Protein–RNA interactions for Protein: Q9NZC2

TREM2, Triggering receptor expressed on myeloid cells 2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2Q9NZC2 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
TREM2Q9NZC2 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TREM2Q9NZC2 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TREM2Q9NZC2 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC13.9□□□□□ -0.18
TREM2Q9NZC2 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC13.9□□□□□ -0.18
TREM2Q9NZC2 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TREM2Q9NZC2 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC13.9□□□□□ -0.18
TREM2Q9NZC2 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
TREM2Q9NZC2 GPS2P2-201ENST00000430745 888 ntBASIC13.9□□□□□ -0.18
TREM2Q9NZC2 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC13.9□□□□□ -0.18
TREM2Q9NZC2 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC13.9□□□□□ -0.18
TREM2Q9NZC2 CNN2P2-201ENST00000443536 909 ntBASIC13.9□□□□□ -0.18
TREM2Q9NZC2 CNN2P3-201ENST00000450201 906 ntBASIC13.9□□□□□ -0.18
TREM2Q9NZC2 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC13.9□□□□□ -0.18
TREM2Q9NZC2 AC067863.1-201ENST00000494933 530 ntBASIC13.9□□□□□ -0.18
TREM2Q9NZC2 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC13.9□□□□□ -0.18
TREM2Q9NZC2 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC13.9□□□□□ -0.18
TREM2Q9NZC2 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TREM2Q9NZC2 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC13.9□□□□□ -0.18
TREM2Q9NZC2 AL136317.3-201ENST00000618497 906 ntBASIC13.9□□□□□ -0.18
TREM2Q9NZC2 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TREM2Q9NZC2 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC13.9□□□□□ -0.18
TREM2Q9NZC2 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TREM2Q9NZC2 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC13.9□□□□□ -0.18
TREM2Q9NZC2 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TREM2Q9NZC2 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
TREM2Q9NZC2 CICP13-201ENST00000422015 2789 ntBASIC13.9□□□□□ -0.18
TREM2Q9NZC2 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TREM2Q9NZC2 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TREM2Q9NZC2 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TREM2Q9NZC2 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TREM2Q9NZC2 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
TREM2Q9NZC2 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
TREM2Q9NZC2 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC13.9□□□□□ -0.19
TREM2Q9NZC2 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
TREM2Q9NZC2 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
TREM2Q9NZC2 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.19
TREM2Q9NZC2 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
TREM2Q9NZC2 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TREM2Q9NZC2 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TREM2Q9NZC2 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TREM2Q9NZC2 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TREM2Q9NZC2 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TREM2Q9NZC2 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TREM2Q9NZC2 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TREM2Q9NZC2 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TREM2Q9NZC2 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
TREM2Q9NZC2 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TREM2Q9NZC2 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
TREM2Q9NZC2 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TREM2Q9NZC2 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TREM2Q9NZC2 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TREM2Q9NZC2 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TREM2Q9NZC2 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TREM2Q9NZC2 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TREM2Q9NZC2 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
TREM2Q9NZC2 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC13.89□□□□□ -0.19
TREM2Q9NZC2 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
TREM2Q9NZC2 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC13.89□□□□□ -0.19
TREM2Q9NZC2 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TREM2Q9NZC2 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TREM2Q9NZC2 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TREM2Q9NZC2 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC13.89□□□□□ -0.19
TREM2Q9NZC2 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC13.89□□□□□ -0.19
TREM2Q9NZC2 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC13.89□□□□□ -0.19
TREM2Q9NZC2 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC13.89□□□□□ -0.19
TREM2Q9NZC2 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC13.89□□□□□ -0.19
TREM2Q9NZC2 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC13.89□□□□□ -0.19
TREM2Q9NZC2 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC13.89□□□□□ -0.19
TREM2Q9NZC2 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC13.89□□□□□ -0.19
TREM2Q9NZC2 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC13.89□□□□□ -0.19
TREM2Q9NZC2 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TREM2Q9NZC2 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
TREM2Q9NZC2 QPRT-203ENST00000562473 579 ntTSL 3 BASIC13.89□□□□□ -0.19
TREM2Q9NZC2 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
TREM2Q9NZC2 AC026150.2-201ENST00000564693 1156 ntBASIC13.89□□□□□ -0.19
TREM2Q9NZC2 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
TREM2Q9NZC2 MIR3197-201ENST00000582241 73 ntBASIC13.89□□□□□ -0.19
TREM2Q9NZC2 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TREM2Q9NZC2 AC005498.2-205ENST00000593218 784 ntBASIC13.89□□□□□ -0.19
TREM2Q9NZC2 AP001059.3-201ENST00000619053 235 ntBASIC13.89□□□□□ -0.19
TREM2Q9NZC2 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
TREM2Q9NZC2 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC13.89□□□□□ -0.19
TREM2Q9NZC2 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TREM2Q9NZC2 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC13.89□□□□□ -0.19
TREM2Q9NZC2 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TREM2Q9NZC2 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
TREM2Q9NZC2 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TREM2Q9NZC2 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
TREM2Q9NZC2 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
TREM2Q9NZC2 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TREM2Q9NZC2 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TREM2Q9NZC2 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TREM2Q9NZC2 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TREM2Q9NZC2 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
TREM2Q9NZC2 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TREM2Q9NZC2 TUBB3P1-201ENST00000405796 1332 ntBASIC13.89□□□□□ -0.19
TREM2Q9NZC2 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC13.89□□□□□ -0.19
TREM2Q9NZC2 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TREM2Q9NZC2 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms