Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC13.39□□□□□ -0.27
CSMD1Q96PZ7 VDAC1P7-201ENST00000462417 847 ntBASIC13.39□□□□□ -0.27
CSMD1Q96PZ7 PPOX-204ENST00000462866 473 ntTSL 5 BASIC13.39□□□□□ -0.27
CSMD1Q96PZ7 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC13.39□□□□□ -0.27
CSMD1Q96PZ7 AC135983.4-201ENST00000564116 1262 ntBASIC13.39□□□□□ -0.27
CSMD1Q96PZ7 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.39□□□□□ -0.27
CSMD1Q96PZ7 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CSMD1Q96PZ7 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CSMD1Q96PZ7 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CSMD1Q96PZ7 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
CSMD1Q96PZ7 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CSMD1Q96PZ7 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC13.39□□□□□ -0.27
CSMD1Q96PZ7 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
CSMD1Q96PZ7 AMT-206ENST00000458307 1860 ntTSL 2 BASIC13.39□□□□□ -0.27
CSMD1Q96PZ7 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CSMD1Q96PZ7 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC13.39□□□□□ -0.27
CSMD1Q96PZ7 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CSMD1Q96PZ7 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CSMD1Q96PZ7 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC13.39□□□□□ -0.27
CSMD1Q96PZ7 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC13.39□□□□□ -0.27
CSMD1Q96PZ7 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC13.39□□□□□ -0.27
CSMD1Q96PZ7 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
CSMD1Q96PZ7 AC078925.2-201ENST00000624013 1973 ntBASIC13.39□□□□□ -0.27
CSMD1Q96PZ7 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CSMD1Q96PZ7 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CSMD1Q96PZ7 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CSMD1Q96PZ7 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC13.39□□□□□ -0.27
CSMD1Q96PZ7 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CSMD1Q96PZ7 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CSMD1Q96PZ7 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CSMD1Q96PZ7 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CSMD1Q96PZ7 AC018892.3-201ENST00000623986 2499 ntBASIC13.39□□□□□ -0.27
CSMD1Q96PZ7 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CSMD1Q96PZ7 AP003680.1-201ENST00000598970 3660 ntBASIC13.39□□□□□ -0.27
CSMD1Q96PZ7 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CSMD1Q96PZ7 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
CSMD1Q96PZ7 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC13.39□□□□□ -0.27
CSMD1Q96PZ7 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
CSMD1Q96PZ7 AL596276.2-201ENST00000447525 331 ntBASIC13.38□□□□□ -0.27
CSMD1Q96PZ7 HSPB1P2-201ENST00000448722 546 ntBASIC13.38□□□□□ -0.27
CSMD1Q96PZ7 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC13.38□□□□□ -0.27
CSMD1Q96PZ7 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC13.38□□□□□ -0.27
CSMD1Q96PZ7 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC13.38□□□□□ -0.27
CSMD1Q96PZ7 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CSMD1Q96PZ7 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CSMD1Q96PZ7 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC13.38□□□□□ -0.27
CSMD1Q96PZ7 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CSMD1Q96PZ7 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
CSMD1Q96PZ7 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
CSMD1Q96PZ7 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
CSMD1Q96PZ7 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CSMD1Q96PZ7 AC105020.1-201ENST00000435356 2205 ntBASIC13.38□□□□□ -0.27
CSMD1Q96PZ7 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CSMD1Q96PZ7 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC13.38□□□□□ -0.27
CSMD1Q96PZ7 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
CSMD1Q96PZ7 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CSMD1Q96PZ7 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC13.38□□□□□ -0.27
CSMD1Q96PZ7 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.38□□□□□ -0.27
CSMD1Q96PZ7 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CSMD1Q96PZ7 AP001065.2-201ENST00000617205 644 ntBASIC13.38□□□□□ -0.27
CSMD1Q96PZ7 AC006453.4-201ENST00000636949 1252 ntBASIC13.38□□□□□ -0.27
CSMD1Q96PZ7 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
CSMD1Q96PZ7 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CSMD1Q96PZ7 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC13.38□□□□□ -0.27
CSMD1Q96PZ7 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
CSMD1Q96PZ7 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CSMD1Q96PZ7 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
CSMD1Q96PZ7 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC13.38□□□□□ -0.27
CSMD1Q96PZ7 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
CSMD1Q96PZ7 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
CSMD1Q96PZ7 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CSMD1Q96PZ7 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
CSMD1Q96PZ7 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CSMD1Q96PZ7 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC13.38□□□□□ -0.27
CSMD1Q96PZ7 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CSMD1Q96PZ7 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CSMD1Q96PZ7 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
CSMD1Q96PZ7 AC134915.1-201ENST00000426461 574 ntBASIC13.38□□□□□ -0.27
CSMD1Q96PZ7 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CSMD1Q96PZ7 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
CSMD1Q96PZ7 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
CSMD1Q96PZ7 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CSMD1Q96PZ7 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC13.38□□□□□ -0.27
CSMD1Q96PZ7 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.38□□□□□ -0.27
CSMD1Q96PZ7 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CSMD1Q96PZ7 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CSMD1Q96PZ7 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC13.37□□□□□ -0.27
CSMD1Q96PZ7 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
CSMD1Q96PZ7 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CSMD1Q96PZ7 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
CSMD1Q96PZ7 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
CSMD1Q96PZ7 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CSMD1Q96PZ7 AC012618.1-201ENST00000461223 412 ntBASIC13.37□□□□□ -0.27
CSMD1Q96PZ7 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CSMD1Q96PZ7 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.37□□□□□ -0.27
CSMD1Q96PZ7 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
CSMD1Q96PZ7 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CSMD1Q96PZ7 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
CSMD1Q96PZ7 AL138709.1-201ENST00000614840 1693 ntBASIC13.37□□□□□ -0.27
CSMD1Q96PZ7 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms