Protein–RNA interactions for Protein: A0A075B6T8

TRAV9-1, T-cell receptor alpha variable 9-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-1A0A075B6T8 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
TRAV9-1A0A075B6T8 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
TRAV9-1A0A075B6T8 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
TRAV9-1A0A075B6T8 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC22.05■■□□□ 1.12
TRAV9-1A0A075B6T8 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC22.01■■□□□ 1.11
TRAV9-1A0A075B6T8 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
TRAV9-1A0A075B6T8 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
TRAV9-1A0A075B6T8 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
TRAV9-1A0A075B6T8 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
TRAV9-1A0A075B6T8 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
TRAV9-1A0A075B6T8 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC21.94■■□□□ 1.1
TRAV9-1A0A075B6T8 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
TRAV9-1A0A075B6T8 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC21.92■■□□□ 1.1
TRAV9-1A0A075B6T8 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TRAV9-1A0A075B6T8 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC21.92■■□□□ 1.1
TRAV9-1A0A075B6T8 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
TRAV9-1A0A075B6T8 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TRAV9-1A0A075B6T8 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
TRAV9-1A0A075B6T8 AL161658.1-201ENST00000623641 1967 ntBASIC21.87■■□□□ 1.09
TRAV9-1A0A075B6T8 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TRAV9-1A0A075B6T8 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TRAV9-1A0A075B6T8 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TRAV9-1A0A075B6T8 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
TRAV9-1A0A075B6T8 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
TRAV9-1A0A075B6T8 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRAV9-1A0A075B6T8 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRAV9-1A0A075B6T8 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRAV9-1A0A075B6T8 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRAV9-1A0A075B6T8 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRAV9-1A0A075B6T8 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
TRAV9-1A0A075B6T8 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC21.72■■□□□ 1.07
TRAV9-1A0A075B6T8 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRAV9-1A0A075B6T8 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRAV9-1A0A075B6T8 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRAV9-1A0A075B6T8 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
TRAV9-1A0A075B6T8 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRAV9-1A0A075B6T8 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
TRAV9-1A0A075B6T8 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRAV9-1A0A075B6T8 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRAV9-1A0A075B6T8 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
TRAV9-1A0A075B6T8 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRAV9-1A0A075B6T8 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRAV9-1A0A075B6T8 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRAV9-1A0A075B6T8 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRAV9-1A0A075B6T8 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TRAV9-1A0A075B6T8 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
TRAV9-1A0A075B6T8 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TRAV9-1A0A075B6T8 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC21.57■■□□□ 1.04
TRAV9-1A0A075B6T8 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TRAV9-1A0A075B6T8 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRAV9-1A0A075B6T8 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRAV9-1A0A075B6T8 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRAV9-1A0A075B6T8 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRAV9-1A0A075B6T8 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRAV9-1A0A075B6T8 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRAV9-1A0A075B6T8 AC145285.7-201ENST00000614819 1539 ntBASIC21.54■■□□□ 1.04
TRAV9-1A0A075B6T8 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TRAV9-1A0A075B6T8 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRAV9-1A0A075B6T8 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC21.5■■□□□ 1.03
TRAV9-1A0A075B6T8 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRAV9-1A0A075B6T8 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRAV9-1A0A075B6T8 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRAV9-1A0A075B6T8 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRAV9-1A0A075B6T8 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRAV9-1A0A075B6T8 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TRAV9-1A0A075B6T8 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRAV9-1A0A075B6T8 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRAV9-1A0A075B6T8 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TRAV9-1A0A075B6T8 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
TRAV9-1A0A075B6T8 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC21.4■■□□□ 1.02
TRAV9-1A0A075B6T8 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
TRAV9-1A0A075B6T8 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
TRAV9-1A0A075B6T8 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TRAV9-1A0A075B6T8 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRAV9-1A0A075B6T8 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TRAV9-1A0A075B6T8 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRAV9-1A0A075B6T8 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRAV9-1A0A075B6T8 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC21.32■■□□□ 1
TRAV9-1A0A075B6T8 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
TRAV9-1A0A075B6T8 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRAV9-1A0A075B6T8 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC21.3■■□□□ 1
TRAV9-1A0A075B6T8 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRAV9-1A0A075B6T8 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
TRAV9-1A0A075B6T8 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRAV9-1A0A075B6T8 ABCB10P3-201ENST00000561950 2166 ntBASIC21.29■■□□□ 1
TRAV9-1A0A075B6T8 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRAV9-1A0A075B6T8 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRAV9-1A0A075B6T8 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRAV9-1A0A075B6T8 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TRAV9-1A0A075B6T8 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TRAV9-1A0A075B6T8 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRAV9-1A0A075B6T8 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRAV9-1A0A075B6T8 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TRAV9-1A0A075B6T8 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRAV9-1A0A075B6T8 ABCB10P1-201ENST00000614297 2181 ntBASIC21.23■□□□□ 0.99
TRAV9-1A0A075B6T8 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC21.22■□□□□ 0.99
TRAV9-1A0A075B6T8 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
TRAV9-1A0A075B6T8 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRAV9-1A0A075B6T8 AC139426.1-201ENST00000568218 2529 ntBASIC21.19■□□□□ 0.98
TRAV9-1A0A075B6T8 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 7.9 ms