Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC9.62□□□□□ -0.87
LIMD2Q9BT23 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
LIMD2Q9BT23 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC9.62□□□□□ -0.87
LIMD2Q9BT23 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
LIMD2Q9BT23 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
LIMD2Q9BT23 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC9.62□□□□□ -0.87
LIMD2Q9BT23 FES-204ENST00000414248 2327 ntTSL 2 BASIC9.62□□□□□ -0.87
LIMD2Q9BT23 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC9.62□□□□□ -0.87
LIMD2Q9BT23 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
LIMD2Q9BT23 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC9.62□□□□□ -0.87
LIMD2Q9BT23 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC9.62□□□□□ -0.87
LIMD2Q9BT23 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
LIMD2Q9BT23 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
LIMD2Q9BT23 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
LIMD2Q9BT23 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC9.62□□□□□ -0.87
LIMD2Q9BT23 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
LIMD2Q9BT23 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC9.62□□□□□ -0.87
LIMD2Q9BT23 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
LIMD2Q9BT23 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
LIMD2Q9BT23 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
LIMD2Q9BT23 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
LIMD2Q9BT23 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC9.61□□□□□ -0.87
LIMD2Q9BT23 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC9.61□□□□□ -0.87
LIMD2Q9BT23 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC9.61□□□□□ -0.87
LIMD2Q9BT23 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC9.61□□□□□ -0.87
LIMD2Q9BT23 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC9.61□□□□□ -0.87
LIMD2Q9BT23 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
LIMD2Q9BT23 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
LIMD2Q9BT23 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC9.61□□□□□ -0.87
LIMD2Q9BT23 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
LIMD2Q9BT23 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
LIMD2Q9BT23 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
LIMD2Q9BT23 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
LIMD2Q9BT23 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
LIMD2Q9BT23 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
LIMD2Q9BT23 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
LIMD2Q9BT23 RNF216P1-203ENST00000404404 2427 ntBASIC9.61□□□□□ -0.87
LIMD2Q9BT23 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC9.61□□□□□ -0.87
LIMD2Q9BT23 CA12-203ENST00000422263 2556 ntTSL 2 BASIC9.61□□□□□ -0.87
LIMD2Q9BT23 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC9.61□□□□□ -0.87
LIMD2Q9BT23 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
LIMD2Q9BT23 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
LIMD2Q9BT23 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
LIMD2Q9BT23 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
LIMD2Q9BT23 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC9.61□□□□□ -0.87
LIMD2Q9BT23 CRYGEP-201ENST00000412192 528 ntBASIC9.61□□□□□ -0.87
LIMD2Q9BT23 DUSP5P1-201ENST00000441325 1139 ntBASIC9.61□□□□□ -0.87
LIMD2Q9BT23 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
LIMD2Q9BT23 CXCL1P1-201ENST00000502804 216 ntBASIC9.61□□□□□ -0.87
LIMD2Q9BT23 PENK-208ENST00000523051 772 ntTSL 5 BASIC9.61□□□□□ -0.87
LIMD2Q9BT23 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC9.61□□□□□ -0.87
LIMD2Q9BT23 AC107918.2-201ENST00000530817 355 ntBASIC9.61□□□□□ -0.87
LIMD2Q9BT23 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
LIMD2Q9BT23 RIN3-211ENST00000557762 517 ntTSL 3 BASIC9.61□□□□□ -0.87
LIMD2Q9BT23 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC9.61□□□□□ -0.87
LIMD2Q9BT23 AL031432.2-201ENST00000566714 459 ntBASIC9.61□□□□□ -0.87
LIMD2Q9BT23 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC9.61□□□□□ -0.87
LIMD2Q9BT23 AL928711.1-201ENST00000570165 459 ntBASIC9.61□□□□□ -0.87
LIMD2Q9BT23 MIR3909-201ENST00000579518 119 ntBASIC9.61□□□□□ -0.87
LIMD2Q9BT23 MIR4492-201ENST00000581627 80 ntBASIC9.61□□□□□ -0.87
LIMD2Q9BT23 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
LIMD2Q9BT23 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC9.61□□□□□ -0.87
LIMD2Q9BT23 AC007064.4-201ENST00000637740 555 ntBASIC9.61□□□□□ -0.87
LIMD2Q9BT23 VPS51-217ENST00000639871 243 ntTSL 5 BASIC9.61□□□□□ -0.87
LIMD2Q9BT23 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
LIMD2Q9BT23 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
LIMD2Q9BT23 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
LIMD2Q9BT23 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
LIMD2Q9BT23 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
LIMD2Q9BT23 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
LIMD2Q9BT23 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC9.61□□□□□ -0.87
LIMD2Q9BT23 PCGF3-213ENST00000620529 1899 ntBASIC9.61□□□□□ -0.87
LIMD2Q9BT23 SLC9A3P2-201ENST00000447821 2021 ntBASIC9.61□□□□□ -0.87
LIMD2Q9BT23 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
LIMD2Q9BT23 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
LIMD2Q9BT23 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
LIMD2Q9BT23 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
LIMD2Q9BT23 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC9.61□□□□□ -0.87
LIMD2Q9BT23 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
LIMD2Q9BT23 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
LIMD2Q9BT23 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC9.61□□□□□ -0.87
LIMD2Q9BT23 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC9.61□□□□□ -0.87
LIMD2Q9BT23 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC9.61□□□□□ -0.87
LIMD2Q9BT23 GGT3P-204ENST00000453783 1664 ntBASIC9.61□□□□□ -0.87
LIMD2Q9BT23 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC9.61□□□□□ -0.87
LIMD2Q9BT23 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
LIMD2Q9BT23 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC9.61□□□□□ -0.87
LIMD2Q9BT23 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
LIMD2Q9BT23 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
LIMD2Q9BT23 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
LIMD2Q9BT23 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
LIMD2Q9BT23 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
LIMD2Q9BT23 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC9.6□□□□□ -0.87
LIMD2Q9BT23 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
LIMD2Q9BT23 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
LIMD2Q9BT23 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
LIMD2Q9BT23 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
LIMD2Q9BT23 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
LIMD2Q9BT23 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
LIMD2Q9BT23 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC9.6□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms