Protein–RNA interactions for Protein: P02381

VAR1, Ribosomal protein VAR1, mitochondrial, yeastyeast

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VAR1P02381 RDN37-2RDN37-2 5354 nt9.46□□□□□ -0.9
VAR1P02381 PTP1YDL230W 1008 nt9.43□□□□□ -0.9
VAR1P02381 YBR220CYBR220C 1683 nt9.42□□□□□ -0.9
VAR1P02381 MNP1YGL068W 585 nt9.41□□□□□ -0.9
VAR1P02381 SIS1YNL007C 1059 nt9.41□□□□□ -0.9
VAR1P02381 CAC2YML102W 1407 nt9.4□□□□□ -0.9
VAR1P02381 YDL221WYDL221W 552 nt9.39□□□□□ -0.91
VAR1P02381 RKM5YLR137W 1104 nt9.35□□□□□ -0.91
VAR1P02381 PCH2YBR186W 1695 nt9.32□□□□□ -0.92
VAR1P02381 SDH1YKL148C 1923 nt9.31□□□□□ -0.92
VAR1P02381 GUT2YIL155C 1950 nt9.3□□□□□ -0.92
VAR1P02381 ART5YGR068C 1761 nt9.29□□□□□ -0.92
VAR1P02381 IRC15YPL017C 1500 nt9.26□□□□□ -0.93
VAR1P02381 GFD2YCL036W 1701 nt9.26□□□□□ -0.93
VAR1P02381 SEC11YIR022W 504 nt9.26□□□□□ -0.93
VAR1P02381 SCC4YER147C 1875 nt9.23□□□□□ -0.93
VAR1P02381 PET9YBL030C 957 nt9.23□□□□□ -0.93
VAR1P02381 YCH1YGR203W 447 nt9.21□□□□□ -0.94
VAR1P02381 RTS2YOR077W 699 nt9.21□□□□□ -0.94
VAR1P02381 GIS3YLR094C 1509 nt9.21□□□□□ -0.94
VAR1P02381 TIR4YOR009W 1464 nt9.19□□□□□ -0.94
VAR1P02381 YOL037CYOL037C 354 nt9.18□□□□□ -0.94
VAR1P02381 PIB2YGL023C 1908 nt9.13□□□□□ -0.95
VAR1P02381 YJL152WYJL152W 360 nt9.13□□□□□ -0.95
VAR1P02381 YMR057CYMR057C 372 nt9.13□□□□□ -0.95
VAR1P02381 NPL3YDR432W 1245 nt9.11□□□□□ -0.95
VAR1P02381 YLR154C-GYLR154C-G 150 nt9.11□□□□□ -0.95
VAR1P02381 CUE1YMR264W 612 nt9.11□□□□□ -0.95
VAR1P02381 YOR139CYOR139C 393 nt9.07□□□□□ -0.96
VAR1P02381 YIL100WYIL100W 354 nt9.05□□□□□ -0.96
VAR1P02381 YSC84YHR016C 1407 nt9.04□□□□□ -0.96
VAR1P02381 BOR1YNL275W 1731 nt9.02□□□□□ -0.96
VAR1P02381 YCL048W-AYCL048W-A 240 nt9.02□□□□□ -0.97
VAR1P02381 YLR236CYLR236C 324 nt9.01□□□□□ -0.97
VAR1P02381 RPM1RPM1 483 nt9.01□□□□□ -0.97
VAR1P02381 YNL195CYNL195C 786 nt9.01□□□□□ -0.97
VAR1P02381 MCH5YOR306C 1566 nt9□□□□□ -0.97
VAR1P02381 RTF1YGL244W 1677 nt8.99□□□□□ -0.97
VAR1P02381 WHI5YOR083W 888 nt8.98□□□□□ -0.97
VAR1P02381 RRT12YCR045C 1476 nt8.96□□□□□ -0.97
VAR1P02381 YLR281CYLR281C 468 nt8.95□□□□□ -0.98
VAR1P02381 YHL050CYHL050C 2094 nt8.95□□□□□ -0.98
VAR1P02381 IDH1YNL037C 1083 nt8.87□□□□□ -0.99
VAR1P02381 BOP3YNL042W 1191 nt8.86□□□□□ -0.99
VAR1P02381 PTK1YKL198C 1989 nt8.86□□□□□ -0.99
VAR1P02381 PUS2YGL063W 1113 nt8.83□□□□□ -1
VAR1P02381 GBP2YCL011C 1284 nt8.83□□□□□ -1
VAR1P02381 IMP2'YIL154C 1041 nt8.8□□□□□ -1
VAR1P02381 DSK2YMR276W 1122 nt8.78□□□□□ -1
VAR1P02381 TCD2YKL027W 1344 nt8.77□□□□□ -1.01
VAR1P02381 RRD1YIL153W 1182 nt8.76□□□□□ -1.01
VAR1P02381 tM(CAU)CtM(CAU)C 72 nt8.75□□□□□ -1.01
VAR1P02381 IMT4tM(CAU)E 72 nt8.75□□□□□ -1.01
VAR1P02381 IMT3tM(CAU)J3 72 nt8.75□□□□□ -1.01
VAR1P02381 IMT1tM(CAU)O1 72 nt8.75□□□□□ -1.01
VAR1P02381 IMT2tM(CAU)P 72 nt8.75□□□□□ -1.01
VAR1P02381 ALG12YNR030W 1656 nt8.72□□□□□ -1.01
VAR1P02381 YDR433WYDR433W 441 nt8.71□□□□□ -1.02
VAR1P02381 FMP52YER004W 696 nt8.71□□□□□ -1.02
VAR1P02381 DED1YOR204W 1815 nt8.69□□□□□ -1.02
VAR1P02381 YPR011CYPR011C 981 nt8.66□□□□□ -1.02
VAR1P02381 NCP1YHR042W 2076 nt8.65□□□□□ -1.02
VAR1P02381 FMP45YDL222C 930 nt8.65□□□□□ -1.02
VAR1P02381 MXR2YCL033C 507 nt8.65□□□□□ -1.02
VAR1P02381 PCM1YEL058W 1674 nt8.65□□□□□ -1.03
VAR1P02381 LCB1YMR296C 1677 nt8.65□□□□□ -1.03
VAR1P02381 FMT1YBL013W 1206 nt8.64□□□□□ -1.03
VAR1P02381 SPT8YLR055C 1809 nt8.64□□□□□ -1.03
VAR1P02381 CWP1YKL096W 720 nt8.63□□□□□ -1.03
VAR1P02381 SIM1YIL123W 1431 nt8.62□□□□□ -1.03
VAR1P02381 HSP60YLR259C 1719 nt8.61□□□□□ -1.03
VAR1P02381 SNF6YHL025W 999 nt8.6□□□□□ -1.03
VAR1P02381 ADH2YMR303C 1047 nt8.6□□□□□ -1.03
VAR1P02381 LPX1YOR084W 1164 nt8.6□□□□□ -1.03
VAR1P02381 YCL042WYCL042W 360 nt8.6□□□□□ -1.03
VAR1P02381 YFL054CYFL054C 1941 nt8.6□□□□□ -1.03
VAR1P02381 ERV46YAL042W 1248 nt8.59□□□□□ -1.03
VAR1P02381 YKR040CYKR040C 504 nt8.58□□□□□ -1.04
VAR1P02381 SOR2YDL246C 1074 nt8.56□□□□□ -1.04
VAR1P02381 SOR1YJR159W 1074 nt8.56□□□□□ -1.04
VAR1P02381 BIO4YNR057C 714 nt8.52□□□□□ -1.05
VAR1P02381 FRD1YEL047C 1413 nt8.5□□□□□ -1.05
VAR1P02381 YIH1YCR059C 777 nt8.46□□□□□ -1.06
VAR1P02381 HSL7YBR133C 2484 nt8.44□□□□□ -1.06
VAR1P02381 ERF2YLR246W 1080 nt8.44□□□□□ -1.06
VAR1P02381 RNQ1YCL028W 1218 nt8.44□□□□□ -1.06
VAR1P02381 LYS4YDR234W 2082 nt8.44□□□□□ -1.06
VAR1P02381 YLL053CYLL053C 459 nt8.43□□□□□ -1.06
VAR1P02381 GLK1YCL040W 1503 nt8.43□□□□□ -1.06
VAR1P02381 NAR1YNL240C 1476 nt8.41□□□□□ -1.06
VAR1P02381 SWE1YJL187C 2460 nt8.4□□□□□ -1.07
VAR1P02381 CRR1YLR213C 1269 nt8.38□□□□□ -1.07
VAR1P02381 DIC1YLR348C 897 nt8.38□□□□□ -1.07
VAR1P02381 RDN25-1RDN25-1 3396 nt8.36□□□□□ -1.07
VAR1P02381 RDN25-2RDN25-2 3396 nt8.36□□□□□ -1.07
VAR1P02381 Q0182Q0182 405 nt8.36□□□□□ -1.07
VAR1P02381 SSN3YPL042C 1668 nt8.34□□□□□ -1.07
VAR1P02381 FTR1YER145C 1215 nt8.34□□□□□ -1.07
VAR1P02381 ATF2YGR177C 1608 nt8.33□□□□□ -1.08
VAR1P02381 HEM12YDR047W 1089 nt8.33□□□□□ -1.08
Retrieved 100 of 7,029 protein–RNA pairs in 10.9 ms