Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 HOMER2P1-201ENST00000455653 964 ntBASIC10.65□□□□□ -0.7
LITAFQ99732 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
LITAFQ99732 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC10.65□□□□□ -0.7
LITAFQ99732 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC10.65□□□□□ -0.7
LITAFQ99732 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC10.65□□□□□ -0.7
LITAFQ99732 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC10.65□□□□□ -0.7
LITAFQ99732 AC064862.7-201ENST00000604520 867 ntBASIC10.65□□□□□ -0.7
LITAFQ99732 AL139424.1-201ENST00000607572 797 ntBASIC10.65□□□□□ -0.7
LITAFQ99732 WT1-AS_2.1-201ENST00000613208 137 ntBASIC10.65□□□□□ -0.7
LITAFQ99732 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC10.65□□□□□ -0.7
LITAFQ99732 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC10.65□□□□□ -0.7
LITAFQ99732 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC10.65□□□□□ -0.7
LITAFQ99732 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC10.65□□□□□ -0.7
LITAFQ99732 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC10.65□□□□□ -0.7
LITAFQ99732 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
LITAFQ99732 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC10.65□□□□□ -0.7
LITAFQ99732 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
LITAFQ99732 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LITAFQ99732 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
LITAFQ99732 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LITAFQ99732 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
LITAFQ99732 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.71
LITAFQ99732 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC10.65□□□□□ -0.71
LITAFQ99732 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC10.65□□□□□ -0.71
LITAFQ99732 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
LITAFQ99732 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
LITAFQ99732 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.71
LITAFQ99732 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.71
LITAFQ99732 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
LITAFQ99732 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC10.65□□□□□ -0.71
LITAFQ99732 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
LITAFQ99732 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC10.65□□□□□ -0.71
LITAFQ99732 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.71
LITAFQ99732 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LITAFQ99732 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
LITAFQ99732 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
LITAFQ99732 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LITAFQ99732 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC10.64□□□□□ -0.71
LITAFQ99732 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
LITAFQ99732 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
LITAFQ99732 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LITAFQ99732 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC10.64□□□□□ -0.71
LITAFQ99732 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LITAFQ99732 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC10.64□□□□□ -0.71
LITAFQ99732 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LITAFQ99732 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LITAFQ99732 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LITAFQ99732 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC10.64□□□□□ -0.71
LITAFQ99732 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LITAFQ99732 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LITAFQ99732 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
LITAFQ99732 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
LITAFQ99732 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC10.64□□□□□ -0.71
LITAFQ99732 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
LITAFQ99732 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LITAFQ99732 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LITAFQ99732 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
LITAFQ99732 AL645929.1-201ENST00000420084 975 ntBASIC10.64□□□□□ -0.71
LITAFQ99732 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC10.64□□□□□ -0.71
LITAFQ99732 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
LITAFQ99732 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LITAFQ99732 DUT-205ENST00000558813 769 ntTSL 2 BASIC10.64□□□□□ -0.71
LITAFQ99732 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC10.64□□□□□ -0.71
LITAFQ99732 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC10.64□□□□□ -0.71
LITAFQ99732 BNIP3P18-201ENST00000593976 575 ntBASIC10.64□□□□□ -0.71
LITAFQ99732 AC083849.1-201ENST00000615227 514 ntBASIC10.64□□□□□ -0.71
LITAFQ99732 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC10.64□□□□□ -0.71
LITAFQ99732 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
LITAFQ99732 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC10.64□□□□□ -0.71
LITAFQ99732 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LITAFQ99732 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
LITAFQ99732 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LITAFQ99732 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
LITAFQ99732 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
LITAFQ99732 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC10.64□□□□□ -0.71
LITAFQ99732 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
LITAFQ99732 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC10.64□□□□□ -0.71
LITAFQ99732 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC10.64□□□□□ -0.71
LITAFQ99732 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LITAFQ99732 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LITAFQ99732 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC10.64□□□□□ -0.71
LITAFQ99732 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
LITAFQ99732 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LITAFQ99732 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LITAFQ99732 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
LITAFQ99732 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
LITAFQ99732 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
LITAFQ99732 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
LITAFQ99732 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC10.64□□□□□ -0.71
LITAFQ99732 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LITAFQ99732 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LITAFQ99732 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC10.63□□□□□ -0.71
LITAFQ99732 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC10.63□□□□□ -0.71
LITAFQ99732 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
LITAFQ99732 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
LITAFQ99732 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC10.63□□□□□ -0.71
LITAFQ99732 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LITAFQ99732 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC10.63□□□□□ -0.71
LITAFQ99732 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
LITAFQ99732 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms