Protein–RNA interactions for Protein: Q8WUE5

CT55, Cancer/testis antigen 55, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CT55Q8WUE5 KLF2P4-201ENST00000451959 1225 ntBASIC14.8□□□□□ -0.04
CT55Q8WUE5 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.8□□□□□ -0.04
CT55Q8WUE5 AC022494.1-201ENST00000466044 728 ntBASIC14.8□□□□□ -0.04
CT55Q8WUE5 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CT55Q8WUE5 BCRP6-201ENST00000510112 632 ntBASIC14.8□□□□□ -0.04
CT55Q8WUE5 BCRP7-201ENST00000511549 544 ntBASIC14.8□□□□□ -0.04
CT55Q8WUE5 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC14.8□□□□□ -0.04
CT55Q8WUE5 MFF-223ENST00000524634 647 ntTSL 2 BASIC14.8□□□□□ -0.04
CT55Q8WUE5 RPL28-207ENST00000558815 616 ntTSL 2 BASIC14.8□□□□□ -0.04
CT55Q8WUE5 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.8□□□□□ -0.04
CT55Q8WUE5 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.8□□□□□ -0.04
CT55Q8WUE5 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.8□□□□□ -0.04
CT55Q8WUE5 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CT55Q8WUE5 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC14.8□□□□□ -0.04
CT55Q8WUE5 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CT55Q8WUE5 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CT55Q8WUE5 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CT55Q8WUE5 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CT55Q8WUE5 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.8□□□□□ -0.04
CT55Q8WUE5 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CT55Q8WUE5 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC14.8□□□□□ -0.04
CT55Q8WUE5 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CT55Q8WUE5 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
CT55Q8WUE5 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CT55Q8WUE5 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC14.8□□□□□ -0.04
CT55Q8WUE5 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CT55Q8WUE5 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC14.8□□□□□ -0.04
CT55Q8WUE5 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CT55Q8WUE5 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CT55Q8WUE5 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CT55Q8WUE5 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CT55Q8WUE5 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CT55Q8WUE5 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.79□□□□□ -0.04
CT55Q8WUE5 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CT55Q8WUE5 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.79□□□□□ -0.04
CT55Q8WUE5 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CT55Q8WUE5 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CT55Q8WUE5 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CT55Q8WUE5 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CT55Q8WUE5 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CT55Q8WUE5 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CT55Q8WUE5 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CT55Q8WUE5 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CT55Q8WUE5 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.79□□□□□ -0.04
CT55Q8WUE5 AGGF1P2-201ENST00000426656 2106 ntBASIC14.79□□□□□ -0.04
CT55Q8WUE5 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CT55Q8WUE5 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CT55Q8WUE5 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC14.79□□□□□ -0.04
CT55Q8WUE5 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CT55Q8WUE5 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CT55Q8WUE5 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.79□□□□□ -0.04
CT55Q8WUE5 AC068587.3-201ENST00000526613 355 ntBASIC14.79□□□□□ -0.04
CT55Q8WUE5 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CT55Q8WUE5 PTP4A1P2-201ENST00000546033 454 ntBASIC14.79□□□□□ -0.04
CT55Q8WUE5 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC14.79□□□□□ -0.04
CT55Q8WUE5 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC14.79□□□□□ -0.04
CT55Q8WUE5 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC14.79□□□□□ -0.04
CT55Q8WUE5 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC14.79□□□□□ -0.04
CT55Q8WUE5 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.79□□□□□ -0.04
CT55Q8WUE5 REXO1L6P-201ENST00000603433 1515 ntBASIC14.79□□□□□ -0.04
CT55Q8WUE5 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.79□□□□□ -0.04
CT55Q8WUE5 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CT55Q8WUE5 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CT55Q8WUE5 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CT55Q8WUE5 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CT55Q8WUE5 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CT55Q8WUE5 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CT55Q8WUE5 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CT55Q8WUE5 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.78□□□□□ -0.04
CT55Q8WUE5 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CT55Q8WUE5 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.78□□□□□ -0.04
CT55Q8WUE5 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CT55Q8WUE5 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC14.78□□□□□ -0.04
CT55Q8WUE5 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.78□□□□□ -0.04
CT55Q8WUE5 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CT55Q8WUE5 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CT55Q8WUE5 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.78□□□□□ -0.04
CT55Q8WUE5 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CT55Q8WUE5 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CT55Q8WUE5 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CT55Q8WUE5 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CT55Q8WUE5 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CT55Q8WUE5 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CT55Q8WUE5 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.78□□□□□ -0.04
CT55Q8WUE5 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CT55Q8WUE5 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CT55Q8WUE5 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
CT55Q8WUE5 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CT55Q8WUE5 STX1A-203ENST00000395155 783 ntTSL 2 BASIC14.78□□□□□ -0.04
CT55Q8WUE5 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CT55Q8WUE5 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC14.78□□□□□ -0.04
CT55Q8WUE5 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.78□□□□□ -0.04
CT55Q8WUE5 KRT18P43-201ENST00000469825 1281 ntBASIC14.78□□□□□ -0.04
CT55Q8WUE5 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CT55Q8WUE5 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.78□□□□□ -0.04
CT55Q8WUE5 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.78□□□□□ -0.04
CT55Q8WUE5 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.78□□□□□ -0.04
CT55Q8WUE5 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.78□□□□□ -0.04
CT55Q8WUE5 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC14.78□□□□□ -0.04
CT55Q8WUE5 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms