Protein–RNA interactions for Protein: Q9BQP9

BPIFA3, BPI fold-containing family A member 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BPIFA3Q9BQP9 LINC00552-201ENST00000625151 2579 ntBASIC17.66■□□□□ 0.42
BPIFA3Q9BQP9 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
BPIFA3Q9BQP9 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BPIFA3Q9BQP9 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BPIFA3Q9BQP9 AP002414.2-201ENST00000591780 3365 ntBASIC17.66■□□□□ 0.42
BPIFA3Q9BQP9 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC17.66■□□□□ 0.42
BPIFA3Q9BQP9 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
BPIFA3Q9BQP9 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BPIFA3Q9BQP9 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
BPIFA3Q9BQP9 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
BPIFA3Q9BQP9 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
BPIFA3Q9BQP9 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
BPIFA3Q9BQP9 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.66■□□□□ 0.42
BPIFA3Q9BQP9 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC17.66■□□□□ 0.42
BPIFA3Q9BQP9 IGHV3-22-201ENST00000520721 359 ntBASIC17.66■□□□□ 0.42
BPIFA3Q9BQP9 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.66■□□□□ 0.42
BPIFA3Q9BQP9 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.66■□□□□ 0.42
BPIFA3Q9BQP9 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.66■□□□□ 0.42
BPIFA3Q9BQP9 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
BPIFA3Q9BQP9 AL450472.2-201ENST00000603663 1156 ntBASIC17.66■□□□□ 0.42
BPIFA3Q9BQP9 AL773604.1-201ENST00000617417 272 ntBASIC17.66■□□□□ 0.42
BPIFA3Q9BQP9 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
BPIFA3Q9BQP9 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.66■□□□□ 0.42
BPIFA3Q9BQP9 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BPIFA3Q9BQP9 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
BPIFA3Q9BQP9 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BPIFA3Q9BQP9 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BPIFA3Q9BQP9 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
BPIFA3Q9BQP9 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
BPIFA3Q9BQP9 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
BPIFA3Q9BQP9 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BPIFA3Q9BQP9 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
BPIFA3Q9BQP9 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
BPIFA3Q9BQP9 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BPIFA3Q9BQP9 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC17.65■□□□□ 0.42
BPIFA3Q9BQP9 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC17.65■□□□□ 0.42
BPIFA3Q9BQP9 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BPIFA3Q9BQP9 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
BPIFA3Q9BQP9 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BPIFA3Q9BQP9 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC17.65■□□□□ 0.42
BPIFA3Q9BQP9 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC17.65■□□□□ 0.42
BPIFA3Q9BQP9 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BPIFA3Q9BQP9 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BPIFA3Q9BQP9 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC17.65■□□□□ 0.42
BPIFA3Q9BQP9 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
BPIFA3Q9BQP9 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BPIFA3Q9BQP9 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BPIFA3Q9BQP9 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BPIFA3Q9BQP9 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BPIFA3Q9BQP9 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.65■□□□□ 0.42
BPIFA3Q9BQP9 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
BPIFA3Q9BQP9 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.65■□□□□ 0.42
BPIFA3Q9BQP9 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.65■□□□□ 0.42
BPIFA3Q9BQP9 RNA5SP415-201ENST00000517246 115 ntBASIC17.65■□□□□ 0.42
BPIFA3Q9BQP9 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
BPIFA3Q9BQP9 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC17.65■□□□□ 0.42
BPIFA3Q9BQP9 AC105233.2-201ENST00000523697 349 ntBASIC17.65■□□□□ 0.42
BPIFA3Q9BQP9 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.65■□□□□ 0.42
BPIFA3Q9BQP9 AF228730.5-201ENST00000530288 346 ntBASIC17.65■□□□□ 0.42
BPIFA3Q9BQP9 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
BPIFA3Q9BQP9 COQ9-214ENST00000567933 882 ntTSL 3 BASIC17.65■□□□□ 0.42
BPIFA3Q9BQP9 AL138918.1-201ENST00000568306 659 ntBASIC17.65■□□□□ 0.42
BPIFA3Q9BQP9 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
BPIFA3Q9BQP9 AC116407.3-201ENST00000623905 1129 ntBASIC17.65■□□□□ 0.42
BPIFA3Q9BQP9 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
BPIFA3Q9BQP9 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
BPIFA3Q9BQP9 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC17.65■□□□□ 0.42
BPIFA3Q9BQP9 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BPIFA3Q9BQP9 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC17.65■□□□□ 0.42
BPIFA3Q9BQP9 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
BPIFA3Q9BQP9 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC17.65■□□□□ 0.42
BPIFA3Q9BQP9 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BPIFA3Q9BQP9 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
BPIFA3Q9BQP9 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC17.65■□□□□ 0.42
BPIFA3Q9BQP9 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
BPIFA3Q9BQP9 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
BPIFA3Q9BQP9 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
BPIFA3Q9BQP9 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC17.64■□□□□ 0.42
BPIFA3Q9BQP9 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.42
BPIFA3Q9BQP9 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.64■□□□□ 0.42
BPIFA3Q9BQP9 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
BPIFA3Q9BQP9 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC17.64■□□□□ 0.42
BPIFA3Q9BQP9 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
BPIFA3Q9BQP9 RER1-203ENST00000378513 3000 ntTSL 3 BASIC17.64■□□□□ 0.41
BPIFA3Q9BQP9 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BPIFA3Q9BQP9 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BPIFA3Q9BQP9 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
BPIFA3Q9BQP9 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
BPIFA3Q9BQP9 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
BPIFA3Q9BQP9 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.64■□□□□ 0.41
BPIFA3Q9BQP9 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
BPIFA3Q9BQP9 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC17.64■□□□□ 0.41
BPIFA3Q9BQP9 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
BPIFA3Q9BQP9 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
BPIFA3Q9BQP9 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
BPIFA3Q9BQP9 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
BPIFA3Q9BQP9 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BPIFA3Q9BQP9 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.64■□□□□ 0.41
BPIFA3Q9BQP9 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BPIFA3Q9BQP9 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms