Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NPC1L1Q9UHC9 RERG-209ENST00000546331 1383 ntTSL 2 BASIC21.21■□□□□ 0.99
NPC1L1Q9UHC9 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
NPC1L1Q9UHC9 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
NPC1L1Q9UHC9 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NPC1L1Q9UHC9 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC21.21■□□□□ 0.99
NPC1L1Q9UHC9 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC21.21■□□□□ 0.99
NPC1L1Q9UHC9 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
NPC1L1Q9UHC9 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC21.21■□□□□ 0.99
NPC1L1Q9UHC9 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
NPC1L1Q9UHC9 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NPC1L1Q9UHC9 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC21.21■□□□□ 0.99
NPC1L1Q9UHC9 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
NPC1L1Q9UHC9 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC21.21■□□□□ 0.99
NPC1L1Q9UHC9 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NPC1L1Q9UHC9 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NPC1L1Q9UHC9 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NPC1L1Q9UHC9 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
NPC1L1Q9UHC9 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC21.21■□□□□ 0.99
NPC1L1Q9UHC9 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NPC1L1Q9UHC9 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
NPC1L1Q9UHC9 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC21.21■□□□□ 0.99
NPC1L1Q9UHC9 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC21.21■□□□□ 0.99
NPC1L1Q9UHC9 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC21.21■□□□□ 0.99
NPC1L1Q9UHC9 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC21.21■□□□□ 0.99
NPC1L1Q9UHC9 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC21.21■□□□□ 0.99
NPC1L1Q9UHC9 AL049840.4-201ENST00000602422 811 ntBASIC21.21■□□□□ 0.99
NPC1L1Q9UHC9 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC21.21■□□□□ 0.99
NPC1L1Q9UHC9 AC025048.6-201ENST00000634326 1161 ntBASIC21.21■□□□□ 0.99
NPC1L1Q9UHC9 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC21.21■□□□□ 0.99
NPC1L1Q9UHC9 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
NPC1L1Q9UHC9 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
NPC1L1Q9UHC9 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
NPC1L1Q9UHC9 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NPC1L1Q9UHC9 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NPC1L1Q9UHC9 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC21.2■□□□□ 0.98
NPC1L1Q9UHC9 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
NPC1L1Q9UHC9 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
NPC1L1Q9UHC9 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
NPC1L1Q9UHC9 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC21.2■□□□□ 0.98
NPC1L1Q9UHC9 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC21.2■□□□□ 0.98
NPC1L1Q9UHC9 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC21.2■□□□□ 0.98
NPC1L1Q9UHC9 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC21.2■□□□□ 0.98
NPC1L1Q9UHC9 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NPC1L1Q9UHC9 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
NPC1L1Q9UHC9 TMBIM7P-203ENST00000641617 1718 ntBASIC21.2■□□□□ 0.98
NPC1L1Q9UHC9 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
NPC1L1Q9UHC9 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NPC1L1Q9UHC9 DRD5P1-201ENST00000456605 1438 ntBASIC21.2■□□□□ 0.98
NPC1L1Q9UHC9 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
NPC1L1Q9UHC9 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NPC1L1Q9UHC9 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NPC1L1Q9UHC9 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NPC1L1Q9UHC9 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NPC1L1Q9UHC9 MPV17-208ENST00000405076 603 ntTSL 5 BASIC21.2■□□□□ 0.98
NPC1L1Q9UHC9 WBP2-203ENST00000433525 928 ntTSL 2 BASIC21.2■□□□□ 0.98
NPC1L1Q9UHC9 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC21.2■□□□□ 0.98
NPC1L1Q9UHC9 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC21.2■□□□□ 0.98
NPC1L1Q9UHC9 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC21.2■□□□□ 0.98
NPC1L1Q9UHC9 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
NPC1L1Q9UHC9 AC025181.2-201ENST00000606994 802 ntBASIC21.2■□□□□ 0.98
NPC1L1Q9UHC9 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC21.2■□□□□ 0.98
NPC1L1Q9UHC9 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NPC1L1Q9UHC9 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NPC1L1Q9UHC9 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC21.19■□□□□ 0.98
NPC1L1Q9UHC9 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
NPC1L1Q9UHC9 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
NPC1L1Q9UHC9 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
NPC1L1Q9UHC9 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
NPC1L1Q9UHC9 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NPC1L1Q9UHC9 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
NPC1L1Q9UHC9 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC21.19■□□□□ 0.98
NPC1L1Q9UHC9 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NPC1L1Q9UHC9 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC21.19■□□□□ 0.98
NPC1L1Q9UHC9 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC21.19■□□□□ 0.98
NPC1L1Q9UHC9 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NPC1L1Q9UHC9 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
NPC1L1Q9UHC9 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NPC1L1Q9UHC9 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
NPC1L1Q9UHC9 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NPC1L1Q9UHC9 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NPC1L1Q9UHC9 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NPC1L1Q9UHC9 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NPC1L1Q9UHC9 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NPC1L1Q9UHC9 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NPC1L1Q9UHC9 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NPC1L1Q9UHC9 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NPC1L1Q9UHC9 SUN1-204ENST00000403868 978 ntTSL 2 BASIC21.19■□□□□ 0.98
NPC1L1Q9UHC9 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC21.19■□□□□ 0.98
NPC1L1Q9UHC9 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC21.19■□□□□ 0.98
NPC1L1Q9UHC9 AC008494.3-201ENST00000606615 944 ntBASIC21.19■□□□□ 0.98
NPC1L1Q9UHC9 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC21.19■□□□□ 0.98
NPC1L1Q9UHC9 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NPC1L1Q9UHC9 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NPC1L1Q9UHC9 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
NPC1L1Q9UHC9 HNRNPA1P48-201ENST00000562726 1377 ntBASIC21.19■□□□□ 0.98
NPC1L1Q9UHC9 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
NPC1L1Q9UHC9 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
NPC1L1Q9UHC9 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC21.19■□□□□ 0.98
NPC1L1Q9UHC9 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms