Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.68■□□□□ 0.26
SMOQ99835 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.68■□□□□ 0.26
SMOQ99835 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMOQ99835 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16.68■□□□□ 0.26
SMOQ99835 AC093004.1-201ENST00000508850 424 ntBASIC16.68■□□□□ 0.26
SMOQ99835 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.68■□□□□ 0.26
SMOQ99835 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.68■□□□□ 0.26
SMOQ99835 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.68■□□□□ 0.26
SMOQ99835 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC16.68■□□□□ 0.26
SMOQ99835 CHCHD2P3-201ENST00000603038 451 ntBASIC16.68■□□□□ 0.26
SMOQ99835 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMOQ99835 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.68■□□□□ 0.26
SMOQ99835 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SMOQ99835 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
SMOQ99835 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMOQ99835 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMOQ99835 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMOQ99835 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
SMOQ99835 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMOQ99835 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMOQ99835 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
SMOQ99835 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMOQ99835 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMOQ99835 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMOQ99835 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMOQ99835 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMOQ99835 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.67■□□□□ 0.26
SMOQ99835 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SMOQ99835 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SMOQ99835 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SMOQ99835 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.67■□□□□ 0.26
SMOQ99835 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.67■□□□□ 0.26
SMOQ99835 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
SMOQ99835 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
SMOQ99835 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SMOQ99835 SLC7A15P-201ENST00000424028 1363 ntBASIC16.67■□□□□ 0.26
SMOQ99835 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SMOQ99835 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
SMOQ99835 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SMOQ99835 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SMOQ99835 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
SMOQ99835 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.67■□□□□ 0.26
SMOQ99835 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.67■□□□□ 0.26
SMOQ99835 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SMOQ99835 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SMOQ99835 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SMOQ99835 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.67■□□□□ 0.26
SMOQ99835 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SMOQ99835 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SMOQ99835 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16.67■□□□□ 0.26
SMOQ99835 AC015922.1-201ENST00000421102 1152 ntBASIC16.67■□□□□ 0.26
SMOQ99835 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SMOQ99835 AL353779.1-201ENST00000434793 351 ntBASIC16.67■□□□□ 0.26
SMOQ99835 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.67■□□□□ 0.26
SMOQ99835 TAF8-206ENST00000472818 719 ntTSL 2 BASIC16.67■□□□□ 0.26
SMOQ99835 SLED1-202ENST00000512051 380 ntBASIC16.67■□□□□ 0.26
SMOQ99835 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SMOQ99835 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.67■□□□□ 0.26
SMOQ99835 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.67■□□□□ 0.26
SMOQ99835 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC16.67■□□□□ 0.26
SMOQ99835 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SMOQ99835 COX11-202ENST00000571584 1108 ntTSL 2 BASIC16.67■□□□□ 0.26
SMOQ99835 AL391069.4-201ENST00000609583 481 ntBASIC16.67■□□□□ 0.26
SMOQ99835 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.67■□□□□ 0.26
SMOQ99835 AL662799.1-202ENST00000614205 422 ntBASIC16.67■□□□□ 0.26
SMOQ99835 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SMOQ99835 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
SMOQ99835 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.67■□□□□ 0.26
SMOQ99835 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.67■□□□□ 0.26
SMOQ99835 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.67■□□□□ 0.26
SMOQ99835 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.67■□□□□ 0.26
SMOQ99835 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SMOQ99835 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.66■□□□□ 0.26
SMOQ99835 AL365203.3-201ENST00000609742 2057 ntBASIC16.66■□□□□ 0.26
SMOQ99835 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMOQ99835 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMOQ99835 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SMOQ99835 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMOQ99835 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.66■□□□□ 0.26
SMOQ99835 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMOQ99835 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.66■□□□□ 0.26
SMOQ99835 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.66■□□□□ 0.26
SMOQ99835 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SMOQ99835 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMOQ99835 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.66■□□□□ 0.26
SMOQ99835 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
SMOQ99835 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.66■□□□□ 0.26
SMOQ99835 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.66■□□□□ 0.26
SMOQ99835 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SMOQ99835 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMOQ99835 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.66■□□□□ 0.26
SMOQ99835 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
SMOQ99835 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC16.66■□□□□ 0.26
SMOQ99835 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMOQ99835 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SMOQ99835 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SMOQ99835 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMOQ99835 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
SMOQ99835 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SMOQ99835 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms