Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
TRAV2A0A0B4J234 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TRAV2A0A0B4J234 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC21.57■■□□□ 1.04
TRAV2A0A0B4J234 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TRAV2A0A0B4J234 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRAV2A0A0B4J234 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
TRAV2A0A0B4J234 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRAV2A0A0B4J234 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
TRAV2A0A0B4J234 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC21.49■■□□□ 1.03
TRAV2A0A0B4J234 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRAV2A0A0B4J234 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC21.48■■□□□ 1.03
TRAV2A0A0B4J234 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
TRAV2A0A0B4J234 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC21.47■■□□□ 1.03
TRAV2A0A0B4J234 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC21.47■■□□□ 1.03
TRAV2A0A0B4J234 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRAV2A0A0B4J234 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRAV2A0A0B4J234 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC21.44■■□□□ 1.02
TRAV2A0A0B4J234 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
TRAV2A0A0B4J234 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRAV2A0A0B4J234 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRAV2A0A0B4J234 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRAV2A0A0B4J234 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
TRAV2A0A0B4J234 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
TRAV2A0A0B4J234 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRAV2A0A0B4J234 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
TRAV2A0A0B4J234 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC21.32■■□□□ 1
TRAV2A0A0B4J234 AP002365.1-201ENST00000603448 772 ntBASIC21.31■■□□□ 1
TRAV2A0A0B4J234 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRAV2A0A0B4J234 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRAV2A0A0B4J234 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
TRAV2A0A0B4J234 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRAV2A0A0B4J234 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
TRAV2A0A0B4J234 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
TRAV2A0A0B4J234 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRAV2A0A0B4J234 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRAV2A0A0B4J234 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
TRAV2A0A0B4J234 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRAV2A0A0B4J234 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TRAV2A0A0B4J234 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TRAV2A0A0B4J234 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRAV2A0A0B4J234 DYNLL1-208ENST00000550178 581 ntBASIC21.23■□□□□ 0.99
TRAV2A0A0B4J234 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC21.21■□□□□ 0.99
TRAV2A0A0B4J234 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC21.21■□□□□ 0.99
TRAV2A0A0B4J234 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRAV2A0A0B4J234 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRAV2A0A0B4J234 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRAV2A0A0B4J234 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC21.19■□□□□ 0.98
TRAV2A0A0B4J234 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC21.19■□□□□ 0.98
TRAV2A0A0B4J234 MVK-208ENST00000539696 608 ntTSL 5 BASIC21.18■□□□□ 0.98
TRAV2A0A0B4J234 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRAV2A0A0B4J234 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC21.17■□□□□ 0.98
TRAV2A0A0B4J234 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRAV2A0A0B4J234 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC21.16■□□□□ 0.98
TRAV2A0A0B4J234 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRAV2A0A0B4J234 EBPL-203ENST00000378270 579 ntTSL 2 BASIC21.15■□□□□ 0.98
TRAV2A0A0B4J234 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
TRAV2A0A0B4J234 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRAV2A0A0B4J234 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC21.12■□□□□ 0.97
TRAV2A0A0B4J234 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRAV2A0A0B4J234 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRAV2A0A0B4J234 AL031258.1-201ENST00000623562 325 ntBASIC21.11■□□□□ 0.97
TRAV2A0A0B4J234 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRAV2A0A0B4J234 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRAV2A0A0B4J234 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TRAV2A0A0B4J234 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
TRAV2A0A0B4J234 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
TRAV2A0A0B4J234 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TRAV2A0A0B4J234 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC21.07■□□□□ 0.96
TRAV2A0A0B4J234 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRAV2A0A0B4J234 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRAV2A0A0B4J234 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRAV2A0A0B4J234 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRAV2A0A0B4J234 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC21.05■□□□□ 0.96
TRAV2A0A0B4J234 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRAV2A0A0B4J234 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC21.04■□□□□ 0.96
TRAV2A0A0B4J234 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC21.03■□□□□ 0.96
TRAV2A0A0B4J234 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TRAV2A0A0B4J234 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
TRAV2A0A0B4J234 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
TRAV2A0A0B4J234 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC21.03■□□□□ 0.96
TRAV2A0A0B4J234 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
TRAV2A0A0B4J234 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRAV2A0A0B4J234 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRAV2A0A0B4J234 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRAV2A0A0B4J234 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC20.99■□□□□ 0.95
TRAV2A0A0B4J234 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRAV2A0A0B4J234 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRAV2A0A0B4J234 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.95
TRAV2A0A0B4J234 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRAV2A0A0B4J234 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRAV2A0A0B4J234 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRAV2A0A0B4J234 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC20.94■□□□□ 0.94
TRAV2A0A0B4J234 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC20.92■□□□□ 0.94
TRAV2A0A0B4J234 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC20.92■□□□□ 0.94
TRAV2A0A0B4J234 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRAV2A0A0B4J234 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRAV2A0A0B4J234 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TRAV2A0A0B4J234 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC20.88■□□□□ 0.93
TRAV2A0A0B4J234 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRAV2A0A0B4J234 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms