Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
R3HCC1Q9Y3T6 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
R3HCC1Q9Y3T6 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
R3HCC1Q9Y3T6 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
R3HCC1Q9Y3T6 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
R3HCC1Q9Y3T6 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
R3HCC1Q9Y3T6 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
R3HCC1Q9Y3T6 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC18.42■□□□□ 0.54
R3HCC1Q9Y3T6 PRSS29P-201ENST00000440800 595 ntBASIC18.42■□□□□ 0.54
R3HCC1Q9Y3T6 AC009947.1-201ENST00000444350 727 ntBASIC18.42■□□□□ 0.54
R3HCC1Q9Y3T6 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
R3HCC1Q9Y3T6 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.42■□□□□ 0.54
R3HCC1Q9Y3T6 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.42■□□□□ 0.54
R3HCC1Q9Y3T6 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.42■□□□□ 0.54
R3HCC1Q9Y3T6 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC18.42■□□□□ 0.54
R3HCC1Q9Y3T6 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18.42■□□□□ 0.54
R3HCC1Q9Y3T6 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18.42■□□□□ 0.54
R3HCC1Q9Y3T6 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.42■□□□□ 0.54
R3HCC1Q9Y3T6 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
R3HCC1Q9Y3T6 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
R3HCC1Q9Y3T6 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
R3HCC1Q9Y3T6 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
R3HCC1Q9Y3T6 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
R3HCC1Q9Y3T6 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
R3HCC1Q9Y3T6 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
R3HCC1Q9Y3T6 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.42■□□□□ 0.54
R3HCC1Q9Y3T6 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
R3HCC1Q9Y3T6 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC18.42■□□□□ 0.54
R3HCC1Q9Y3T6 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
R3HCC1Q9Y3T6 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC18.42■□□□□ 0.54
R3HCC1Q9Y3T6 AL137784.3-201ENST00000623858 2288 ntBASIC18.42■□□□□ 0.54
R3HCC1Q9Y3T6 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
R3HCC1Q9Y3T6 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
R3HCC1Q9Y3T6 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
R3HCC1Q9Y3T6 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
R3HCC1Q9Y3T6 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC18.41■□□□□ 0.54
R3HCC1Q9Y3T6 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
R3HCC1Q9Y3T6 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
R3HCC1Q9Y3T6 AC007191.1-201ENST00000623179 2995 ntBASIC18.41■□□□□ 0.54
R3HCC1Q9Y3T6 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
R3HCC1Q9Y3T6 SSR4P1-203ENST00000599569 2260 ntBASIC18.41■□□□□ 0.54
R3HCC1Q9Y3T6 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC18.41■□□□□ 0.54
R3HCC1Q9Y3T6 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
R3HCC1Q9Y3T6 TK2-221ENST00000620035 5060 ntTSL 2 BASIC18.41■□□□□ 0.54
R3HCC1Q9Y3T6 BEX3-201ENST00000361298 921 ntTSL 2 BASIC18.41■□□□□ 0.54
R3HCC1Q9Y3T6 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
R3HCC1Q9Y3T6 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
R3HCC1Q9Y3T6 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
R3HCC1Q9Y3T6 MIR940-201ENST00000401276 94 ntBASIC18.41■□□□□ 0.54
R3HCC1Q9Y3T6 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
R3HCC1Q9Y3T6 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.41■□□□□ 0.54
R3HCC1Q9Y3T6 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
R3HCC1Q9Y3T6 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.41■□□□□ 0.54
R3HCC1Q9Y3T6 SLC25A1P1-201ENST00000528351 927 ntBASIC18.41■□□□□ 0.54
R3HCC1Q9Y3T6 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
R3HCC1Q9Y3T6 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.41■□□□□ 0.54
R3HCC1Q9Y3T6 AC027601.4-201ENST00000611259 610 ntBASIC18.41■□□□□ 0.54
R3HCC1Q9Y3T6 AC010654.1-201ENST00000615722 808 ntBASIC18.41■□□□□ 0.54
R3HCC1Q9Y3T6 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
R3HCC1Q9Y3T6 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
R3HCC1Q9Y3T6 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
R3HCC1Q9Y3T6 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC18.41■□□□□ 0.54
R3HCC1Q9Y3T6 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
R3HCC1Q9Y3T6 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
R3HCC1Q9Y3T6 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
R3HCC1Q9Y3T6 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
R3HCC1Q9Y3T6 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
R3HCC1Q9Y3T6 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
R3HCC1Q9Y3T6 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
R3HCC1Q9Y3T6 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.41■□□□□ 0.54
R3HCC1Q9Y3T6 AL021920.2-201ENST00000624828 1351 ntBASIC18.41■□□□□ 0.54
R3HCC1Q9Y3T6 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC18.41■□□□□ 0.54
R3HCC1Q9Y3T6 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC18.41■□□□□ 0.54
R3HCC1Q9Y3T6 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC18.41■□□□□ 0.54
R3HCC1Q9Y3T6 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.41■□□□□ 0.54
R3HCC1Q9Y3T6 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
R3HCC1Q9Y3T6 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
R3HCC1Q9Y3T6 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
R3HCC1Q9Y3T6 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
R3HCC1Q9Y3T6 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
R3HCC1Q9Y3T6 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
R3HCC1Q9Y3T6 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
R3HCC1Q9Y3T6 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
R3HCC1Q9Y3T6 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
R3HCC1Q9Y3T6 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
R3HCC1Q9Y3T6 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
R3HCC1Q9Y3T6 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.4■□□□□ 0.54
R3HCC1Q9Y3T6 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
R3HCC1Q9Y3T6 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18.4■□□□□ 0.54
R3HCC1Q9Y3T6 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
R3HCC1Q9Y3T6 AL591424.1-201ENST00000442569 1213 ntBASIC18.4■□□□□ 0.54
R3HCC1Q9Y3T6 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
R3HCC1Q9Y3T6 RNA5SP416-201ENST00000516838 111 ntBASIC18.4■□□□□ 0.54
R3HCC1Q9Y3T6 KRT18P58-201ENST00000527480 1120 ntBASIC18.4■□□□□ 0.54
R3HCC1Q9Y3T6 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.4■□□□□ 0.54
R3HCC1Q9Y3T6 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.4■□□□□ 0.54
R3HCC1Q9Y3T6 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.4■□□□□ 0.54
R3HCC1Q9Y3T6 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.4■□□□□ 0.54
R3HCC1Q9Y3T6 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
R3HCC1Q9Y3T6 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms