Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SCAMP4Q969E2 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
SCAMP4Q969E2 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.85■□□□□ 0.13
SCAMP4Q969E2 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SCAMP4Q969E2 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SCAMP4Q969E2 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.85■□□□□ 0.13
SCAMP4Q969E2 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SCAMP4Q969E2 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SCAMP4Q969E2 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.84■□□□□ 0.13
SCAMP4Q969E2 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
SCAMP4Q969E2 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
SCAMP4Q969E2 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.84■□□□□ 0.13
SCAMP4Q969E2 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
SCAMP4Q969E2 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SCAMP4Q969E2 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
SCAMP4Q969E2 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SCAMP4Q969E2 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SCAMP4Q969E2 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SCAMP4Q969E2 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SCAMP4Q969E2 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.84■□□□□ 0.13
SCAMP4Q969E2 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SCAMP4Q969E2 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.84■□□□□ 0.13
SCAMP4Q969E2 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.84■□□□□ 0.13
SCAMP4Q969E2 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
SCAMP4Q969E2 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
SCAMP4Q969E2 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.84■□□□□ 0.13
SCAMP4Q969E2 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.84■□□□□ 0.13
SCAMP4Q969E2 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
SCAMP4Q969E2 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
SCAMP4Q969E2 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.84■□□□□ 0.13
SCAMP4Q969E2 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SCAMP4Q969E2 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SCAMP4Q969E2 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SCAMP4Q969E2 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.84■□□□□ 0.13
SCAMP4Q969E2 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC15.84■□□□□ 0.13
SCAMP4Q969E2 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC15.84■□□□□ 0.13
SCAMP4Q969E2 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.84■□□□□ 0.13
SCAMP4Q969E2 OARD1-208ENST00000469104 704 ntTSL 2 BASIC15.84■□□□□ 0.13
SCAMP4Q969E2 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.84■□□□□ 0.13
SCAMP4Q969E2 SPDYE18-201ENST00000510091 1050 ntBASIC15.84■□□□□ 0.13
SCAMP4Q969E2 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC15.84■□□□□ 0.13
SCAMP4Q969E2 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.84■□□□□ 0.13
SCAMP4Q969E2 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC15.84■□□□□ 0.13
SCAMP4Q969E2 MIR3197-201ENST00000582241 73 ntBASIC15.84■□□□□ 0.13
SCAMP4Q969E2 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC15.84■□□□□ 0.13
SCAMP4Q969E2 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC15.84■□□□□ 0.13
SCAMP4Q969E2 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.84■□□□□ 0.13
SCAMP4Q969E2 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.84■□□□□ 0.13
SCAMP4Q969E2 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SCAMP4Q969E2 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
SCAMP4Q969E2 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.84■□□□□ 0.13
SCAMP4Q969E2 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SCAMP4Q969E2 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SCAMP4Q969E2 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SCAMP4Q969E2 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SCAMP4Q969E2 BTBD7P1-201ENST00000447253 1453 ntBASIC15.84■□□□□ 0.13
SCAMP4Q969E2 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.84■□□□□ 0.13
SCAMP4Q969E2 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.84■□□□□ 0.13
SCAMP4Q969E2 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SCAMP4Q969E2 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.84■□□□□ 0.13
SCAMP4Q969E2 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.83■□□□□ 0.13
SCAMP4Q969E2 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
SCAMP4Q969E2 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC15.83■□□□□ 0.13
SCAMP4Q969E2 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
SCAMP4Q969E2 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
SCAMP4Q969E2 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.83■□□□□ 0.13
SCAMP4Q969E2 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
SCAMP4Q969E2 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
SCAMP4Q969E2 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
SCAMP4Q969E2 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SCAMP4Q969E2 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.83■□□□□ 0.12
SCAMP4Q969E2 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.83■□□□□ 0.12
SCAMP4Q969E2 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.83■□□□□ 0.12
SCAMP4Q969E2 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
SCAMP4Q969E2 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SCAMP4Q969E2 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
SCAMP4Q969E2 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.83■□□□□ 0.12
SCAMP4Q969E2 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SCAMP4Q969E2 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SCAMP4Q969E2 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.83■□□□□ 0.12
SCAMP4Q969E2 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC15.83■□□□□ 0.12
SCAMP4Q969E2 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC15.83■□□□□ 0.12
SCAMP4Q969E2 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
SCAMP4Q969E2 GREM1-201ENST00000560677 623 ntTSL 4 BASIC15.83■□□□□ 0.12
SCAMP4Q969E2 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.83■□□□□ 0.12
SCAMP4Q969E2 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
SCAMP4Q969E2 AC008761.3-201ENST00000624803 892 ntBASIC15.83■□□□□ 0.12
SCAMP4Q969E2 AC004461.2-201ENST00000629517 803 ntBASIC15.83■□□□□ 0.12
SCAMP4Q969E2 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
SCAMP4Q969E2 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.83■□□□□ 0.12
SCAMP4Q969E2 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SCAMP4Q969E2 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SCAMP4Q969E2 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SCAMP4Q969E2 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SCAMP4Q969E2 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SCAMP4Q969E2 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.83■□□□□ 0.12
SCAMP4Q969E2 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SCAMP4Q969E2 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SCAMP4Q969E2 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SCAMP4Q969E2 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms