Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.92■□□□□ 0.3
TRIM11Q96F44 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM11Q96F44 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM11Q96F44 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM11Q96F44 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM11Q96F44 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM11Q96F44 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM11Q96F44 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM11Q96F44 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM11Q96F44 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM11Q96F44 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
TRIM11Q96F44 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.92■□□□□ 0.3
TRIM11Q96F44 EEF1DP4-201ENST00000446006 880 ntBASIC16.92■□□□□ 0.3
TRIM11Q96F44 DNAJB3-201ENST00000446806 729 ntBASIC16.92■□□□□ 0.3
TRIM11Q96F44 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.92■□□□□ 0.3
TRIM11Q96F44 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TRIM11Q96F44 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.92■□□□□ 0.3
TRIM11Q96F44 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.92■□□□□ 0.3
TRIM11Q96F44 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.92■□□□□ 0.3
TRIM11Q96F44 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.92■□□□□ 0.3
TRIM11Q96F44 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM11Q96F44 SSR4P1-203ENST00000599569 2260 ntBASIC16.92■□□□□ 0.3
TRIM11Q96F44 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM11Q96F44 CYP4F24P-201ENST00000586049 1580 ntBASIC16.92■□□□□ 0.3
TRIM11Q96F44 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.92■□□□□ 0.3
TRIM11Q96F44 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.92■□□□□ 0.3
TRIM11Q96F44 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM11Q96F44 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM11Q96F44 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
TRIM11Q96F44 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.92■□□□□ 0.3
TRIM11Q96F44 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.92■□□□□ 0.3
TRIM11Q96F44 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TRIM11Q96F44 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM11Q96F44 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM11Q96F44 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM11Q96F44 ELL2P1-201ENST00000413990 1906 ntBASIC16.92■□□□□ 0.3
TRIM11Q96F44 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM11Q96F44 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
TRIM11Q96F44 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM11Q96F44 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
TRIM11Q96F44 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM11Q96F44 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.91■□□□□ 0.3
TRIM11Q96F44 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.91■□□□□ 0.3
TRIM11Q96F44 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM11Q96F44 CICP13-201ENST00000422015 2789 ntBASIC16.91■□□□□ 0.3
TRIM11Q96F44 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM11Q96F44 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM11Q96F44 AL136982.4-201ENST00000437689 1740 ntBASIC16.91■□□□□ 0.3
TRIM11Q96F44 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM11Q96F44 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
TRIM11Q96F44 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM11Q96F44 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
TRIM11Q96F44 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
TRIM11Q96F44 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
TRIM11Q96F44 KRT8P37-201ENST00000451609 1420 ntBASIC16.91■□□□□ 0.3
TRIM11Q96F44 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM11Q96F44 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM11Q96F44 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM11Q96F44 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.91■□□□□ 0.3
TRIM11Q96F44 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.91■□□□□ 0.3
TRIM11Q96F44 AC069335.1-201ENST00000489972 472 ntBASIC16.91■□□□□ 0.3
TRIM11Q96F44 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM11Q96F44 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
TRIM11Q96F44 SLC25A39P2-201ENST00000537614 270 ntBASIC16.91■□□□□ 0.3
TRIM11Q96F44 RARRES2P9-201ENST00000565168 469 ntBASIC16.91■□□□□ 0.3
TRIM11Q96F44 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.91■□□□□ 0.3
TRIM11Q96F44 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.91■□□□□ 0.3
TRIM11Q96F44 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.91■□□□□ 0.3
TRIM11Q96F44 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.91■□□□□ 0.3
TRIM11Q96F44 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM11Q96F44 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM11Q96F44 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM11Q96F44 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM11Q96F44 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM11Q96F44 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM11Q96F44 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.91■□□□□ 0.3
TRIM11Q96F44 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM11Q96F44 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM11Q96F44 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM11Q96F44 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM11Q96F44 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM11Q96F44 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM11Q96F44 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.91■□□□□ 0.3
TRIM11Q96F44 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM11Q96F44 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.9■□□□□ 0.3
TRIM11Q96F44 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM11Q96F44 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM11Q96F44 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.9■□□□□ 0.3
TRIM11Q96F44 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM11Q96F44 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.9■□□□□ 0.3
TRIM11Q96F44 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.9■□□□□ 0.3
TRIM11Q96F44 AP3S2-216ENST00000617003 1561 ntBASIC16.9■□□□□ 0.3
TRIM11Q96F44 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.9■□□□□ 0.3
TRIM11Q96F44 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM11Q96F44 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM11Q96F44 AC092850.2-201ENST00000623821 2697 ntBASIC16.9■□□□□ 0.3
TRIM11Q96F44 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM11Q96F44 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.9■□□□□ 0.3
TRIM11Q96F44 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
TRIM11Q96F44 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms