Protein–RNA interactions for Protein: Q96PB8

LRRC3B, Leucine-rich repeat-containing protein 3B, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3BQ96PB8 RN7SL219P-201ENST00000582872 296 ntBASIC16.17■□□□□ 0.18
LRRC3BQ96PB8 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC16.17■□□□□ 0.18
LRRC3BQ96PB8 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
LRRC3BQ96PB8 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
LRRC3BQ96PB8 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC16.17■□□□□ 0.18
LRRC3BQ96PB8 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC3BQ96PB8 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.17■□□□□ 0.18
LRRC3BQ96PB8 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC3BQ96PB8 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
LRRC3BQ96PB8 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.17■□□□□ 0.18
LRRC3BQ96PB8 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC3BQ96PB8 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC3BQ96PB8 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC3BQ96PB8 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
LRRC3BQ96PB8 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC3BQ96PB8 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.17■□□□□ 0.18
LRRC3BQ96PB8 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC3BQ96PB8 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC3BQ96PB8 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC3BQ96PB8 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.16■□□□□ 0.18
LRRC3BQ96PB8 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRRC3BQ96PB8 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRRC3BQ96PB8 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.16■□□□□ 0.18
LRRC3BQ96PB8 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRRC3BQ96PB8 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRRC3BQ96PB8 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
LRRC3BQ96PB8 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRRC3BQ96PB8 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
LRRC3BQ96PB8 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRRC3BQ96PB8 TEX30-203ENST00000376022 828 ntTSL 2 BASIC16.16■□□□□ 0.18
LRRC3BQ96PB8 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC16.16■□□□□ 0.18
LRRC3BQ96PB8 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC16.16■□□□□ 0.18
LRRC3BQ96PB8 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRRC3BQ96PB8 AL355994.2-201ENST00000447882 704 ntBASIC16.16■□□□□ 0.18
LRRC3BQ96PB8 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC16.16■□□□□ 0.18
LRRC3BQ96PB8 AC108725.1-201ENST00000495472 409 ntBASIC16.16■□□□□ 0.18
LRRC3BQ96PB8 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC16.16■□□□□ 0.18
LRRC3BQ96PB8 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRRC3BQ96PB8 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.16■□□□□ 0.18
LRRC3BQ96PB8 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.16■□□□□ 0.18
LRRC3BQ96PB8 AC015910.1-201ENST00000579400 975 ntBASIC16.16■□□□□ 0.18
LRRC3BQ96PB8 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRRC3BQ96PB8 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
LRRC3BQ96PB8 MIR6787-201ENST00000616675 61 ntBASIC16.16■□□□□ 0.18
LRRC3BQ96PB8 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRRC3BQ96PB8 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
LRRC3BQ96PB8 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRRC3BQ96PB8 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRRC3BQ96PB8 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRRC3BQ96PB8 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
LRRC3BQ96PB8 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC16.16■□□□□ 0.18
LRRC3BQ96PB8 PCDHA12-202ENST00000613593 2588 ntBASIC16.16■□□□□ 0.18
LRRC3BQ96PB8 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRRC3BQ96PB8 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRRC3BQ96PB8 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
LRRC3BQ96PB8 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRRC3BQ96PB8 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRRC3BQ96PB8 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC3BQ96PB8 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC3BQ96PB8 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.15■□□□□ 0.18
LRRC3BQ96PB8 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.15■□□□□ 0.18
LRRC3BQ96PB8 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
LRRC3BQ96PB8 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC3BQ96PB8 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC3BQ96PB8 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.15■□□□□ 0.18
LRRC3BQ96PB8 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
LRRC3BQ96PB8 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC3BQ96PB8 ACKR1-201ENST00000368121 1240 ntBASIC16.15■□□□□ 0.18
LRRC3BQ96PB8 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC3BQ96PB8 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC3BQ96PB8 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC3BQ96PB8 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC3BQ96PB8 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC3BQ96PB8 AC022137.2-201ENST00000503482 481 ntBASIC16.15■□□□□ 0.18
LRRC3BQ96PB8 GAPDHP40-201ENST00000505218 1006 ntBASIC16.15■□□□□ 0.18
LRRC3BQ96PB8 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC16.15■□□□□ 0.18
LRRC3BQ96PB8 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.15■□□□□ 0.18
LRRC3BQ96PB8 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
LRRC3BQ96PB8 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC16.15■□□□□ 0.18
LRRC3BQ96PB8 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC16.15■□□□□ 0.18
LRRC3BQ96PB8 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC3BQ96PB8 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC16.15■□□□□ 0.18
LRRC3BQ96PB8 AC107373.2-201ENST00000607735 490 ntBASIC16.15■□□□□ 0.18
LRRC3BQ96PB8 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.15■□□□□ 0.18
LRRC3BQ96PB8 SNX12-206ENST00000622259 661 ntTSL 5 BASIC16.15■□□□□ 0.18
LRRC3BQ96PB8 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC3BQ96PB8 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
LRRC3BQ96PB8 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC3BQ96PB8 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
LRRC3BQ96PB8 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.15■□□□□ 0.18
LRRC3BQ96PB8 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC3BQ96PB8 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
LRRC3BQ96PB8 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
LRRC3BQ96PB8 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
LRRC3BQ96PB8 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
LRRC3BQ96PB8 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC3BQ96PB8 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC3BQ96PB8 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC3BQ96PB8 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
LRRC3BQ96PB8 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms