Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
THUMPD1Q9NXG2 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
THUMPD1Q9NXG2 PDPK2P-202ENST00000562415 1191 ntBASIC15.1■□□□□ 0.01
THUMPD1Q9NXG2 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.1■□□□□ 0.01
THUMPD1Q9NXG2 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
THUMPD1Q9NXG2 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.1■□□□□ 0.01
THUMPD1Q9NXG2 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
THUMPD1Q9NXG2 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
THUMPD1Q9NXG2 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
THUMPD1Q9NXG2 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.1■□□□□ 0.01
THUMPD1Q9NXG2 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
THUMPD1Q9NXG2 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
THUMPD1Q9NXG2 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
THUMPD1Q9NXG2 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
THUMPD1Q9NXG2 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
THUMPD1Q9NXG2 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.1■□□□□ 0.01
THUMPD1Q9NXG2 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
THUMPD1Q9NXG2 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.1■□□□□ 0.01
THUMPD1Q9NXG2 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
THUMPD1Q9NXG2 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
THUMPD1Q9NXG2 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
THUMPD1Q9NXG2 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
THUMPD1Q9NXG2 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
THUMPD1Q9NXG2 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
THUMPD1Q9NXG2 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
THUMPD1Q9NXG2 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
THUMPD1Q9NXG2 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.1■□□□□ 0.01
THUMPD1Q9NXG2 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
THUMPD1Q9NXG2 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.09■□□□□ 0.01
THUMPD1Q9NXG2 AC104109.2-201ENST00000602919 1418 ntBASIC15.09■□□□□ 0.01
THUMPD1Q9NXG2 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
THUMPD1Q9NXG2 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
THUMPD1Q9NXG2 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.09■□□□□ 0.01
THUMPD1Q9NXG2 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
THUMPD1Q9NXG2 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
THUMPD1Q9NXG2 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.09■□□□□ 0.01
THUMPD1Q9NXG2 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
THUMPD1Q9NXG2 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
THUMPD1Q9NXG2 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
THUMPD1Q9NXG2 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
THUMPD1Q9NXG2 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
THUMPD1Q9NXG2 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.09■□□□□ 0.01
THUMPD1Q9NXG2 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
THUMPD1Q9NXG2 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.09■□□□□ 0.01
THUMPD1Q9NXG2 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
THUMPD1Q9NXG2 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
THUMPD1Q9NXG2 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
THUMPD1Q9NXG2 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
THUMPD1Q9NXG2 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.09■□□□□ 0.01
THUMPD1Q9NXG2 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.09■□□□□ 0.01
THUMPD1Q9NXG2 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC15.09■□□□□ 0.01
THUMPD1Q9NXG2 AC034105.1-201ENST00000563488 319 ntBASIC15.09■□□□□ 0.01
THUMPD1Q9NXG2 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.09■□□□□ 0.01
THUMPD1Q9NXG2 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.09■□□□□ 0.01
THUMPD1Q9NXG2 AC073389.1-201ENST00000595595 795 ntBASIC15.09■□□□□ 0.01
THUMPD1Q9NXG2 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.09■□□□□ 0.01
THUMPD1Q9NXG2 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.09■□□□□ 0.01
THUMPD1Q9NXG2 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
THUMPD1Q9NXG2 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
THUMPD1Q9NXG2 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
THUMPD1Q9NXG2 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
THUMPD1Q9NXG2 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.09■□□□□ 0.01
THUMPD1Q9NXG2 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
THUMPD1Q9NXG2 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
THUMPD1Q9NXG2 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
THUMPD1Q9NXG2 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
THUMPD1Q9NXG2 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
THUMPD1Q9NXG2 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
THUMPD1Q9NXG2 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
THUMPD1Q9NXG2 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
THUMPD1Q9NXG2 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
THUMPD1Q9NXG2 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
THUMPD1Q9NXG2 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.08■□□□□ 0.01
THUMPD1Q9NXG2 AL109954.1-202ENST00000564051 2148 ntBASIC15.08■□□□□ 0.01
THUMPD1Q9NXG2 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
THUMPD1Q9NXG2 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
THUMPD1Q9NXG2 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.08■□□□□ 0.01
THUMPD1Q9NXG2 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.08■□□□□ 0
THUMPD1Q9NXG2 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.08■□□□□ 0
THUMPD1Q9NXG2 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.08■□□□□ 0
THUMPD1Q9NXG2 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.08■□□□□ 0
THUMPD1Q9NXG2 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.08■□□□□ 0
THUMPD1Q9NXG2 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
THUMPD1Q9NXG2 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.08■□□□□ 0
THUMPD1Q9NXG2 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.08■□□□□ 0
THUMPD1Q9NXG2 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
THUMPD1Q9NXG2 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.08■□□□□ 0
THUMPD1Q9NXG2 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.08■□□□□ 0
THUMPD1Q9NXG2 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.08■□□□□ 0
THUMPD1Q9NXG2 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.08■□□□□ 0
THUMPD1Q9NXG2 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC15.08■□□□□ 0
THUMPD1Q9NXG2 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC15.08■□□□□ 0
THUMPD1Q9NXG2 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.08■□□□□ 0
THUMPD1Q9NXG2 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC15.08■□□□□ 0
THUMPD1Q9NXG2 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.08■□□□□ 0
THUMPD1Q9NXG2 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.08■□□□□ 0
THUMPD1Q9NXG2 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.08■□□□□ 0
THUMPD1Q9NXG2 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
THUMPD1Q9NXG2 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.08■□□□□ 0
THUMPD1Q9NXG2 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms