Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
VPS11Q9H270 AC105250.1-201ENST00000509378 2057 ntBASIC16.14■□□□□ 0.17
VPS11Q9H270 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
VPS11Q9H270 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
VPS11Q9H270 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
VPS11Q9H270 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.14■□□□□ 0.17
VPS11Q9H270 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
VPS11Q9H270 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC16.14■□□□□ 0.17
VPS11Q9H270 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC16.14■□□□□ 0.17
VPS11Q9H270 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VPS11Q9H270 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.14■□□□□ 0.17
VPS11Q9H270 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VPS11Q9H270 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VPS11Q9H270 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
VPS11Q9H270 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.14■□□□□ 0.17
VPS11Q9H270 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VPS11Q9H270 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.14■□□□□ 0.17
VPS11Q9H270 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VPS11Q9H270 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
VPS11Q9H270 CRYGEP-201ENST00000412192 528 ntBASIC16.14■□□□□ 0.17
VPS11Q9H270 IGLL3P-201ENST00000412472 434 ntBASIC16.14■□□□□ 0.17
VPS11Q9H270 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.14■□□□□ 0.17
VPS11Q9H270 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.14■□□□□ 0.17
VPS11Q9H270 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.14■□□□□ 0.17
VPS11Q9H270 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.14■□□□□ 0.17
VPS11Q9H270 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.14■□□□□ 0.17
VPS11Q9H270 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.14■□□□□ 0.17
VPS11Q9H270 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
VPS11Q9H270 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
VPS11Q9H270 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VPS11Q9H270 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VPS11Q9H270 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VPS11Q9H270 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
VPS11Q9H270 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VPS11Q9H270 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.14■□□□□ 0.17
VPS11Q9H270 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
VPS11Q9H270 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VPS11Q9H270 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
VPS11Q9H270 LINC01101-201ENST00000622953 1884 ntBASIC16.14■□□□□ 0.17
VPS11Q9H270 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
VPS11Q9H270 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.14■□□□□ 0.17
VPS11Q9H270 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VPS11Q9H270 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VPS11Q9H270 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VPS11Q9H270 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VPS11Q9H270 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VPS11Q9H270 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
VPS11Q9H270 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
VPS11Q9H270 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VPS11Q9H270 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VPS11Q9H270 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
VPS11Q9H270 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.13■□□□□ 0.17
VPS11Q9H270 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
VPS11Q9H270 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC16.13■□□□□ 0.17
VPS11Q9H270 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VPS11Q9H270 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
VPS11Q9H270 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
VPS11Q9H270 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
VPS11Q9H270 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VPS11Q9H270 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VPS11Q9H270 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
VPS11Q9H270 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
VPS11Q9H270 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VPS11Q9H270 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC16.13■□□□□ 0.17
VPS11Q9H270 TCAF2P1-201ENST00000291129 2421 ntBASIC16.13■□□□□ 0.17
VPS11Q9H270 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VPS11Q9H270 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
VPS11Q9H270 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
VPS11Q9H270 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VPS11Q9H270 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.13■□□□□ 0.17
VPS11Q9H270 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.13■□□□□ 0.17
VPS11Q9H270 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VPS11Q9H270 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.13■□□□□ 0.17
VPS11Q9H270 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
VPS11Q9H270 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.13■□□□□ 0.17
VPS11Q9H270 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.13■□□□□ 0.17
VPS11Q9H270 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.13■□□□□ 0.17
VPS11Q9H270 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.13■□□□□ 0.17
VPS11Q9H270 MIR7706-201ENST00000613747 67 ntBASIC16.13■□□□□ 0.17
VPS11Q9H270 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
VPS11Q9H270 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
VPS11Q9H270 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
VPS11Q9H270 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
VPS11Q9H270 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VPS11Q9H270 AC090616.6-203ENST00000579186 1945 ntBASIC16.13■□□□□ 0.17
VPS11Q9H270 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.13■□□□□ 0.17
VPS11Q9H270 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
VPS11Q9H270 AL365209.1-201ENST00000624418 6473 ntBASIC16.13■□□□□ 0.17
VPS11Q9H270 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VPS11Q9H270 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VPS11Q9H270 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.13■□□□□ 0.17
VPS11Q9H270 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
VPS11Q9H270 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
VPS11Q9H270 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VPS11Q9H270 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
VPS11Q9H270 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
VPS11Q9H270 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
VPS11Q9H270 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.12■□□□□ 0.17
VPS11Q9H270 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
VPS11Q9H270 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms