77□□□□□ -0.69
CDC9P04819 YDR433WYDR433W 441 nt10.76□□□□□ -0.69
CDC9P04819 RRT12YCR045C 1476 nt10.71□□□□□ -0.69
CDC9P04819 YMR057CYMR057C 372 nt10.7□□□□□ -0.7
CDC9P04819 HUA1YGR268C 597 nt10.67□□□□□ -0.7
CDC9P04819 GBP2YCL011C 1284 nt10.67□□□□□ -0.7
CDC9P04819 YDR094WYDR094W 336 nt10.66□□□□□ -0.7
CDC9P04819 RTF1YGL244W 1677 nt10.65□□□□□ -0.7
CDC9P04819 YIL100WYIL100W 354 nt10.62□□□□□ -0.71
CDC9P04819 MXR2YCL033C 507 nt10.62□□□□□ -0.71
CDC9P04819 YNL195CYNL195C 786 nt10.61□□□□□ -0.71
CDC9P04819 YFL015W-AYFL015W-A 318 nt10.58□□□□□ -0.72
CDC9P04819 BOP3YNL042W 1191 nt10.56□□□□□ -0.72
CDC9P04819 PTK1YKL198C 1989 nt10.52□□□□□ -0.73
CDC9P04819 TCD2YKL027W 1344 nt10.51□□□□□ -0.73
CDC9P04819 NVJ2YPR091C 2313 nt10.5□□□□□ -0.73
CDC9P04819 YCL048W-AYCL048W-A 240 nt10.49□□□□□ -0.73
CDC9P04819 NCP1YHR042W 2076 nt10.48□□□□□ -0.73
CDC9P04819 FRD1YEL047C 1413 nt10.46□□□□□ -0.74
CDC9P04819 DED1YOR204W 1815 nt10.42□□□□□ -0.74
CDC9P04819 YJL225CYJL225C 5277 nt10.39□□□□□ -0.75
CDC9P04819 YKL030WYKL030W 606 nt10.38□□□□□ -0.75
CDC9P04819 RRD1YIL153W 1182 nt10.36□□□□□ -0.75
CDC9P04819 YLR235CYLR235C 399 nt10.36□□□□□ -0.75
CDC9P04819 PTH1YHR189W 573 nt10.33□□□□□ -0.76
CDC9P04819 LCB1YMR296C 1677 nt10.33□□□□□ -0.76
CDC9P04819 SOR2YDL246C 1074 nt10.32□□□□□ -0.76
CDC9P04819 SOR1YJR159W 1074 nt10.32□□□□□ -0.76
CDC9P04819 YCL042WYCL042W 360 nt10.31□□□□□ -0.76
CDC9P04819 YFL054CYFL054C 1941 nt10.28□□□□□ -0.76
CDC9P04819 SBA1YKL117W 651 nt10.25□□□□□ -0.77
CDC9P04819 FMT1YBL013W 1206 nt10.25□□□□□ -0.77
CDC9P04819 YFR018CYFR018C 1092 nt10.23□□□□□ -0.77
CDC9P04819 SPT8YLR055C 1809 nt10.23□□□□□ -0.77
CDC9P04819 PAU16YKL224C 372 nt10.22□□□□□ -0.77
CDC9P04819 FMP52YER004W 696 nt10.19□□□□□ -0.78
CDC9P04819 RPM1RPM1 483 nt10.19□□□□□ -0.78
CDC9P04819 RRT5YFR032C 870 nt10.17□□□□□ -0.78
CDC9P04819 tL(GAG)GtL(GAG)G 82 nt10.17□□□□□ -0.78
CDC9P04819 FRE6YLL051C 2139 nt10.17□□□□□ -0.78
CDC9P04819 PCM1YEL058W 1674 nt10.16□□□□□ -0.78
CDC9P04819 RDN37-1RDN37-1 5354 nt10.16□□□□□ -0.78
CDC9P04819 RDN37-2RDN37-2 5354 nt10.16□□□□□ -0.78
CDC9P04819 SIM1YIL123W 1431 nt10.14□□□□□ -0.79
CDC9P04819 LYS4YDR234W 2082 nt10.13□□□□□ -0.79
CDC9P04819 TIM23YNR017W 669 nt10.11□□□□□ -0.79
CDC9P04819 CWP1YKL096W 720 nt10.09□□□□□ -0.79
CDC9P04819 PRE6YOL038W 765 nt10.09□□□□□ -0.79
Retrieved 100 of 7,029 protein–RNA pairs in 13.1 ms