Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC19.15■□□□□ 0.66
ZC3H4Q9UPT8 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZC3H4Q9UPT8 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC19.15■□□□□ 0.66
ZC3H4Q9UPT8 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC19.15■□□□□ 0.66
ZC3H4Q9UPT8 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC19.15■□□□□ 0.66
ZC3H4Q9UPT8 AC016700.1-201ENST00000429424 312 ntBASIC19.15■□□□□ 0.66
ZC3H4Q9UPT8 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC19.15■□□□□ 0.66
ZC3H4Q9UPT8 KRT18P25-201ENST00000508931 1278 ntBASIC19.15■□□□□ 0.66
ZC3H4Q9UPT8 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC19.15■□□□□ 0.66
ZC3H4Q9UPT8 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZC3H4Q9UPT8 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC19.15■□□□□ 0.66
ZC3H4Q9UPT8 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC19.15■□□□□ 0.66
ZC3H4Q9UPT8 AP005019.2-201ENST00000615104 511 ntBASIC19.15■□□□□ 0.66
ZC3H4Q9UPT8 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC19.15■□□□□ 0.66
ZC3H4Q9UPT8 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC19.15■□□□□ 0.66
ZC3H4Q9UPT8 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZC3H4Q9UPT8 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ZC3H4Q9UPT8 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
ZC3H4Q9UPT8 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ZC3H4Q9UPT8 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ZC3H4Q9UPT8 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
ZC3H4Q9UPT8 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
ZC3H4Q9UPT8 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC19.14■□□□□ 0.66
ZC3H4Q9UPT8 AC018695.7-201ENST00000624587 2492 ntBASIC19.14■□□□□ 0.66
ZC3H4Q9UPT8 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
ZC3H4Q9UPT8 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
ZC3H4Q9UPT8 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
ZC3H4Q9UPT8 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC19.14■□□□□ 0.66
ZC3H4Q9UPT8 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC19.14■□□□□ 0.66
ZC3H4Q9UPT8 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
ZC3H4Q9UPT8 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
ZC3H4Q9UPT8 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZC3H4Q9UPT8 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC19.14■□□□□ 0.65
ZC3H4Q9UPT8 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZC3H4Q9UPT8 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZC3H4Q9UPT8 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC19.14■□□□□ 0.65
ZC3H4Q9UPT8 AL355334.1-201ENST00000417713 215 ntBASIC19.14■□□□□ 0.65
ZC3H4Q9UPT8 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC19.14■□□□□ 0.65
ZC3H4Q9UPT8 SUPT4H1P2-201ENST00000501248 353 ntBASIC19.14■□□□□ 0.65
ZC3H4Q9UPT8 COX5BP1-201ENST00000507622 393 ntBASIC19.14■□□□□ 0.65
ZC3H4Q9UPT8 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
ZC3H4Q9UPT8 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC19.14■□□□□ 0.65
ZC3H4Q9UPT8 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC19.14■□□□□ 0.65
ZC3H4Q9UPT8 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC19.14■□□□□ 0.65
ZC3H4Q9UPT8 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZC3H4Q9UPT8 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZC3H4Q9UPT8 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC19.14■□□□□ 0.65
ZC3H4Q9UPT8 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC19.13■□□□□ 0.65
ZC3H4Q9UPT8 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZC3H4Q9UPT8 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
ZC3H4Q9UPT8 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZC3H4Q9UPT8 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
ZC3H4Q9UPT8 AL391256.1-201ENST00000443260 1855 ntBASIC19.13■□□□□ 0.65
ZC3H4Q9UPT8 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC19.13■□□□□ 0.65
ZC3H4Q9UPT8 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZC3H4Q9UPT8 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ZC3H4Q9UPT8 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ZC3H4Q9UPT8 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC19.13■□□□□ 0.65
ZC3H4Q9UPT8 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC19.13■□□□□ 0.65
ZC3H4Q9UPT8 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZC3H4Q9UPT8 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZC3H4Q9UPT8 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ZC3H4Q9UPT8 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ZC3H4Q9UPT8 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZC3H4Q9UPT8 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZC3H4Q9UPT8 CYP46A4P-201ENST00000414953 267 ntBASIC19.13■□□□□ 0.65
ZC3H4Q9UPT8 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC19.13■□□□□ 0.65
ZC3H4Q9UPT8 FTLP10-202ENST00000505798 471 ntBASIC19.13■□□□□ 0.65
ZC3H4Q9UPT8 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC19.13■□□□□ 0.65
ZC3H4Q9UPT8 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC19.13■□□□□ 0.65
ZC3H4Q9UPT8 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC19.13■□□□□ 0.65
ZC3H4Q9UPT8 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC19.13■□□□□ 0.65
ZC3H4Q9UPT8 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ZC3H4Q9UPT8 AL118508.1-201ENST00000613502 2345 ntBASIC19.13■□□□□ 0.65
ZC3H4Q9UPT8 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ZC3H4Q9UPT8 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZC3H4Q9UPT8 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ZC3H4Q9UPT8 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ZC3H4Q9UPT8 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ZC3H4Q9UPT8 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ZC3H4Q9UPT8 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZC3H4Q9UPT8 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZC3H4Q9UPT8 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZC3H4Q9UPT8 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZC3H4Q9UPT8 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZC3H4Q9UPT8 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZC3H4Q9UPT8 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC19.12■□□□□ 0.65
ZC3H4Q9UPT8 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZC3H4Q9UPT8 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ZC3H4Q9UPT8 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
ZC3H4Q9UPT8 MIR1202-201ENST00000408529 83 ntBASIC19.12■□□□□ 0.65
ZC3H4Q9UPT8 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC19.12■□□□□ 0.65
ZC3H4Q9UPT8 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC19.12■□□□□ 0.65
ZC3H4Q9UPT8 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC19.12■□□□□ 0.65
ZC3H4Q9UPT8 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ZC3H4Q9UPT8 AC026740.1-201ENST00000607068 791 ntBASIC19.12■□□□□ 0.65
ZC3H4Q9UPT8 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZC3H4Q9UPT8 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ZC3H4Q9UPT8 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC19.12■□□□□ 0.65
ZC3H4Q9UPT8 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms