Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
LRRC40Q9H9A6 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.26■□□□□ 0.19
LRRC40Q9H9A6 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.26■□□□□ 0.19
LRRC40Q9H9A6 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.26■□□□□ 0.19
LRRC40Q9H9A6 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
LRRC40Q9H9A6 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.26■□□□□ 0.19
LRRC40Q9H9A6 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.26■□□□□ 0.19
LRRC40Q9H9A6 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC40Q9H9A6 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.26■□□□□ 0.19
LRRC40Q9H9A6 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.26■□□□□ 0.19
LRRC40Q9H9A6 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LRRC40Q9H9A6 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LRRC40Q9H9A6 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRRC40Q9H9A6 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LRRC40Q9H9A6 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRRC40Q9H9A6 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.25■□□□□ 0.19
LRRC40Q9H9A6 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
LRRC40Q9H9A6 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRRC40Q9H9A6 LINC00554-201ENST00000564841 3011 ntBASIC16.25■□□□□ 0.19
LRRC40Q9H9A6 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.25■□□□□ 0.19
LRRC40Q9H9A6 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRRC40Q9H9A6 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRRC40Q9H9A6 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRRC40Q9H9A6 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.25■□□□□ 0.19
LRRC40Q9H9A6 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
LRRC40Q9H9A6 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.25■□□□□ 0.19
LRRC40Q9H9A6 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRRC40Q9H9A6 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
LRRC40Q9H9A6 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.25■□□□□ 0.19
LRRC40Q9H9A6 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRRC40Q9H9A6 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.25■□□□□ 0.19
LRRC40Q9H9A6 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LRRC40Q9H9A6 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.25■□□□□ 0.19
LRRC40Q9H9A6 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.25■□□□□ 0.19
LRRC40Q9H9A6 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.25■□□□□ 0.19
LRRC40Q9H9A6 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.25■□□□□ 0.19
LRRC40Q9H9A6 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.25■□□□□ 0.19
LRRC40Q9H9A6 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LRRC40Q9H9A6 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.25■□□□□ 0.19
LRRC40Q9H9A6 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.25■□□□□ 0.19
LRRC40Q9H9A6 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRRC40Q9H9A6 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRRC40Q9H9A6 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LRRC40Q9H9A6 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRRC40Q9H9A6 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LRRC40Q9H9A6 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRRC40Q9H9A6 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRRC40Q9H9A6 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.25■□□□□ 0.19
LRRC40Q9H9A6 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.25■□□□□ 0.19
LRRC40Q9H9A6 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.25■□□□□ 0.19
LRRC40Q9H9A6 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
LRRC40Q9H9A6 AC073347.1-201ENST00000421633 2643 ntBASIC16.25■□□□□ 0.19
LRRC40Q9H9A6 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.25■□□□□ 0.19
LRRC40Q9H9A6 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
LRRC40Q9H9A6 AL136982.4-201ENST00000437689 1740 ntBASIC16.25■□□□□ 0.19
LRRC40Q9H9A6 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LRRC40Q9H9A6 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRRC40Q9H9A6 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.24■□□□□ 0.19
LRRC40Q9H9A6 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRRC40Q9H9A6 NORAD-201ENST00000565493 5339 ntBASIC16.24■□□□□ 0.19
LRRC40Q9H9A6 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRRC40Q9H9A6 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRRC40Q9H9A6 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
LRRC40Q9H9A6 REXO1L1P-202ENST00000608646 1974 ntBASIC16.24■□□□□ 0.19
LRRC40Q9H9A6 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.24■□□□□ 0.19
LRRC40Q9H9A6 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRRC40Q9H9A6 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRRC40Q9H9A6 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
LRRC40Q9H9A6 AC063926.3-201ENST00000624734 5658 ntBASIC16.24■□□□□ 0.19
LRRC40Q9H9A6 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
LRRC40Q9H9A6 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.24■□□□□ 0.19
LRRC40Q9H9A6 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LRRC40Q9H9A6 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LRRC40Q9H9A6 BX842568.4-201ENST00000421222 227 ntBASIC16.24■□□□□ 0.19
LRRC40Q9H9A6 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.24■□□□□ 0.19
LRRC40Q9H9A6 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRRC40Q9H9A6 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.24■□□□□ 0.19
LRRC40Q9H9A6 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.24■□□□□ 0.19
LRRC40Q9H9A6 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRRC40Q9H9A6 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.24■□□□□ 0.19
LRRC40Q9H9A6 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.24■□□□□ 0.19
LRRC40Q9H9A6 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRRC40Q9H9A6 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.24■□□□□ 0.19
LRRC40Q9H9A6 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LRRC40Q9H9A6 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRRC40Q9H9A6 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRRC40Q9H9A6 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LRRC40Q9H9A6 CYP4F24P-201ENST00000586049 1580 ntBASIC16.24■□□□□ 0.19
LRRC40Q9H9A6 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
LRRC40Q9H9A6 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRRC40Q9H9A6 AC020658.6-201ENST00000623564 1870 ntBASIC16.24■□□□□ 0.19
LRRC40Q9H9A6 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.24■□□□□ 0.19
LRRC40Q9H9A6 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LRRC40Q9H9A6 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRRC40Q9H9A6 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.24■□□□□ 0.19
LRRC40Q9H9A6 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LRRC40Q9H9A6 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRRC40Q9H9A6 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
LRRC40Q9H9A6 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
LRRC40Q9H9A6 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms