Protein–RNA interactions for Protein: Q8WXC6

COPS9, COP9 signalosome complex subunit 9, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS9Q8WXC6 GRHL2-201ENST00000251808 5239 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
COPS9Q8WXC6 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
COPS9Q8WXC6 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
COPS9Q8WXC6 BEND3P1-201ENST00000421591 1944 ntBASIC10.85□□□□□ -0.67
COPS9Q8WXC6 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
COPS9Q8WXC6 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
COPS9Q8WXC6 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
COPS9Q8WXC6 LRPAP1-202ENST00000500728 7819 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
COPS9Q8WXC6 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
COPS9Q8WXC6 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
COPS9Q8WXC6 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
COPS9Q8WXC6 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
COPS9Q8WXC6 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC10.85□□□□□ -0.67
COPS9Q8WXC6 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
COPS9Q8WXC6 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
COPS9Q8WXC6 ABR-202ENST00000302538 5289 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
COPS9Q8WXC6 HDLBP-214ENST00000427183 6238 ntTSL 2 BASIC10.85□□□□□ -0.67
COPS9Q8WXC6 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
COPS9Q8WXC6 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC10.84□□□□□ -0.67
COPS9Q8WXC6 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC10.84□□□□□ -0.67
COPS9Q8WXC6 CACNA1C-219ENST00000399649 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
COPS9Q8WXC6 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
COPS9Q8WXC6 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
COPS9Q8WXC6 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
COPS9Q8WXC6 PDE7B-201ENST00000308191 5390 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
COPS9Q8WXC6 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
COPS9Q8WXC6 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
COPS9Q8WXC6 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
COPS9Q8WXC6 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
COPS9Q8WXC6 ARHGAP23P1-201ENST00000562773 1937 ntBASIC10.84□□□□□ -0.67
COPS9Q8WXC6 AC011477.6-201ENST00000604980 1927 ntBASIC10.84□□□□□ -0.67
COPS9Q8WXC6 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
COPS9Q8WXC6 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
COPS9Q8WXC6 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC10.84□□□□□ -0.67
COPS9Q8WXC6 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
COPS9Q8WXC6 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
COPS9Q8WXC6 PCF11-201ENST00000298281 7677 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
COPS9Q8WXC6 TPO-203ENST00000346956 2923 ntTSL 5 BASIC10.84□□□□□ -0.67
COPS9Q8WXC6 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
COPS9Q8WXC6 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC10.84□□□□□ -0.67
COPS9Q8WXC6 PRKCE-201ENST00000306156 5650 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
COPS9Q8WXC6 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
COPS9Q8WXC6 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC10.84□□□□□ -0.67
COPS9Q8WXC6 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
COPS9Q8WXC6 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC10.84□□□□□ -0.67
COPS9Q8WXC6 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC10.84□□□□□ -0.67
COPS9Q8WXC6 HAUS4P1-201ENST00000406739 1145 ntBASIC10.84□□□□□ -0.67
COPS9Q8WXC6 ECEL1P3-201ENST00000427961 737 ntBASIC10.84□□□□□ -0.67
COPS9Q8WXC6 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC10.84□□□□□ -0.67
COPS9Q8WXC6 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC10.84□□□□□ -0.67
COPS9Q8WXC6 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC10.84□□□□□ -0.67
COPS9Q8WXC6 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC10.84□□□□□ -0.67
COPS9Q8WXC6 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC10.84□□□□□ -0.67
COPS9Q8WXC6 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC10.84□□□□□ -0.67
COPS9Q8WXC6 MPDU1-223ENST00000582151 728 ntBASIC10.84□□□□□ -0.67
COPS9Q8WXC6 AC140113.3-201ENST00000605663 199 ntBASIC10.84□□□□□ -0.67
COPS9Q8WXC6 AL049637.2-201ENST00000641778 930 ntBASIC10.84□□□□□ -0.67
COPS9Q8WXC6 AC243591.1-201ENST00000452967 1364 ntBASIC10.84□□□□□ -0.67
COPS9Q8WXC6 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
COPS9Q8WXC6 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
COPS9Q8WXC6 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
COPS9Q8WXC6 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC10.84□□□□□ -0.67
COPS9Q8WXC6 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
COPS9Q8WXC6 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
COPS9Q8WXC6 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC10.84□□□□□ -0.67
COPS9Q8WXC6 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
COPS9Q8WXC6 MRVI1-202ENST00000424001 5815 ntTSL 5 BASIC10.84□□□□□ -0.67
COPS9Q8WXC6 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
COPS9Q8WXC6 BRWD1-204ENST00000380800 7605 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
COPS9Q8WXC6 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
COPS9Q8WXC6 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
COPS9Q8WXC6 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
COPS9Q8WXC6 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
COPS9Q8WXC6 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
COPS9Q8WXC6 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
COPS9Q8WXC6 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
COPS9Q8WXC6 CNTNAP5-202ENST00000431078 5284 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
COPS9Q8WXC6 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
COPS9Q8WXC6 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC10.84□□□□□ -0.67
COPS9Q8WXC6 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
COPS9Q8WXC6 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
COPS9Q8WXC6 AC004817.3-201ENST00000602957 2129 ntBASIC10.84□□□□□ -0.67
COPS9Q8WXC6 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
COPS9Q8WXC6 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC10.84□□□□□ -0.67
COPS9Q8WXC6 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
COPS9Q8WXC6 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
COPS9Q8WXC6 MYH3-205ENST00000583535 6037 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.67
COPS9Q8WXC6 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.67
COPS9Q8WXC6 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
COPS9Q8WXC6 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC10.83□□□□□ -0.68
COPS9Q8WXC6 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
COPS9Q8WXC6 INHBA-201ENST00000242208 6064 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
COPS9Q8WXC6 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
COPS9Q8WXC6 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
COPS9Q8WXC6 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
COPS9Q8WXC6 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
COPS9Q8WXC6 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
COPS9Q8WXC6 SNX18-202ENST00000343017 3140 ntBASIC10.83□□□□□ -0.68
COPS9Q8WXC6 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
COPS9Q8WXC6 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC10.83□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms