Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
RAI2Q9Y5P3 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
RAI2Q9Y5P3 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RAI2Q9Y5P3 AL080243.2-201ENST00000418783 582 ntBASIC16.17■□□□□ 0.18
RAI2Q9Y5P3 AC092580.3-201ENST00000430932 139 ntBASIC16.17■□□□□ 0.18
RAI2Q9Y5P3 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.17■□□□□ 0.18
RAI2Q9Y5P3 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.17■□□□□ 0.18
RAI2Q9Y5P3 AC027369.6-201ENST00000525520 931 ntBASIC16.17■□□□□ 0.18
RAI2Q9Y5P3 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.17■□□□□ 0.18
RAI2Q9Y5P3 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
RAI2Q9Y5P3 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
RAI2Q9Y5P3 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.17■□□□□ 0.18
RAI2Q9Y5P3 MIR6799-201ENST00000620297 69 ntBASIC16.17■□□□□ 0.18
RAI2Q9Y5P3 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
RAI2Q9Y5P3 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAI2Q9Y5P3 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAI2Q9Y5P3 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAI2Q9Y5P3 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAI2Q9Y5P3 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAI2Q9Y5P3 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
RAI2Q9Y5P3 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAI2Q9Y5P3 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.17■□□□□ 0.18
RAI2Q9Y5P3 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAI2Q9Y5P3 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAI2Q9Y5P3 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RAI2Q9Y5P3 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.17■□□□□ 0.18
RAI2Q9Y5P3 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAI2Q9Y5P3 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RAI2Q9Y5P3 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
RAI2Q9Y5P3 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.17■□□□□ 0.18
RAI2Q9Y5P3 REXO1L1P-202ENST00000608646 1974 ntBASIC16.17■□□□□ 0.18
RAI2Q9Y5P3 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAI2Q9Y5P3 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.16■□□□□ 0.18
RAI2Q9Y5P3 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RAI2Q9Y5P3 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.16■□□□□ 0.18
RAI2Q9Y5P3 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAI2Q9Y5P3 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
RAI2Q9Y5P3 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAI2Q9Y5P3 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RAI2Q9Y5P3 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAI2Q9Y5P3 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAI2Q9Y5P3 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.16■□□□□ 0.18
RAI2Q9Y5P3 AL365203.3-201ENST00000609742 2057 ntBASIC16.16■□□□□ 0.18
RAI2Q9Y5P3 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.16■□□□□ 0.18
RAI2Q9Y5P3 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAI2Q9Y5P3 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAI2Q9Y5P3 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
RAI2Q9Y5P3 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.16■□□□□ 0.18
RAI2Q9Y5P3 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RAI2Q9Y5P3 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RAI2Q9Y5P3 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RAI2Q9Y5P3 EEF1DP4-201ENST00000446006 880 ntBASIC16.16■□□□□ 0.18
RAI2Q9Y5P3 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC16.16■□□□□ 0.18
RAI2Q9Y5P3 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.16■□□□□ 0.18
RAI2Q9Y5P3 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.16■□□□□ 0.18
RAI2Q9Y5P3 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16.16■□□□□ 0.18
RAI2Q9Y5P3 IGHV3-42-201ENST00000520410 361 ntBASIC16.16■□□□□ 0.18
RAI2Q9Y5P3 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
RAI2Q9Y5P3 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RAI2Q9Y5P3 AL358472.5-202ENST00000641448 1267 ntBASIC16.16■□□□□ 0.18
RAI2Q9Y5P3 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RAI2Q9Y5P3 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
RAI2Q9Y5P3 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAI2Q9Y5P3 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RAI2Q9Y5P3 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
RAI2Q9Y5P3 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RAI2Q9Y5P3 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.16■□□□□ 0.18
RAI2Q9Y5P3 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.16■□□□□ 0.18
RAI2Q9Y5P3 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RAI2Q9Y5P3 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAI2Q9Y5P3 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAI2Q9Y5P3 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAI2Q9Y5P3 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.15■□□□□ 0.18
RAI2Q9Y5P3 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.15■□□□□ 0.18
RAI2Q9Y5P3 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RAI2Q9Y5P3 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAI2Q9Y5P3 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.15■□□□□ 0.18
RAI2Q9Y5P3 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAI2Q9Y5P3 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.15■□□□□ 0.18
RAI2Q9Y5P3 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RAI2Q9Y5P3 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RAI2Q9Y5P3 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAI2Q9Y5P3 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.15■□□□□ 0.18
RAI2Q9Y5P3 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAI2Q9Y5P3 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAI2Q9Y5P3 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAI2Q9Y5P3 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RAI2Q9Y5P3 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.15■□□□□ 0.18
RAI2Q9Y5P3 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.15■□□□□ 0.18
RAI2Q9Y5P3 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.15■□□□□ 0.18
RAI2Q9Y5P3 NME2P1-201ENST00000426182 414 ntBASIC16.15■□□□□ 0.18
RAI2Q9Y5P3 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RAI2Q9Y5P3 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.15■□□□□ 0.18
RAI2Q9Y5P3 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.15■□□□□ 0.18
RAI2Q9Y5P3 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
RAI2Q9Y5P3 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.15■□□□□ 0.18
RAI2Q9Y5P3 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
RAI2Q9Y5P3 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RAI2Q9Y5P3 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC16.15■□□□□ 0.18
RAI2Q9Y5P3 TEX28P1-201ENST00000613479 1221 ntBASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms