Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC44A1Q8WWI5 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLC44A1Q8WWI5 LINC01101-201ENST00000622953 1884 ntBASIC16.05■□□□□ 0.16
SLC44A1Q8WWI5 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC44A1Q8WWI5 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.05■□□□□ 0.16
SLC44A1Q8WWI5 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC44A1Q8WWI5 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.05■□□□□ 0.16
SLC44A1Q8WWI5 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.05■□□□□ 0.16
SLC44A1Q8WWI5 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC44A1Q8WWI5 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC44A1Q8WWI5 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC44A1Q8WWI5 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
SLC44A1Q8WWI5 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC44A1Q8WWI5 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC44A1Q8WWI5 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLC44A1Q8WWI5 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.05■□□□□ 0.16
SLC44A1Q8WWI5 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC44A1Q8WWI5 AC025580.3-201ENST00000617932 1424 ntBASIC16.05■□□□□ 0.16
SLC44A1Q8WWI5 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
SLC44A1Q8WWI5 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC44A1Q8WWI5 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.05■□□□□ 0.16
SLC44A1Q8WWI5 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLC44A1Q8WWI5 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.05■□□□□ 0.16
SLC44A1Q8WWI5 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.05■□□□□ 0.16
SLC44A1Q8WWI5 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.05■□□□□ 0.16
SLC44A1Q8WWI5 AC061975.2-201ENST00000581722 295 ntBASIC16.05■□□□□ 0.16
SLC44A1Q8WWI5 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
SLC44A1Q8WWI5 AC073389.1-201ENST00000595595 795 ntBASIC16.05■□□□□ 0.16
SLC44A1Q8WWI5 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
SLC44A1Q8WWI5 AL031008.1-201ENST00000619963 541 ntBASIC16.05■□□□□ 0.16
SLC44A1Q8WWI5 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.05■□□□□ 0.16
SLC44A1Q8WWI5 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC44A1Q8WWI5 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC44A1Q8WWI5 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.05■□□□□ 0.16
SLC44A1Q8WWI5 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC16.05■□□□□ 0.16
SLC44A1Q8WWI5 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC44A1Q8WWI5 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC44A1Q8WWI5 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLC44A1Q8WWI5 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC44A1Q8WWI5 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.05■□□□□ 0.16
SLC44A1Q8WWI5 GSN-215ENST00000545652 2428 ntTSL 2 BASIC16.05■□□□□ 0.16
SLC44A1Q8WWI5 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC44A1Q8WWI5 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLC44A1Q8WWI5 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC44A1Q8WWI5 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.05■□□□□ 0.16
SLC44A1Q8WWI5 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC44A1Q8WWI5 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC44A1Q8WWI5 AC126365.1-201ENST00000578585 1514 ntBASIC16.04■□□□□ 0.16
SLC44A1Q8WWI5 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC44A1Q8WWI5 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC44A1Q8WWI5 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SLC44A1Q8WWI5 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
SLC44A1Q8WWI5 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC44A1Q8WWI5 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
SLC44A1Q8WWI5 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC44A1Q8WWI5 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC44A1Q8WWI5 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC16.04■□□□□ 0.16
SLC44A1Q8WWI5 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC44A1Q8WWI5 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.04■□□□□ 0.16
SLC44A1Q8WWI5 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC44A1Q8WWI5 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.04■□□□□ 0.16
SLC44A1Q8WWI5 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.04■□□□□ 0.16
SLC44A1Q8WWI5 AC127383.1-201ENST00000444697 1800 ntBASIC16.04■□□□□ 0.16
SLC44A1Q8WWI5 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
SLC44A1Q8WWI5 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC44A1Q8WWI5 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC44A1Q8WWI5 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.04■□□□□ 0.16
SLC44A1Q8WWI5 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC44A1Q8WWI5 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.04■□□□□ 0.16
SLC44A1Q8WWI5 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.04■□□□□ 0.16
SLC44A1Q8WWI5 AL161645.1-201ENST00000622716 1255 ntBASIC16.04■□□□□ 0.16
SLC44A1Q8WWI5 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC44A1Q8WWI5 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.04■□□□□ 0.16
SLC44A1Q8WWI5 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.04■□□□□ 0.16
SLC44A1Q8WWI5 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
SLC44A1Q8WWI5 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
SLC44A1Q8WWI5 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SLC44A1Q8WWI5 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC44A1Q8WWI5 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC44A1Q8WWI5 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC44A1Q8WWI5 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC44A1Q8WWI5 REXO1L1P-202ENST00000608646 1974 ntBASIC16.04■□□□□ 0.16
SLC44A1Q8WWI5 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC44A1Q8WWI5 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
SLC44A1Q8WWI5 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SLC44A1Q8WWI5 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SLC44A1Q8WWI5 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SLC44A1Q8WWI5 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
SLC44A1Q8WWI5 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
SLC44A1Q8WWI5 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC44A1Q8WWI5 GSN-203ENST00000373808 2664 ntTSL 2 BASIC16.03■□□□□ 0.16
SLC44A1Q8WWI5 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC44A1Q8WWI5 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC44A1Q8WWI5 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC16.03■□□□□ 0.16
SLC44A1Q8WWI5 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.03■□□□□ 0.16
SLC44A1Q8WWI5 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.03■□□□□ 0.16
SLC44A1Q8WWI5 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC44A1Q8WWI5 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC44A1Q8WWI5 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SLC44A1Q8WWI5 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms