Protein–RNA interactions for Protein: Q99504

EYA3, Eyes absent homolog 3, humanhuman

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EYA3Q99504 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
EYA3Q99504 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
EYA3Q99504 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
EYA3Q99504 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC19.27■□□□□ 0.68
EYA3Q99504 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
EYA3Q99504 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC19.27■□□□□ 0.68
EYA3Q99504 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC19.27■□□□□ 0.68
EYA3Q99504 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC19.27■□□□□ 0.68
EYA3Q99504 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC19.27■□□□□ 0.68
EYA3Q99504 AC010328.2-201ENST00000597698 1111 ntBASIC19.27■□□□□ 0.68
EYA3Q99504 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC19.27■□□□□ 0.68
EYA3Q99504 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
EYA3Q99504 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC19.27■□□□□ 0.68
EYA3Q99504 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
EYA3Q99504 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
EYA3Q99504 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
EYA3Q99504 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC19.27■□□□□ 0.68
EYA3Q99504 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
EYA3Q99504 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
EYA3Q99504 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
EYA3Q99504 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
EYA3Q99504 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
EYA3Q99504 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC19.27■□□□□ 0.67
EYA3Q99504 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC19.27■□□□□ 0.67
EYA3Q99504 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC19.27■□□□□ 0.67
EYA3Q99504 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
EYA3Q99504 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
EYA3Q99504 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC19.27■□□□□ 0.67
EYA3Q99504 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC19.27■□□□□ 0.67
EYA3Q99504 FLJ38576-201ENST00000623820 2459 ntBASIC19.27■□□□□ 0.67
EYA3Q99504 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
EYA3Q99504 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
EYA3Q99504 USE1-206ENST00000595101 1776 ntTSL 2 BASIC19.27■□□□□ 0.67
EYA3Q99504 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
EYA3Q99504 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
EYA3Q99504 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
EYA3Q99504 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
EYA3Q99504 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
EYA3Q99504 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC19.26■□□□□ 0.67
EYA3Q99504 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC19.26■□□□□ 0.67
EYA3Q99504 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC19.26■□□□□ 0.67
EYA3Q99504 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC19.26■□□□□ 0.67
EYA3Q99504 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC19.26■□□□□ 0.67
EYA3Q99504 AC092171.3-201ENST00000610122 2651 ntBASIC19.26■□□□□ 0.67
EYA3Q99504 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
EYA3Q99504 BRF1-202ENST00000379932 884 ntTSL 5 BASIC19.26■□□□□ 0.67
EYA3Q99504 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
EYA3Q99504 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC19.26■□□□□ 0.67
EYA3Q99504 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
EYA3Q99504 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
EYA3Q99504 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC19.26■□□□□ 0.67
EYA3Q99504 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
EYA3Q99504 ATF5-205ENST00000600336 682 ntTSL 2 BASIC19.26■□□□□ 0.67
EYA3Q99504 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC19.26■□□□□ 0.67
EYA3Q99504 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC19.26■□□□□ 0.67
EYA3Q99504 RHOXF1P1-202ENST00000635473 501 ntBASIC19.26■□□□□ 0.67
EYA3Q99504 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
EYA3Q99504 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
EYA3Q99504 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC19.26■□□□□ 0.67
EYA3Q99504 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
EYA3Q99504 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
EYA3Q99504 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC19.26■□□□□ 0.67
EYA3Q99504 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
EYA3Q99504 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
EYA3Q99504 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC19.25■□□□□ 0.67
EYA3Q99504 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
EYA3Q99504 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC19.25■□□□□ 0.67
EYA3Q99504 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
EYA3Q99504 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
EYA3Q99504 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
EYA3Q99504 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
EYA3Q99504 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC19.25■□□□□ 0.67
EYA3Q99504 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC19.25■□□□□ 0.67
EYA3Q99504 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC19.25■□□□□ 0.67
EYA3Q99504 AC108725.1-201ENST00000495472 409 ntBASIC19.25■□□□□ 0.67
EYA3Q99504 AC106760.1-201ENST00000508690 800 ntBASIC19.25■□□□□ 0.67
EYA3Q99504 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC19.25■□□□□ 0.67
EYA3Q99504 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC19.25■□□□□ 0.67
EYA3Q99504 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC19.25■□□□□ 0.67
EYA3Q99504 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
EYA3Q99504 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC19.25■□□□□ 0.67
EYA3Q99504 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
EYA3Q99504 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
EYA3Q99504 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
EYA3Q99504 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
EYA3Q99504 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
EYA3Q99504 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
EYA3Q99504 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
EYA3Q99504 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC19.25■□□□□ 0.67
EYA3Q99504 AL121723.1-201ENST00000445194 1519 ntBASIC19.25■□□□□ 0.67
EYA3Q99504 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
EYA3Q99504 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EYA3Q99504 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EYA3Q99504 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC19.24■□□□□ 0.67
EYA3Q99504 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EYA3Q99504 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
EYA3Q99504 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC19.24■□□□□ 0.67
EYA3Q99504 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
EYA3Q99504 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
EYA3Q99504 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms