Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
RNF103-CHMP3A0A140T963 ST7-202ENST00000323984 2142 ntTSL 5 BASIC27.44■■□□□ 1.98
RNF103-CHMP3A0A140T963 ST7-207ENST00000393449 2127 ntTSL 5 BASIC27.44■■□□□ 1.98
RNF103-CHMP3A0A140T963 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
RNF103-CHMP3A0A140T963 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC27.44■■□□□ 1.98
RNF103-CHMP3A0A140T963 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC27.43■■□□□ 1.98
RNF103-CHMP3A0A140T963 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC27.39■■□□□ 1.97
RNF103-CHMP3A0A140T963 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
RNF103-CHMP3A0A140T963 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC27.37■■□□□ 1.97
RNF103-CHMP3A0A140T963 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC27.37■■□□□ 1.97
RNF103-CHMP3A0A140T963 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
RNF103-CHMP3A0A140T963 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
RNF103-CHMP3A0A140T963 AC015813.7-201ENST00000623294 581 ntBASIC27.34■■□□□ 1.97
RNF103-CHMP3A0A140T963 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC27.33■■□□□ 1.96
RNF103-CHMP3A0A140T963 AC145285.7-201ENST00000614819 1539 ntBASIC27.32■■□□□ 1.96
RNF103-CHMP3A0A140T963 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
RNF103-CHMP3A0A140T963 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC27.27■■□□□ 1.96
RNF103-CHMP3A0A140T963 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC27.25■■□□□ 1.95
RNF103-CHMP3A0A140T963 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
RNF103-CHMP3A0A140T963 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
RNF103-CHMP3A0A140T963 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC27.21■■□□□ 1.95
RNF103-CHMP3A0A140T963 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC27.2■■□□□ 1.94
RNF103-CHMP3A0A140T963 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC27.18■■□□□ 1.94
RNF103-CHMP3A0A140T963 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC27.16■■□□□ 1.94
RNF103-CHMP3A0A140T963 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC27.16■■□□□ 1.94
RNF103-CHMP3A0A140T963 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC27.16■■□□□ 1.94
RNF103-CHMP3A0A140T963 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
RNF103-CHMP3A0A140T963 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC27.13■■□□□ 1.93
RNF103-CHMP3A0A140T963 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC27.13■■□□□ 1.93
RNF103-CHMP3A0A140T963 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
RNF103-CHMP3A0A140T963 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC27.12■■□□□ 1.93
RNF103-CHMP3A0A140T963 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC27.12■■□□□ 1.93
RNF103-CHMP3A0A140T963 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC27.11■■□□□ 1.93
RNF103-CHMP3A0A140T963 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
RNF103-CHMP3A0A140T963 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
RNF103-CHMP3A0A140T963 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
RNF103-CHMP3A0A140T963 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC27.05■■□□□ 1.92
RNF103-CHMP3A0A140T963 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
RNF103-CHMP3A0A140T963 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
RNF103-CHMP3A0A140T963 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC27.02■■□□□ 1.92
RNF103-CHMP3A0A140T963 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
RNF103-CHMP3A0A140T963 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
RNF103-CHMP3A0A140T963 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
RNF103-CHMP3A0A140T963 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC26.98■■□□□ 1.91
RNF103-CHMP3A0A140T963 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
RNF103-CHMP3A0A140T963 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
RNF103-CHMP3A0A140T963 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
RNF103-CHMP3A0A140T963 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
RNF103-CHMP3A0A140T963 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
RNF103-CHMP3A0A140T963 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
RNF103-CHMP3A0A140T963 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
RNF103-CHMP3A0A140T963 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC26.89■■□□□ 1.9
RNF103-CHMP3A0A140T963 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
RNF103-CHMP3A0A140T963 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC26.86■■□□□ 1.89
RNF103-CHMP3A0A140T963 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC26.86■■□□□ 1.89
RNF103-CHMP3A0A140T963 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC26.86■■□□□ 1.89
RNF103-CHMP3A0A140T963 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
RNF103-CHMP3A0A140T963 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC26.86■■□□□ 1.89
RNF103-CHMP3A0A140T963 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
RNF103-CHMP3A0A140T963 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
RNF103-CHMP3A0A140T963 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
RNF103-CHMP3A0A140T963 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
RNF103-CHMP3A0A140T963 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC26.81■■□□□ 1.88
RNF103-CHMP3A0A140T963 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
RNF103-CHMP3A0A140T963 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC26.78■■□□□ 1.88
RNF103-CHMP3A0A140T963 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC26.77■■□□□ 1.88
RNF103-CHMP3A0A140T963 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC26.74■■□□□ 1.87
RNF103-CHMP3A0A140T963 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
RNF103-CHMP3A0A140T963 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
RNF103-CHMP3A0A140T963 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
RNF103-CHMP3A0A140T963 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
RNF103-CHMP3A0A140T963 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
RNF103-CHMP3A0A140T963 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
RNF103-CHMP3A0A140T963 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC26.69■■□□□ 1.86
RNF103-CHMP3A0A140T963 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC26.68■■□□□ 1.86
RNF103-CHMP3A0A140T963 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC26.67■■□□□ 1.86
RNF103-CHMP3A0A140T963 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
RNF103-CHMP3A0A140T963 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
RNF103-CHMP3A0A140T963 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
RNF103-CHMP3A0A140T963 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
RNF103-CHMP3A0A140T963 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC26.65■■□□□ 1.86
RNF103-CHMP3A0A140T963 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
RNF103-CHMP3A0A140T963 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC26.64■■□□□ 1.86
RNF103-CHMP3A0A140T963 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC26.63■■□□□ 1.85
RNF103-CHMP3A0A140T963 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
RNF103-CHMP3A0A140T963 AC006077.2-201ENST00000623591 457 ntBASIC26.6■■□□□ 1.85
RNF103-CHMP3A0A140T963 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC26.59■■□□□ 1.85
RNF103-CHMP3A0A140T963 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
RNF103-CHMP3A0A140T963 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC26.58■■□□□ 1.85
RNF103-CHMP3A0A140T963 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
RNF103-CHMP3A0A140T963 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC26.58■■□□□ 1.85
RNF103-CHMP3A0A140T963 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
RNF103-CHMP3A0A140T963 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
RNF103-CHMP3A0A140T963 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC26.57■■□□□ 1.84
RNF103-CHMP3A0A140T963 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
RNF103-CHMP3A0A140T963 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
RNF103-CHMP3A0A140T963 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
RNF103-CHMP3A0A140T963 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC26.53■■□□□ 1.84
RNF103-CHMP3A0A140T963 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC26.51■■□□□ 1.83
RNF103-CHMP3A0A140T963 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms