Protein–RNA interactions for Protein: Q9Y5U2

TSSC4, Protein TSSC4, humanhuman

Predicted RBP Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4Q9Y5U2 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC12.59□□□□□ -0.39
TSSC4Q9Y5U2 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TSSC4Q9Y5U2 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
TSSC4Q9Y5U2 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC12.59□□□□□ -0.39
TSSC4Q9Y5U2 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TSSC4Q9Y5U2 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC12.59□□□□□ -0.39
TSSC4Q9Y5U2 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TSSC4Q9Y5U2 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TSSC4Q9Y5U2 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC12.59□□□□□ -0.39
TSSC4Q9Y5U2 ZNF890P-202ENST00000530367 1156 ntBASIC12.59□□□□□ -0.39
TSSC4Q9Y5U2 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC12.59□□□□□ -0.39
TSSC4Q9Y5U2 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC12.59□□□□□ -0.39
TSSC4Q9Y5U2 AL844908.2-201ENST00000609461 460 ntBASIC12.59□□□□□ -0.39
TSSC4Q9Y5U2 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TSSC4Q9Y5U2 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TSSC4Q9Y5U2 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC12.59□□□□□ -0.39
TSSC4Q9Y5U2 AC126755.1-201ENST00000525846 6405 ntBASIC12.59□□□□□ -0.39
TSSC4Q9Y5U2 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC12.59□□□□□ -0.39
TSSC4Q9Y5U2 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC12.59□□□□□ -0.39
TSSC4Q9Y5U2 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TSSC4Q9Y5U2 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TSSC4Q9Y5U2 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TSSC4Q9Y5U2 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
TSSC4Q9Y5U2 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC12.59□□□□□ -0.39
TSSC4Q9Y5U2 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TSSC4Q9Y5U2 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TSSC4Q9Y5U2 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC12.59□□□□□ -0.39
TSSC4Q9Y5U2 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
TSSC4Q9Y5U2 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
TSSC4Q9Y5U2 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
TSSC4Q9Y5U2 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC12.58□□□□□ -0.39
TSSC4Q9Y5U2 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
TSSC4Q9Y5U2 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
TSSC4Q9Y5U2 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC12.58□□□□□ -0.4
TSSC4Q9Y5U2 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TSSC4Q9Y5U2 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC12.58□□□□□ -0.4
TSSC4Q9Y5U2 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TSSC4Q9Y5U2 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TSSC4Q9Y5U2 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TSSC4Q9Y5U2 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC12.58□□□□□ -0.4
TSSC4Q9Y5U2 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TSSC4Q9Y5U2 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
TSSC4Q9Y5U2 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TSSC4Q9Y5U2 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
TSSC4Q9Y5U2 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TSSC4Q9Y5U2 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TSSC4Q9Y5U2 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC12.58□□□□□ -0.4
TSSC4Q9Y5U2 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TSSC4Q9Y5U2 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TSSC4Q9Y5U2 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TSSC4Q9Y5U2 CALY-202ENST00000368555 783 ntTSL 2 BASIC12.58□□□□□ -0.4
TSSC4Q9Y5U2 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TSSC4Q9Y5U2 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC12.58□□□□□ -0.4
TSSC4Q9Y5U2 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
TSSC4Q9Y5U2 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TSSC4Q9Y5U2 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
TSSC4Q9Y5U2 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC12.58□□□□□ -0.4
TSSC4Q9Y5U2 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TSSC4Q9Y5U2 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC12.58□□□□□ -0.4
TSSC4Q9Y5U2 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TSSC4Q9Y5U2 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TSSC4Q9Y5U2 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC12.58□□□□□ -0.4
TSSC4Q9Y5U2 WBP2-203ENST00000433525 928 ntTSL 2 BASIC12.58□□□□□ -0.4
TSSC4Q9Y5U2 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
TSSC4Q9Y5U2 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
TSSC4Q9Y5U2 SPTLC1P1-201ENST00000447199 261 ntBASIC12.58□□□□□ -0.4
TSSC4Q9Y5U2 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC12.58□□□□□ -0.4
TSSC4Q9Y5U2 AC135586.1-201ENST00000539323 574 ntBASIC12.58□□□□□ -0.4
TSSC4Q9Y5U2 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
TSSC4Q9Y5U2 AL662799.1-202ENST00000614205 422 ntBASIC12.58□□□□□ -0.4
TSSC4Q9Y5U2 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC12.58□□□□□ -0.4
TSSC4Q9Y5U2 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC12.58□□□□□ -0.4
TSSC4Q9Y5U2 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
TSSC4Q9Y5U2 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TSSC4Q9Y5U2 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TSSC4Q9Y5U2 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TSSC4Q9Y5U2 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
TSSC4Q9Y5U2 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
TSSC4Q9Y5U2 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC12.58□□□□□ -0.4
TSSC4Q9Y5U2 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TSSC4Q9Y5U2 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TSSC4Q9Y5U2 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TSSC4Q9Y5U2 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
TSSC4Q9Y5U2 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC12.58□□□□□ -0.4
TSSC4Q9Y5U2 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC12.58□□□□□ -0.4
TSSC4Q9Y5U2 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
TSSC4Q9Y5U2 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TSSC4Q9Y5U2 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC12.57□□□□□ -0.4
TSSC4Q9Y5U2 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC12.57□□□□□ -0.4
TSSC4Q9Y5U2 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TSSC4Q9Y5U2 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC12.57□□□□□ -0.4
TSSC4Q9Y5U2 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC12.57□□□□□ -0.4
TSSC4Q9Y5U2 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
TSSC4Q9Y5U2 CASK-202ENST00000378158 3848 ntTSL 5 BASIC12.57□□□□□ -0.4
TSSC4Q9Y5U2 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TSSC4Q9Y5U2 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC12.57□□□□□ -0.4
TSSC4Q9Y5U2 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
TSSC4Q9Y5U2 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC12.57□□□□□ -0.4
TSSC4Q9Y5U2 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
TSSC4Q9Y5U2 AC005622.1-201ENST00000636801 1703 ntBASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms